prot_H-paniculata_contig15658.3283.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15658.3283.1
Unique Nameprot_H-paniculata_contig15658.3283.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length183
Homology
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BLAST of mRNA_H-paniculata_contig15658.3283.1 vs. uniprot
Match: D8LGU0_ECTSI (Polyribonucleotide nucleotidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGU0_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 4.500e-85
Identity = 147/183 (80.33%), Postives = 159/183 (86.89%), Query Frame = 0 
Query:    1 NVQITLKKLFNRRMRKLVKARGVRCDGRRTDEARGLLTVRPITIETSLLPRTHGSCLFTRGDTQAIATVTLGGSASSQKLDGITGTTLKNFYLQYTFPPSCVGEVGRSGGPPGRREIGHGTLAEKALSYTLPDERDFPYSVRVESLITESCGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG 183
            +V+  LKKL+++R+R +VK  G RCDGRRTDE      VRPI+IET LLPRTHGSCLFTRGDTQAIATVTLGGS SSQK DGITG  LK+FYLQYTFPPSCVGE GR GGP GRRE+GHG LAEKALSYT+P   DFPY+VRVESLITESCGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG
Sbjct:  319 DVETALKKLYSKRLRTIVKETGRRCDGRRTDE------VRPISIETGLLPRTHGSCLFTRGDTQAIATVTLGGSGSSQKTDGITGMILKHFYLQYTFPPSCVGETGRIGGP-GRREVGHGALAEKALSYTVPPVNDFPYTVRVESLITESCGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG 494
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BLAST of mRNA_H-paniculata_contig15658.3283.1 vs. uniprot
Match: A0A835ZC49_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC49_9STRA)

HSP 1 Score: 234 bits (596), Expect = 1.060e-69
Identity = 125/183 (68.31%), Postives = 148/183 (80.87%), Query Frame = 0 
Query:    1 NVQITLKKLFNRRMRKLVKARGVRCDGRRTDEARGLLTVRPITIETSLLPRTHGSCLFTRGDTQAIATVTLGGSASSQKLDGITGTTLKNFYLQYTFPPSCVGEVGRSGGPPGRREIGHGTLAEKALSYTLPDERDFPYSVRVESLITESCGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG 183
            +V + LKKL+  R+RK+V   G R DGRR +E      VRPI+IETS+L RTHGS LFTRG+TQA+ATVTLGGS+ +QK +GI G+  K FYLQYTFPPSCVGEVGR G P GRRE+GHG LAE+AL+  +PD+  FPYS+RVESLITESCGSSSMASVCGG +A+MDAG+PV  PIAGVAMG
Sbjct:  245 DVCVALKKLWASRLRKMVHEGGRRSDGRRPNE------VRPISIETSVLARTHGSALFTRGETQALATVTLGGSSMAQKTEGIDGSQSKRFYLQYTFPPSCVGEVGRVGAP-GRREVGHGNLAERALAPVIPDDESFPYSIRVESLITESCGSSSMASVCGGCMALMDAGVPVKRPIAGVAMG 420
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BLAST of mRNA_H-paniculata_contig15658.3283.1 vs. uniprot
Match: A0A6U0G2M6_9STRA (Polynucleotide phosphorylase 1 (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0G2M6_9STRA)

HSP 1 Score: 220 bits (560), Expect = 8.770e-66
Identity = 120/182 (65.93%), Postives = 135/182 (74.18%), Query Frame = 0 
Query:    2 VQITLKKLFNRRMRKLVKARGVRCDGRRTDEARGLLTVRPITIETSLLPRTHGSCLFTRGDTQAIATVTLGGSASSQKLDGITGTTLKNFYLQYTFPPSCVGEVGRSGGPPGRREIGHGTLAEKALSYTLPDERDFPYSVRVESLITESCGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG 183
            ++   K L  RRM ++ K  G RCDGR  DE      VR I IE  +LPR HGS LFTRG+TQAIAT TLG S   QK+D ITG   K FYLQYTFPPSCVGE GR G P GRRE+GHG LAE+AL  TLP E +FPYS+RVESLITES GSSSMASVCGGSLA+MDAG+PV  P+AG+AMG
