prot_H-paniculata_contig16176.3557.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16176.3557.1
Unique Nameprot_H-paniculata_contig16176.3557.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length132
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16176.3557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 110..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..89
NoneNo IPR availableTMHMMTMhelixcoord: 11..33
NoneNo IPR availableTMHMMTMhelixcoord: 87..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16176contigH-paniculata_contig16176:5528..5923 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16176.3557.1mRNA_H-paniculata_contig16176.3557.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16176 5430..5923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16176.3557.1 ID=prot_H-paniculata_contig16176.3557.1|Name=mRNA_H-paniculata_contig16176.3557.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp
MHSLGEEVHNYTSVFNLCALGTYAGLVCNSVIALQHLCQQPRRLLCLLSV
GYNFGASARRRDAPYITCYTTSTLPLQNIRYWRLFNVHRLFICCLFTYAS
SLLFLRYSAYSTVQDQHTAKERVTTDLRPNG*
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