prot_H-paniculata_contig16213.3577.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16213.3577.1
Unique Nameprot_H-paniculata_contig16213.3577.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length37
Homology
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BLAST of mRNA_H-paniculata_contig16213.3577.1 vs. uniprot
Match: D7G4V6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V6_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 8.460e-8
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0 
Query:    3 RVLKPGQHYEVGLELSMPTSPINRRVGVFMV 33
            +VLK GQHY+VGLEL MPTS INRR+GVFMV
Sbjct:   90 KVLKAGQHYKVGLELQMPTSYINRRIGVFMV 120
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BLAST of mRNA_H-paniculata_contig16213.3577.1 vs. uniprot
Match: A0A6H5JEL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL4_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 3.380e-7
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0 
Query:    3 RVLKPGQHYEVGLELSMPTSPINRRVGVFMV 33
            +VL  GQHY+VGLEL MPTS INRRVGVFMV
Sbjct:  170 KVLNAGQHYKVGLELQMPTSYINRRVGVFMV 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16213.3577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4V6_ECTSI8.460e-880.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEL4_9PHAE3.380e-780.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009617Seipin familyPFAMPF06775Seipincoord: 3..34
e-value: 2.1E-9
score: 37.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16213contigH-paniculata_contig16213:5582..5692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16213.3577.1mRNA_H-paniculata_contig16213.3577.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16213 5582..5692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16213.3577.1 ID=prot_H-paniculata_contig16213.3577.1|Name=mRNA_H-paniculata_contig16213.3577.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=37bp
RCRVLKPGQHYEVGLELSMPTSPINRRVGVFMVSKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009617Seipin