Sbjct:  232 IKAAYKDLLCRRMFEMAKTTGKRCDGRSLDE------VRRIDIEAGILPRVHGSALFTRGETQAIATSTLGDSGMKQKIDKITGMEAKRFYLQYTFPPSCVGETGRVGAP-GRREVGHGNLAERALIPTLPSEEEFPYSIRVESLITESHGSSSMASVCGGSLALMDAGVPVKKPVAGIAMG 406
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BLAST of mRNA_H-paniculata_contig15658.3283.1 vs. uniprot
Match: A0A7R9VVZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVZ1_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.790e-65
Identity = 113/183 (61.75%), Postives = 135/183 (73.77%), Query Frame = 0 
Query:    1 NVQITLKKLFNRRMRKLVKARGVRCDGRRTDEARGLLTVRPITIETSLLPRTHGSCLFTRGDTQAIATVTLGGSASSQKLDGITGTTLKNFYLQYTFPPSCVGEVGRSGGPPGRREIGHGTLAEKALSYTLPDERDFPYSVRVESLITESCGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG 183
            +++   K L  RRM  L K+  VRCDGR  D+      VRPI+ E  +LPRTHGS LFTRG+TQ++AT TLG +   QK+D I+G   K FYLQYTFPPSCVGE GR G P GRREIGHG LAE+AL + LP E  FPY++RVESLITES GS SMASVCGG LA+MDAG+P+  P+AG+AMG
Sbjct:   25 HIKGAFKDLLRRRMYALGKSSSVRCDGRDLDQ------VRPISAEAGVLPRTHGSALFTRGETQSLATATLGDAGMRQKIDKISGLDSKRFYLQYTFPPSCVGETGRVGAP-GRREIGHGNLAERALVHALPSEESFPYTIRVESLITESHGSPSMASVCGGCLALMDAGVPIERPVAGIAMG 200
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BLAST of mRNA_H-paniculata_contig15658.3283.1 vs. uniprot
Match: A0A7R9ZU64_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZU64_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.790e-64
Identity = 118/183 (64.48%), Postives = 138/183 (75.41%), Query Frame = 0 
Query:    1 NVQITLKKLFNRRMRKLVKARGVRCDGRRTDEARGLLTVRPITIETSLLPRTHGSCLFTRGDTQAIATVTLGGSASSQKLDGITGTTLKNFYLQYTFPPSCVGEVGRSGGPPGRREIGHGTLAEKALSYTLPDERDFPYSVRVESLITESCGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG 183
            +++   K L  RRM +  K  G RCDGR  DE      +R +T+ET  LP+THGS LFTRG+TQAIAT TLG S   QK+D I GT  K FYLQYTFPPSCVGE GR+G P GRREIGHG LAE+AL  TLP E DFPYS+RVESLITES GSSSMASVCGG LA+MD+G+P+ +P+AG+AMG
Sbjct:  383 DIKSAFKDLLCRRMYERAKTTGKRCDGRELDE------IRHLTMETGFLPKTHGSALFTRGETQAIATTTLGDSGMRQKIDKIDGTEEKRFYLQYTFPPSCVGETGRTGAP-GRREIGHGNLAERALVPTLPSEEDFPYSIRVESLITESHGSSSMASVCGGCLALMDSGVPIKNPVAGIAMG 558
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BLAST of mRNA_H-paniculata_contig15658.3283.1 vs. uniprot
Match: A0A7S2A620_TRICV (Polynucleotide phosphorylase 1 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A620_TRICV)

HSP 1 Score: 218 bits (554), Expect = 5.740e-64
Identity = 120/177 (67.80%), Postives = 132/177 (74.58%), Query Frame = 0 
Query:    7 KKLFNRRMRKLVKARGVRCDGRRTDEARGLLTVRPITIETSLLPRTHGSCLFTRGDTQAIATVTLGGSASSQKLDGITGTTLKNFYLQYTFPPSCVGEVGRSGGPPGRREIGHGTLAEKALSYTLPDERDFPYSVRVESLITESCGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG 183
            K L  RRM  L K  G+RCDGRRTDE      +R I  E  +LPRTHGS LFTRGDTQAIAT TLG S   QK+D I G   K FYLQYTFPPSCVGE GR G P GRREIGHG LAE+AL   LP E DFPY++RVESLITES GSSSMASVCGG LA+MDAG+P+  P+AG+AMG
Sbjct:  340 KDLLCRRMFVLAKESGLRCDGRRTDE------IRIIESEAGILPRTHGSALFTRGDTQAIATATLGDSGMRQKIDRIDGQDSKRFYLQYTFPPSCVGETGRVGAP-GRREIGHGNLAERALVPALPSEDDFPYTIRVESLITESHGSSSMASVCGGCLALMDAGVPIKRPVAGIAMG 509
