prot_H-paniculata_contig16163.3553.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16163.3553.1
Unique Nameprot_H-paniculata_contig16163.3553.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length141
Homology
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BLAST of mRNA_H-paniculata_contig16163.3553.1 vs. uniprot
Match: D8LKD1_ECTSI (Aardvark n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD1_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 1.790e-40
Identity = 82/123 (66.67%), Postives = 104/123 (84.55%), Query Frame = 0 
Query:    1 MAAAVVARGGIVADSKDGWLRKASALLKLVALACPIVKKGVGLLGKALQLADRTRMVDYLEQVAKASKNATHVSLVAEQTVRRLV-ETGRAEASECAKSLDALQAMENPSNEWLPAWLLEEAS 122
            +AAAVVARGGIVA+SKDGWLRKASAL+++V LACP +K GV LLGKALQLA+R +M D++E VAK+S++  HVS +AEQT  RLV E GRAEA E  KSL+A++ +E+P++EWLP WLLEEA+
Sbjct:  910 IAAAVVARGGIVAESKDGWLRKASALVRIVCLACPSIKPGVELLGKALQLAERDKMADHVEHVAKSSRSPRHVSSLAEQTALRLVFEEGRAEADE--KSLEAMRRLEHPTDEWLPVWLLEEAA 1030
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16163.3553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKD1_ECTSI1.790e-4066.67Aardvark n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16163contigH-paniculata_contig16163:580..4177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16163.3553.1mRNA_H-paniculata_contig16163.3553.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16163 520..4225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16163.3553.1 ID=prot_H-paniculata_contig16163.3553.1|Name=mRNA_H-paniculata_contig16163.3553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=141bp
MAAAVVARGGIVADSKDGWLRKASALLKLVALACPIVKKGVGLLGKALQL
ADRTRMVDYLEQVAKASKNATHVSLVAEQTVRRLVETGRAEASECAKSLD
ALQAMENPSNEWLPAWLLEEASDDAANAPSADSECLLTSR*
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