prot_H-paniculata_contig1573.3326.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1573.3326.1
Unique Nameprot_H-paniculata_contig1573.3326.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length321
Homology
BLAST of mRNA_H-paniculata_contig1573.3326.1 vs. uniprot
Match: D8LS23_ECTSI (HNH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS23_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 1.890e-101
Identity = 168/307 (54.72%), Postives = 196/307 (63.84%), Query Frame = 0
Query:    1 MRAFVEPYIFISI----SRWIHLYTPPCG-------SSNSVTSRVTCSLARDSKCLG-----LDSVKCNVSDIREQLKRRGYTPTGVR-TKAGVLGELIGLVRAEGFAPPHSV----------------EGNLRQRRNQHAGFVDRTTMETGPRGFPLCRFCQQETPSKMRTFCSNGCVHEHKIRSQGSYVRKCLSTRDGGQCAECGADAGGLYKRARQAWISEKLPLLRTSAVVQAVAGTPFEGMVPRAGSNARPTSGEFWHADHIVPVVLGGGQCGLNNFRTLCVPCHKASTKRLARERALSRRR 274
            MRAFV P I  SI     R + +     G       +++S T +   S    +  L      LD   C V+DIR+QL+RRGYTP   R TKA +L EL GLVRAEGFAPP +V                +G  +QR N  AG+VDR TME G RG+PLCRFC +E PS  RTFCS+ CVHEH+IR+QGSYVRKCL  RDGGQCAECG DA GLYKRAR AWI E   +++  AV   + GTPFEG +P  G   RPT G+FWHADHIVPVV GGGQC L N+RTLCVPCH A+TKRLA ERA  R R
Sbjct:    1 MRAFVAPTILFSIVRRSCRGLAVGASAAGRLPGCRTTASSCTVKRAASTETAATSLSGWPRRLDPDNCKVADIRQQLRRRGYTPPRDRQTKAALLEELRGLVRAEGFAPPDAVVRNDTVTREGPEGSEGDGKAQQRWNPEAGWVDRATMERGERGYPLCRFCNEEVPSARRTFCSDACVHEHRIRTQGSYVRKCLLVRDGGQCAECGVDAAGLYKRARAAWICEGSVVVKREAVALEMVGTPFEGKMPTKGMTRRPTQGKFWHADHIVPVVRGGGQCSLKNYRTLCVPCHAAATKRLAGERAAERAR 307          
BLAST of mRNA_H-paniculata_contig1573.3326.1 vs. uniprot
Match: A0A6H5JVH0_9PHAE (HNH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH0_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 1.890e-74
Identity = 108/161 (67.08%), Postives = 121/161 (75.16%), Query Frame = 0
Query:  116 METGPRGFPLCRFCQQETPSKMRTFCSNGCVHEHKIRSQGSYVRKCLSTRDGGQCAECGADAGGLYKRARQAWISEKLPLLRTSAVVQAVAGTPFEGMVPRAGSNARPTSGEFWHADHIVPVVLGGGQCGLNNFRTLCVPCHKASTKRLARERALSRRREA 276
            ME G RG+PLCRFC +E PS  RTFCS+ CVHEH+IR+QGSYVRKCL  RDGGQCAECG DA GLYKRAR AWI     + +  AV   + GTPFEG +P  G   RPT G+FWHADHIVPVV GGGQC L N+RTLCVPCH A+T+RLA ERA  R R A
Sbjct:    1 MERGGRGYPLCRFCNEEVPSARRTFCSDACVHEHRIRTQGSYVRKCLLVRDGGQCAECGVDAAGLYKRARAAWICGGSVVAKREAVALEMVGTPFEGKIPTKGMTRRPTQGKFWHADHIVPVVRGGGQCSLKNYRTLCVPCHAAATRRLAGERAAERARAA 161          
BLAST of mRNA_H-paniculata_contig1573.3326.1 vs. uniprot
Match: A0A4D9D4K6_9STRA (HNH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4K6_9STRA)

