prot_H-paniculata_contig1618.3562.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1618.3562.1
Unique Nameprot_H-paniculata_contig1618.3562.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length99
Homology
BLAST of mRNA_H-paniculata_contig1618.3562.1 vs. uniprot
Match: A0A151T8W3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T8W3_CAJCA)

HSP 1 Score: 70.1 bits (170), Expect = 2.250e-12
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 0
Query:   11 VEPKNHREAQASPEGEHWQRAEKVEMQGLIDNGVWTQVERPSNKLVVSTMMLYKIKIGEEGNVEKYKCSLIAHGYHQIKGVHFQEASSP 99
            VEPKN ++A A+   + W  A K E   L+DNG WT V  PSN++ +    ++ IK   +G V KYK  L+A G+HQ  G  + +  SP
Sbjct:   23 VEPKNTKQALAN---DTWLAAMKQEYNALLDNGTWTLVSLPSNRIAIGCKWVFCIKENPDGTVHKYKARLVAKGFHQQYGYDYNKTFSP 108          
BLAST of mRNA_H-paniculata_contig1618.3562.1 vs. uniprot
Match: A0A6L2P9M1_TANCI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2P9M1_TANCI)

HSP 1 Score: 69.7 bits (169), Expect = 8.780e-12
Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 0
Query:   12 EPKNHREAQASPEGEHWQRAEKVEMQGLIDNGVWTQVERPSNKLVVSTMMLYKIKIGEEGNVEKYKCSLIAHGYHQIKGVHFQEASSP 99
            EP +++ A  +P+   W  A   EMQ +IDN VW  V+ P N   V +   +K K   +G V  YK  L+A GY Q+ GVH++E  SP
Sbjct:  242 EPTSYKAAMLNPKYNKWLDAMNAEMQSMIDNKVWVLVDLPPNCTTVRSKWFFKKKTNMDGIVHTYKACLVAKGYTQLYGVHYEETFSP 329          
BLAST of mRNA_H-paniculata_contig1618.3562.1 vs. uniprot
Match: A0A2N5SCW9_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5SCW9_9BASI)

HSP 1 Score: 69.3 bits (168), Expect = 1.250e-11
Identity = 35/93 (37.63%), Postives = 52/93 (55.91%), Query Frame = 0
Query:    7 SDLPVEPKNHREAQASPEGEHWQRAEKVEMQGLIDNGVWTQVERPSNKLVVSTMMLYKIKIGEEGNVEKYKCSLIAHGYHQIKGVHFQEASSP 99
            S  P  PK +R A +SPE   W  A K+E+  ++  GVWT V  PSN  ++ T+ +++ K    GN+ K+K  L A G  Q +G+ F E  +P
Sbjct:  850 STSPSVPKTYRSAMSSPEAAEWSSAIKLELDAMVQLGVWTVVPIPSNHHLLGTIWVFRKKYDANGNLMKFKARLCAQGSAQQEGIDFNETYAP 942          
BLAST of mRNA_H-paniculata_contig1618.3562.1 vs. uniprot
Match: A0A6G0J2S8_LARCR (Copia protein Gag-int-pol protein Copia VLP protein Copia protease n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0J2S8_LARCR)

HSP 1 Score: 68.6 bits (166), Expect = 2.220e-11
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 0
Query:   12 EPKNHREAQASPEGEHWQRAEKVEMQGLIDNGVWTQVERPSNKLVVSTMMLYKIKIGEEGNVEKYKCSLIAHGYHQIKGVHFQEASSP 99
            EP   +EA  S   + W+ A  +E + L++N  W  VE P ++  +    ++K+K   +G VE+YKC L+A GY Q  GV + E  SP
Sbjct:  136 EPTTMKEAMLSSNAKEWKEAADLEYESLLENETWDLVELPKDRKPIGQRWVFKVKHHSDGEVERYKCRLVAKGYSQNYGVDYDETFSP 223          
BLAST of mRNA_H-paniculata_contig1618.3562.1 vs. uniprot
Match: A0A6G0HFF8_LARCR (Copia protein Gag-int-pol protein Copia VLP protein Copia protease n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HFF8_LARCR)

HSP 1 Score: 67.0 bits (162), Expect = 7.630e-11
Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 0
Query:   17 REAQASPEGEHWQRAEKVEMQGLIDNGVWTQVERPSNKLVVSTMMLYKIKIGEEGNVEKYKCSLIAHGYHQIKGVHFQEASSP 99
            +EA  S   + W+ A  +E + L++N  W  VE P ++  + +  ++K+K   +G VE+YKC L+A GY Q  GV + E  SP
Sbjct:    2 KEAMLSSNAKEWKEAADLEYESLLENETWDLVELPKDRKPIGSRWVFKVKHHSDGEVERYKCRLVAKGYSQNYGVDYDETFSP 84          
BLAST of mRNA_H-paniculata_contig1618.3562.1 vs. uniprot
Match: A0A6P6FQ10_ZIZJJ (LOW QUALITY PROTEIN: ABC transporter A family member 12-like n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P6FQ10_ZIZJJ)

HSP 1 Score: 66.6 bits (161), Expect = 1.110e-10
Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 0
Query:   13 PKNHREAQASPEGEHWQRAEKVEMQGLIDNGVWTQVERPSNKLVVSTMMLYKIKIGEEGNVEKYKCSLIAHGYHQIKGVHFQEASSP 99
            PK+ + A   PE   W  A   E+  L  N  W  V RP N  VVS+  +Y++K  E G++++YK  L+A GY QI+G+H+ E  SP
Sbjct:  389 PKSVKTALTLPE---WHNAMLEELSALHTNATWVLVPRPVNVNVVSSKWVYRVKYKEYGSLDRYKARLVAKGYTQIEGLHYDETFSP 472          
BLAST of mRNA_H-paniculata_contig1618.3562.1 vs. uniprot
Match: A0A438BYU3_VITVI (Retrovirus-related Pol polyprotein from transposon RE2 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BYU3_VITVI)