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BLAST of mRNA_H-paniculata_contig15658.3283.1 vs. uniprot
Match: A0A1E7FE01_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE01_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.370e-63
Identity = 116/183 (63.39%), Postives = 137/183 (74.86%), Query Frame = 0 
Query:    1 NVQITLKKLFNRRMRKLVKARGVRCDGRRTDEARGLLTVRPITIETSLLPRTHGSCLFTRGDTQAIATVTLGGSASSQKLDGITGTTLKNFYLQYTFPPSCVGEVGRSGGPPGRREIGHGTLAEKALSYTLPDERDFPYSVRVESLITESCGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG 183
            ++   LK L  RRM    K  G RCDGR   E      +R +T+E   LPRTHGS LFTRG+TQ +AT TLGGS   QK+D ITGT +K FYLQYTFPPSCVGE GR+G P GRRE+GHG LAE+AL  TLP E +FPY++RVE+L+TES GSSSMASVCGG LA+MDAGIP+ SP+AG+AMG
Sbjct:  363 DISSALKDLLCRRMFIRAKETGKRCDGRELTE------IRQLTMEAGFLPRTHGSALFTRGETQVVATSTLGGSGMRQKIDTITGTNVKRFYLQYTFPPSCVGETGRTGAP-GRREVGHGNLAERALIPTLPTEEEFPYTIRVEALVTESHGSSSMASVCGGCLALMDAGIPIKSPVAGIAMG 538
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BLAST of mRNA_H-paniculata_contig15658.3283.1 vs. uniprot
Match: A0A7S3VD11_9STRA (Polyribonucleotide nucleotidyltransferase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VD11_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.760e-62
Identity = 115/177 (64.97%), Postives = 137/177 (77.40%), Query Frame = 0 
Query:    7 KKLFNRRMRKLVKARGVRCDGRRTDEARGLLTVRPITIETSLLPRTHGSCLFTRGDTQAIATVTLGGSASSQKLDGITGTTLKNFYLQYTFPPSCVGEVGRSGGPPGRREIGHGTLAEKALSYTLPDERDFPYSVRVESLITESCGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG 183
            K L +++M +  K  G+RCDGR+ DE      VR I I T++LP+ HGS LFTRG+TQAIAT TLG S   QK+D + G   K FYLQYTFPPSCVGE GR G  PGRRE+GHG LAE+ALS TLP E +FPY++RVESLITES GSSSMASVCGGSLA+MDAG+PV +P+AG+AMG
Sbjct:  489 KSLLSKKMYQKAKNTGIRCDGRKLDE------VRAIDIATTMLPKVHGSALFTRGETQAIATATLGDSGMKQKIDTVDGLNNKRFYLQYTFPPSCVGETGRVG-MPGRREVGHGNLAERALSATLPSEDEFPYTIRVESLITESNGSSSMASVCGGSLALMDAGVPVKAPVAGIAMG 658
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BLAST of mRNA_H-paniculata_contig15658.3283.1 vs. uniprot
Match: PNP_CHLPN (Polyribonucleotide nucleotidyltransferase n=7 Tax=Chlamydia TaxID=810 RepID=PNP_CHLPN)

HSP 1 Score: 213 bits (543), Expect = 2.580e-62
Identity = 116/183 (63.39%), Postives = 136/183 (74.32%), Query Frame = 0 
Query:    1 NVQITLKKLFNRRMRKLVKARGVRCDGRRTDEARGLLTVRPITIETSLLPRTHGSCLFTRGDTQAIATVTLGGSASSQKLDGITGTTLKNFYLQYTFPPSCVGEVGRSGGPPGRREIGHGTLAEKALSYTLPDERDFPYSVRVESLITESCGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG 183
            N++   K L +  MR L++ R +R DGR       L TVRPITIETS LPRTHGSCLFTRG+TQ +A  TLG  A +Q+ + + G  L  FYLQY FPP  VGEVGR G P GRREIGHG LAEKALS+ LPD   FPY++R+ES ITES GSSSMASVCGG LA+MDAG+P+SSPIAG+AMG
Sbjct:  292 NIKAACKTLKSDTMRALIRDREIRADGR------SLTTVRPITIETSYLPRTHGSCLFTRGETQTLAVCTLGSEAMAQRYEDLNGEGLSKFYLQYFFPPFSVGEVGRIGSP-GRREIGHGKLAEKALSHALPDSATFPYTIRIESNITESNGSSSMASVCGGCLALMDAGVPISSPIAGIAMG 467