HSP 1 Score: 160 bits (405), Expect = 6.810e-41
Identity = 104/259 (40.15%), Postives = 127/259 (49.03%), Query Frame = 0
Query:   55 SDIREQLKRRGYTPTGVRTKAGVLGELIGLVRAEGFA--PPHSVEGNLRQRRNQHAGFVDRTTMETGPRGFPLCRFCQQETPSKMRTFCSNGCVHEHKIRSQGSYVRKCLSTRDGGQCAECGADAGGLYKRARQA-WIS----------EKLPLLRTSAVVQAVAGTPFEGMV-------------------------------PRAGSNARP-TSGEFWHADHIVPVVLGGGQCGLNNFRTLCVPCHKASTKRLARER 268
            +++R  L+  G   TG RTKA +   L   +RA   A  P HS +     R +   G V++  +  G  G  LCR CQQE P K  TFCS  CVHEH++R+ GSYVRKCL  RD G+CA C  DA  LY + R+  W +          EK      + V + VAGT  EG V                               PR     RP  SG FWHADHI+PVV GGG  GL NFRTLCV CH+ +T  L R R
Sbjct:  324 AELRAHLRAMGMPATG-RTKAQLATRLHACLRARRLANFPSHSTD-----RYSDRRGKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLQVRRTCWAAGWGGRDRGKGEKALGGIQAVVDEKVAGTVLEGKVKVQGLKQGKCQVGDGVGKDWVTSTVYGAQTRPRPRRRRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATAELRRRR 576          
BLAST of mRNA_H-paniculata_contig1573.3326.1 vs. uniprot
Match: K8YUI5_NANGC (Hnh endonuclease (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUI5_NANGC)

HSP 1 Score: 140 bits (354), Expect = 3.050e-36
Identity = 96/239 (40.17%), Postives = 116/239 (48.54%), Query Frame = 0
Query:   55 SDIREQLKRRGYTPTGVRTKAGVLGELIGLVRAEGFA--PPHSVEGNLRQRRNQHAGFVDRTTMETGPRGFPLCRFCQQETPSKMRTFCSNGCVHEHKIRSQGSYVRKCLSTRDGGQCAECGADAGGLYKRARQA-WIS------EKLPLLRTSAVVQAVAGTPFEGMV-------------------------------PRAGSNARP-TSGEFWHADHIVPVVLGGGQCGLNNFRTL 252
            +++R  L+  G   TG RTKA +   L   +RA   A  P HS +     R +   G V++  +  G  G  LCR CQQE P K  TFCS  CVHEH++R+ GSYVRKCL  RD G+CA C  DA  LY   R+  W +      EK      + V + VAGT  EG V                               PR     RP  SG FWHADHI+PVV GGG  GL NFRTL
Sbjct:   29 AELRAHLRALGVPATG-RTKAQLAIRLHACLRARRLANFPSHSTD-----RYSDRRGKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCTIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTL 261          
BLAST of mRNA_H-paniculata_contig1573.3326.1 vs. uniprot
Match: A0A5M8SK72_9BACT (HNH endonuclease n=1 Tax=Acidobacteria bacterium AB60 TaxID=1230846 RepID=A0A5M8SK72_9BACT)

HSP 1 Score: 119 bits (299), Expect = 1.650e-29
Identity = 66/165 (40.00%), Postives = 84/165 (50.91%), Query Frame = 0
Query:  109 GFVDRTTMETGPRGFPLCRFCQQETPSKMRTFCSNGCVHEHKIRSQGSYVRKCLSTRDGGQCAECGADAGGLYKRARQAWISEKLPLLRTSAVVQAVAGTPFEGMVPRAGSNARPTSGEFWHADHIVPVVLGGGQCGLNNFRTLCVPCHKASTKRLARERALSRR 273
            G+VDR  +  GP G  LCR+C  E P    TFCS  CVHE K+R+Q  YVR+ +  RD G C+ C  D     +R R +                   G     ++   G  A  T    W ADHI+PV+ GGGQC LNN RTLC+ CH+A+T  L R    +RR
Sbjct:    4 GWVDRKAVPRGPNGRGLCRWCSLEVPKGRYTFCSEDCVHEWKLRTQPGYVREQVFKRDKGFCSSCRLDTLAEARRLRYS------------------RGAARRALLEHWGLKAY-TRKSLWDADHIIPVIEGGGQCDLNNLRTLCLLCHRAATLELRRRIVAARR 149          
BLAST of mRNA_H-paniculata_contig1573.3326.1 vs. uniprot
Match: UPI00131E5CA1 (HNH endonuclease n=1 Tax=Granulicella sp. S156 TaxID=1747224 RepID=UPI00131E5CA1)