HSP 1 Score: 65.1 bits (157), Expect = 1.280e-10
Identity = 30/72 (41.67%), Postives = 41/72 (56.94%), Query Frame = 0
Query:   28 WQRAEKVEMQGLIDNGVWTQVERPSNKLVVSTMMLYKIKIGEEGNVEKYKCSLIAHGYHQIKGVHFQEASSP 99
            WQ A   E+Q L +N  W+    P++K  +    LYKIK   +G +E YK  L+A GY QI+GVH+ E   P
Sbjct:  105 WQEAMHFEIQALEENNTWSLTPLPASKKPIGCKWLYKIKYKSDGRIECYKAHLVAKGYAQIEGVHYNEIFPP 176          
BLAST of mRNA_H-paniculata_contig1618.3562.1 vs. uniprot
Match: A0A0A9Y7J8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y7J8_LYGHE)

HSP 1 Score: 63.9 bits (154), Expect = 2.000e-10
Identity = 31/84 (36.90%), Postives = 47/84 (55.95%), Query Frame = 0
Query:   12 EPKNHREAQASPEGEHWQRAEKVEMQGLIDNGVWTQVERPSNKLVVSTMMLYKIKIGEEGNVEKYKCSLIAHGYHQIKGVHFQE 95
            +P   ++A  SP  E W++A   E   L  N  WT V+RP  K VV +  +++ K+  +G VE+ K  L+A G+ QI G H+ E
Sbjct:   16 DPMTPKQALESPYAEDWKKAMLEEYNSLEKNKTWTLVDRPEGKTVVGSRWVFRTKLKADGTVERRKARLVAKGFTQIPGTHYNE 99          
BLAST of mRNA_H-paniculata_contig1618.3562.1 vs. uniprot
Match: A0A087GCA0_ARAAL (Uncharacterized protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087GCA0_ARAAL)

HSP 1 Score: 65.5 bits (158), Expect = 2.820e-10
Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 0
Query:   26 EHWQRAEKVEMQGLIDNGVWTQVERPSNKLVVSTMMLYKIKIGEEGNVEKYKCSLIAHGYHQIKGVHFQEASSP 99
            E W++A + E+  + +N  W  VE P    V+    ++K K+ E G+++K+K  L+A GYHQ +GV F E  +P
Sbjct:  226 EVWRKAMEAEISSIEENNTWELVELPEGAKVIGVKWIFKTKLNENGDIDKFKARLVAKGYHQKQGVDFHEVFAP 299          
BLAST of mRNA_H-paniculata_contig1618.3562.1 vs. uniprot
Match: A5BSZ5_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BSZ5_VITVI)

HSP 1 Score: 65.1 bits (157), Expect = 3.420e-10
Identity = 30/72 (41.67%), Postives = 41/72 (56.94%), Query Frame = 0
Query:   28 WQRAEKVEMQGLIDNGVWTQVERPSNKLVVSTMMLYKIKIGEEGNVEKYKCSLIAHGYHQIKGVHFQEASSP 99
            WQ A   E+Q L +N  W+    P++K  +    LYKIK   +G +E YK  L+A GY QI+GVH+ E   P
Sbjct:  275 WQEAMHFEIQALEENNTWSLTPLPASKKPIGCKWLYKIKYKSDGRIECYKAHLVAKGYAQIEGVHYNEIFPP 346          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1618.3562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151T8W3_CAJCA2.250e-1240.45Retrovirus-related Pol polyprotein from transposon... [more]
A0A6L2P9M1_TANCI8.780e-1239.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N5SCW9_9BASI1.250e-1137.63Integrase catalytic domain-containing protein n=2 ... [more]
A0A6G0J2S8_LARCR2.220e-1136.36Copia protein Gag-int-pol protein Copia VLP protei... [more]
A0A6G0HFF8_LARCR7.630e-1136.14Copia protein Gag-int-pol protein Copia VLP protei... [more]
A0A6P6FQ10_ZIZJJ1.110e-1040.23LOW QUALITY PROTEIN: ABC transporter A family memb... [more]
A0A438BYU3_VITVI1.280e-1041.67Retrovirus-related Pol polyprotein from transposon... [more]
A0A0A9Y7J8_LYGHE2.000e-1036.90Retrovirus-related Pol polyprotein from transposon... [more]
A0A087GCA0_ARAAL2.820e-1036.49Uncharacterized protein n=1 Tax=Arabis alpina TaxI... [more]
A5BSZ5_VITVI3.420e-1041.67Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 44..99
e-value: 4.1E-8
score: 33.2
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 10..99
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 10..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1618contigH-paniculata_contig1618:24974..25270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1618.3562.1mRNA_H-paniculata_contig1618.3562.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1618 24974..25270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1618.3562.1 ID=prot_H-paniculata_contig1618.3562.1|Name=mRNA_H-paniculata_contig1618.3562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
MPEELRSDLPVEPKNHREAQASPEGEHWQRAEKVEMQGLIDNGVWTQVER
PSNKLVVSTMMLYKIKIGEEGNVEKYKCSLIAHGYHQIKGVHFQEASSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like