prot_H-paniculata_contig15719.3319.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15719.3319.1
Unique Nameprot_H-paniculata_contig15719.3319.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length64
Homology
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BLAST of mRNA_H-paniculata_contig15719.3319.1 vs. uniprot
Match: D7G2B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B7_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 2.060e-6
Identity = 24/64 (37.50%), Postives = 42/64 (65.62%), Query Frame = 0 
Query:    1 MYKEDPDVVCAQLLQFSTKGNSGLCGIYMELGQEYLIDLVRDENDDLRAVGLCGAFRSWSEVTA 64
            +YK +  V     ++ +T  ++  CG+Y+++G EYL+DL R + + LR+VG CGA +SW+ + A
Sbjct:   41 LYKTEAGVDYPVEIEVTTSASAAHCGVYLQVGGEYLLDLYRYKGE-LRSVGACGATQSWTTLPA 103
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BLAST of mRNA_H-paniculata_contig15719.3319.1 vs. uniprot
Match: A0A6H5JAS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS0_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 2.620e-6
Identity = 24/64 (37.50%), Postives = 42/64 (65.62%), Query Frame = 0 
Query:    1 MYKEDPDVVCAQLLQFSTKGNSGLCGIYMELGQEYLIDLVRDENDDLRAVGLCGAFRSWSEVTA 64
            +YK +  V     ++ +T  ++  CG+Y+++G EYL+DL R + + LR+VG CGA +SW+ + A
Sbjct:   53 LYKTEVGVDYPVEIEVTTSASAADCGVYLQVGGEYLLDLYRYKGE-LRSVGACGATQSWTTLPA 115
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15719.3319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2B7_ECTSI2.060e-637.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAS0_9PHAE2.620e-637.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 1..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15719contigH-paniculata_contig15719:3049..3240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15719.3319.1mRNA_H-paniculata_contig15719.3319.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15719 3019..3240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15719.3319.1 ID=prot_H-paniculata_contig15719.3319.1|Name=mRNA_H-paniculata_contig15719.3319.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bp
MYKEDPDVVCAQLLQFSTKGNSGLCGIYMELGQEYLIDLVRDENDDLRAV
GLCGAFRSWSEVTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008993TIMP-like_OB-fold