HSP 1 Score: 115 bits (288), Expect = 8.080e-28
Identity = 67/169 (39.64%), Postives = 85/169 (50.30%), Query Frame = 0
Query:  100 LRQRRNQHAGFVDRTTMETGPRGFPLCRFCQQETPSKMR-TFCSNGCVHEHKIRSQGSYVRKCLSTRDGGQCAECGADAGGLY---KRARQAWISEKLPLLRTSAVVQAVAGTPFEGMVPRAGSNARPTSGEFWHADHIVPVVLGGGQCGLNNFRTLCVPCHKASTKRL 264
            L  R    AG   RT +  GP G PLCR+CQ E  ++ R TFCS  CVH+ ++RS   Y+R  +  RD G C  CG D    Y   KR+R    +E L L     V                   AR +    W ADH++PV  GGGQC L+N RTLC+PCH+ +T  L
Sbjct:    4 LPSRILSEAGHAHRTALPVGPNGLPLCRWCQLEILARRRRTFCSEYCVHQWRLRSDPGYLRDQVFARDRGICTACGTDTVAAYATLKRSRGKARAEALALWGLKTV------------------QARRS---LWDADHVLPVAEGGGQCDLDNIRTLCLPCHREATADL 151          
BLAST of mRNA_H-paniculata_contig1573.3326.1 vs. uniprot
Match: A0A7S4FBB3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FBB3_CHRCT)

HSP 1 Score: 119 bits (297), Expect = 1.730e-27
Identity = 79/232 (34.05%), Postives = 108/232 (46.55%), Query Frame = 0
Query:   55 SDIREQLKRRGYTPTGVRTKAGVLGELIGLVRAEGF--APPHSVEGNLRQRRNQHAGFVDRTTMETGPRGFPLCRFCQQETPSKMRTFCSNGCVHEHKIRSQGSYVRKCLSTRDGGQCAECGADAGGLYKRARQAWISEKL-----PLLRTSAVVQAVAGTPFEGMVPRA------GSNARPTSGEFWHADHIVPVVLGGGQCGLNNFRTLCVPCHKASTKRLARERALSRR 273
            S IR +L++ G    G   K  ++  L+   RAE    A P ++     +  ++ AG ++    E        CR C +      R+FC N C H H +R+ GSY+RK L  RD G C+ C  +A   Y   R    + +L     P   T   +   A +        A      G   R   G FW ADH++PV LGGG CGL N RTLC PCH + + R AR+RAL RR
Sbjct:   42 SAIRNELRQLGMK-AGSLNKTAMVCRLVRARRAESTIEAGPGNLASPPSRFDSERAGCIEGRLDE--------CRVCARSICPPRRSFCCNECAHSHLLRTDGSYLRKALLVRDAGVCSICQCNAERAYLEVRALLRAARLEDSTRPEEETLEDLLQNARSELRHFHGHARVSSGRGRRRRLKKGSFWQADHVLPVYLGGGSCGLRNLRTLCTPCHASVSARQARDRALGRR 264          
BLAST of mRNA_H-paniculata_contig1573.3326.1 vs. uniprot
Match: UPI001EF5F0AD (HNH endonuclease n=1 Tax=Occallatibacter savannae TaxID=1002691 RepID=UPI001EF5F0AD)

HSP 1 Score: 114 bits (285), Expect = 1.730e-27
Identity = 61/161 (37.89%), Postives = 87/161 (54.04%), Query Frame = 0
Query:  104 RNQHAGFVDRTTMETGPRGFPLCRFCQQETPSKMRTFCSNGCVHEHKIRSQGSYVRKCLSTRDGGQCAECGADAGGLYKRARQAWISEKLPLLRTSAVVQAVAGTPFEGMVPRAGSNARPTSGEFWHADHIVPVVLGGGQCGLNNFRTLCVPCHKASTKRL 264
            R    G+VDR ++  GP G  LCR+C  E P +  TFCS+ CVHE K+R+Q +Y+R+ +  RD G CA C  D     ++ R +  + +  LL               G+  R+  +        W ADHIVPV+ GGG+C L+N RTLC+ CH++ T  L
Sbjct:    2 RAMKGGWVDRGSVPRGPNGRGLCRWCSLEVPKRRFTFCSDYCVHEWKLRTQPAYLREKVFERDRGICASCSTDTLAAARKLRFSRGAARATLLM------------HWGLRTRSRKS-------LWDADHIVPVIEGGGECDLSNIRTLCLRCHRSETTAL 143          
BLAST of mRNA_H-paniculata_contig1573.3326.1 vs. uniprot
Match: A0A239JR82_9BACT (HNH endonuclease n=1 Tax=Granulicella rosea TaxID=474952 RepID=A0A239JR82_9BACT)