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BLAST of mRNA_H-paniculata_contig15658.3283.1 vs. uniprot
Match: A0A448ZGY4_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGY4_9STRA)

HSP 1 Score: 214 bits (545), Expect = 8.540e-62
Identity = 114/183 (62.30%), Postives = 138/183 (75.41%), Query Frame = 0 
Query:    1 NVQITLKKLFNRRMRKLVKARGVRCDGRRTDEARGLLTVRPITIETSLLPRTHGSCLFTRGDTQAIATVTLGGSASSQKLDGITGTTLKNFYLQYTFPPSCVGEVGRSGGPPGRREIGHGTLAEKALSYTLPDERDFPYSVRVESLITESCGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG 183
            +++   K L  RRM    +  G RCDGR  DE      +R +T+ET  LP+THGS LFTRG+TQAIAT TLG S   QK+D I GT  K FYLQY+FPPSCVGE GR+G P GRREIGHG LAE+AL+ TLP E +FPY++RVESLITES GSSSMASVCGG LA+MD+G+P+ +P+AG+AMG
Sbjct:  367 DIKSAFKDLLCRRMFVRAQETGQRCDGRALDE------IRHLTMETGFLPKTHGSALFTRGETQAIATTTLGDSGMRQKIDKIDGTEEKRFYLQYSFPPSCVGETGRTGAP-GRREIGHGNLAERALAPTLPSEEEFPYTIRVESLITESHGSSSMASVCGGCLALMDSGVPIKNPVAGIAMG 542
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15658.3283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGU0_ECTSI4.500e-8580.33Polyribonucleotide nucleotidyltransferase n=2 Tax=... [more]
A0A835ZC49_9STRA1.060e-6968.31Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A6U0G2M6_9STRA8.770e-6665.93Polynucleotide phosphorylase 1 (Fragment) n=1 Tax=... [more]
A0A7R9VVZ1_9STRA2.790e-6561.75Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7R9ZU64_9STRA2.790e-6464.48Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A7S2A620_TRICV5.740e-6467.80Polynucleotide phosphorylase 1 (Fragment) n=1 Tax=... [more]
A0A1E7FE01_9STRA1.370e-6363.39Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A7S3VD11_9STRA1.760e-6264.97Polyribonucleotide nucleotidyltransferase n=2 Tax=... [more]
PNP_CHLPN2.580e-6263.39Polyribonucleotide nucleotidyltransferase n=7 Tax=... [more]
A0A448ZGY4_9STRA8.540e-6262.30Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 1..183
e-value: 2.1E-62
score: 212.8
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 39..172
e-value: 2.0E-21
score: 76.9
IPR012162Polyribonucleotide nucleotidyltransferasePANTHERPTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEcoord: 5..183
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 7..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15658contigH-paniculata_contig15658:173..4950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15658.3283.1mRNA_H-paniculata_contig15658.3283.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15658 173..4950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15658.3283.1 ID=prot_H-paniculata_contig15658.3283.1|Name=mRNA_H-paniculata_contig15658.3283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=183bp
NVQITLKKLFNRRMRKLVKARGVRCDGRRTDEARGLLTVRPITIETSLLP
RTHGSCLFTRGDTQAIATVTLGGSASSQKLDGITGTTLKNFYLQYTFPPS
CVGEVGRSGGPPGRREIGHGTLAEKALSYTLPDERDFPYSVRVESLITES
CGSSSMASVCGGSLAMMDAGIPVSSPIAGVAMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR012162PNPase
IPR020568Ribosomal_S5_D2-typ_fold