HSP 1 Score: 114 bits (285), Expect = 1.830e-27
Identity = 65/162 (40.12%), Postives = 86/162 (53.09%), Query Frame = 0
Query:  104 RNQHAGFVDRTTMETGPRGFPLCRFCQQETPSKMR-TFCSNGCVHEHKIRSQGSYVRKCLSTRDGGQCAECGADAGGLYKRARQAWISEKLPLLRTSAVVQAVAGTPFEGMVPRAGSNARPTSGEFWHADHIVPVVLGGGQCGLNNFRTLCVPCHKASTKRL 264
            R    G V+   +  GP G PLCR+C  E  +K R TFCS+ CVH+H++R+   Y+R  +  RD G CA C AD   +Y              L+ S      AG    GM      +AR +    W ADHI+PV  GGGQC L+N RTLC+PCH+ +T +L
Sbjct:    5 RTLPGGRVEPHILARGPNGLPLCRWCDLEILAKRRRTFCSDYCVHQHRLRTDPGYLRDQVFARDRGLCALCQADTVAIYAA------------LKRSRGAAREAGLSIYGMKT---IHARRS---LWDADHILPVAEGGGQCDLDNLRTLCLPCHREATAQL 148          
BLAST of mRNA_H-paniculata_contig1573.3326.1 vs. uniprot
Match: E8X0I7_GRATM (HNH endonuclease n=2 Tax=Granulicella TaxID=940557 RepID=E8X0I7_GRATM)

HSP 1 Score: 114 bits (285), Expect = 2.860e-27
Identity = 64/174 (36.78%), Postives = 90/174 (51.72%), Query Frame = 0
Query:   92 PPHSVEGNLRQRRNQHAGFVDRTTMETGPRGFPLCRFCQQETPSKMR-TFCSNGCVHEHKIRSQGSYVRKCLSTRDGGQCAECGADAGGLYKRARQAWISEKLPLLRTSAVVQAVAGTPFEGMVPRAGSNARPTSGEFWHADHIVPVVLGGGQCGLNNFRTLCVPCHKASTKRL 264
            PP +++G          G +    +  GP G PLCR+C+ E  +K R TFCS+ CVH+H++R+   Y+R  +  RD G CA C AD   +Y   ++A  + +L            AG    GM       +       W ADHI+PV  GGGQC L+N RTLC+PCH+  T +L
Sbjct:   19 PPRTLQG----------GRIKPKALPIGPLGKPLCRWCELEILAKRRRTFCSDYCVHQHRLRTDPGYLRDQVFARDHGLCALCQADTPAIYAALKRARGASRL------------AGLSLYGMKTITSRRS------LWDADHILPVAEGGGQCDLDNLRTLCLPCHREVTAQL 164          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1573.3326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS23_ECTSI1.890e-10154.72HNH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JVH0_9PHAE1.890e-7467.08HNH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A4D9D4K6_9STRA6.810e-4140.15HNH domain-containing protein n=2 Tax=Monodopsidac... [more]
K8YUI5_NANGC3.050e-3640.17Hnh endonuclease (Fragment) n=1 Tax=Nannochloropsi... [more]
A0A5M8SK72_9BACT1.650e-2940.00HNH endonuclease n=1 Tax=Acidobacteria bacterium A... [more]
UPI00131E5CA18.080e-2839.64HNH endonuclease n=1 Tax=Granulicella sp. S156 Tax... [more]
A0A7S4FBB3_CHRCT1.730e-2734.05Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
UPI001EF5F0AD1.730e-2737.89HNH endonuclease n=1 Tax=Occallatibacter savannae ... [more]
A0A239JR82_9BACT1.830e-2740.12HNH endonuclease n=1 Tax=Granulicella rosea TaxID=... [more]
E8X0I7_GRATM2.860e-2736.78HNH endonuclease n=2 Tax=Granulicella TaxID=940557... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002711HNH endonucleasePFAMPF01844HNHcoord: 227..262
e-value: 2.5E-6
score: 27.6
NoneNo IPR availablePANTHERPTHR45766:SF5DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3coord: 101..280
NoneNo IPR availablePANTHERPTHR45766FAMILY NOT NAMEDcoord: 101..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1573contigH-paniculata_contig1573:15559..20573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1573.3326.1mRNA_H-paniculata_contig1573.3326.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1573 15174..20649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1573.3326.1 ID=prot_H-paniculata_contig1573.3326.1|Name=mRNA_H-paniculata_contig1573.3326.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=321bp
MRAFVEPYIFISISRWIHLYTPPCGSSNSVTSRVTCSLARDSKCLGLDSV
KCNVSDIREQLKRRGYTPTGVRTKAGVLGELIGLVRAEGFAPPHSVEGNL
RQRRNQHAGFVDRTTMETGPRGFPLCRFCQQETPSKMRTFCSNGCVHEHK
IRSQGSYVRKCLSTRDGGQCAECGADAGGLYKRARQAWISEKLPLLRTSA
VVQAVAGTPFEGMVPRAGSNARPTSGEFWHADHIVPVVLGGGQCGLNNFR
TLCVPCHKASTKRLARERALSRRREAQGGSDRGGSNDCGHRGTKQKTVRV
ARSIHTLSSSCVDNGDRDGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002711HNH