prot_H-paniculata_contig1557.3248.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1557.3248.1 vs. uniprot
Match: A0A438BZM1_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BZM1_VITVI) HSP 1 Score: 85.5 bits (210), Expect = 9.000e-17 Identity = 53/129 (41.09%), Postives = 74/129 (57.36%), Query Frame = 0
Query: 7 NGVWEKIARPKDMFVVGTEILYERKVSKNGKVEEYKRRLVAQDFRQIEGVHCTEKYSPTPATASIRTLLATAAAKDGELPHFDAEQAFLKADI---VYIEIPERFQ--HFLGAVGKLNKAICELVQAGR 130
N VW + RPKD+ V+GT+ +++ K+ +NG + K RLVAQ F+QIEG+ E ++P SIR LLA A +L D + AFL + VY+E P+ FQ + V KL KA+ L QA R
Sbjct: 477 NDVWFLVPRPKDVNVIGTKWIFKNKMDENGVIVRNKARLVAQGFKQIEGIDFDETFAPVARLESIRILLAVACVWKFKLFQMDVKSAFLNGILNEEVYVEQPKGFQDPRYPNHVYKLRKALYGLKQAPR 605
BLAST of mRNA_H-paniculata_contig1557.3248.1 vs. uniprot
Match: A0A438BYD0_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BYD0_VITVI) HSP 1 Score: 85.5 bits (210), Expect = 9.130e-17 Identity = 53/129 (41.09%), Postives = 74/129 (57.36%), Query Frame = 0
Query: 7 NGVWEKIARPKDMFVVGTEILYERKVSKNGKVEEYKRRLVAQDFRQIEGVHCTEKYSPTPATASIRTLLATAAAKDGELPHFDAEQAFLKADI---VYIEIPERFQ--HFLGAVGKLNKAICELVQAGR 130
N VW + RPKD+ V+GT+ +++ K+ +NG + K RLVAQ F+QIEG+ E ++P SIR LLA A +L D + AFL + VY+E P+ FQ + V KL KA+ L QA R
Sbjct: 1018 NDVWFLVPRPKDVNVIGTKWIFKNKMDENGVIVRNKARLVAQGFKQIEGIDFDETFAPVARLESIRILLAVACVWKFKLFQMDVKSAFLNGILNEEVYVEQPKGFQDPRYPNHVYKLRKALYGLKQAPR 1146
BLAST of mRNA_H-paniculata_contig1557.3248.1 vs. uniprot
Match: A0A438CA12_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 (Fragment) n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CA12_VITVI) HSP 1 Score: 84.3 bits (207), Expect = 2.030e-16 Identity = 52/129 (40.31%), Postives = 74/129 (57.36%), Query Frame = 0
Query: 7 NGVWEKIARPKDMFVVGTEILYERKVSKNGKVEEYKRRLVAQDFRQIEGVHCTEKYSPTPATASIRTLLATAAAKDGELPHFDAEQAFLKADI---VYIEIPERFQ--HFLGAVGKLNKAICELVQAGR 130
N VW + RPKD+ V+GT+ +++ K+ +NG + K RLVAQ F+QIEG+ E ++P SIR LLA A +L D + AFL + VY+E P+ FQ + V +L KA+ L QA R
Sbjct: 120 NDVWFLVPRPKDVNVIGTKWIFKNKMDENGVIVRNKARLVAQGFKQIEGIDFDETFAPVARLESIRILLAVACVWKFKLFQMDVKSAFLNGILNEEVYVEQPKGFQDPRYPNHVYRLRKALYGLKQAPR 248
BLAST of mRNA_H-paniculata_contig1557.3248.1 vs. uniprot
Match: A0A438C6V0_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 (Fragment) n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438C6V0_VITVI) HSP 1 Score: 84.3 bits (207), Expect = 2.200e-16 Identity = 52/129 (40.31%), Postives = 74/129 (57.36%), Query Frame = 0
Query: 7 NGVWEKIARPKDMFVVGTEILYERKVSKNGKVEEYKRRLVAQDFRQIEGVHCTEKYSPTPATASIRTLLATAAAKDGELPHFDAEQAFLKADI---VYIEIPERFQ--HFLGAVGKLNKAICELVQAGR 130
N VW + RPKD+ V+GT+ +++ K+ +NG + K RLVAQ F+QIEG+ E ++P SIR LLA A +L D + AFL + VY+E P+ FQ + V +L KA+ L QA R
Sbjct: 49 NDVWFLVPRPKDVNVIGTKWIFKNKMDENGVIVRNKARLVAQGFKQIEGIDFDETFAPVARLESIRILLAVACVWKFKLFQMDVKSAFLNGILNEEVYVEQPKGFQDPRYPNHVYRLRKALYGLKQAPR 177
BLAST of mRNA_H-paniculata_contig1557.3248.1 vs. uniprot
Match: A0A438EPS3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EPS3_VITVI) HSP 1 Score: 84.3 bits (207), Expect = 2.230e-16 Identity = 52/129 (40.31%), Postives = 74/129 (57.36%), Query Frame = 0
Query: 7 NGVWEKIARPKDMFVVGTEILYERKVSKNGKVEEYKRRLVAQDFRQIEGVHCTEKYSPTPATASIRTLLATAAAKDGELPHFDAEQAFLKADI---VYIEIPERFQ--HFLGAVGKLNKAICELVQAGR 130
N VW + RPKD+ V+GT+ +++ K+ +NG + K RLVAQ F+QIEG+ E ++P SIR LLA A +L D + AFL + VY+E P+ FQ + V +L KA+ L QA R
Sbjct: 820 NDVWFLVPRPKDVNVIGTKWIFKNKMDENGVIVRNKARLVAQGFKQIEGIDFDETFAPVARLESIRILLAVACVWKFKLFQMDVKSAFLNGILNEEVYVEQPKGFQDPRYPNHVYRLRKALYGLKQAPR 948
BLAST of mRNA_H-paniculata_contig1557.3248.1 vs. uniprot
Match: A0A438D6X5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438D6X5_VITVI) HSP 1 Score: 84.3 bits (207), Expect = 2.290e-16 Identity = 52/129 (40.31%), Postives = 74/129 (57.36%), Query Frame = 0
Query: 7 NGVWEKIARPKDMFVVGTEILYERKVSKNGKVEEYKRRLVAQDFRQIEGVHCTEKYSPTPATASIRTLLATAAAKDGELPHFDAEQAFLKADI---VYIEIPERFQ--HFLGAVGKLNKAICELVQAGR 130
N VW + RPKD+ V+GT+ +++ K+ +NG + K RLVAQ F+QIEG+ E ++P SIR LLA A +L D + AFL + VY+E P+ FQ + V +L KA+ L QA R
Sbjct: 1037 NDVWFLVPRPKDVNVIGTKWIFKNKMDENGVIVRNKARLVAQGFKQIEGIDFDETFAPVARLESIRILLAVACVWKFKLFQMDVKSAFLNGVLNEEVYVEQPKGFQDPRYPNHVYRLRKALYGLKQAPR 1165
BLAST of mRNA_H-paniculata_contig1557.3248.1 vs. uniprot
Match: A0A438IZQ0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IZQ0_VITVI) HSP 1 Score: 80.1 bits (196), Expect = 6.720e-15 Identity = 50/129 (38.76%), Postives = 73/129 (56.59%), Query Frame = 0
Query: 7 NGVWEKIARPKDMFVVGTEILYERKVSKNGKVEEYKRRLVAQDFRQIEGVHCTEKYSPTPATASIRTLLATAAAKDGELPHFDAEQAFLKADI---VYIEIPERFQ--HFLGAVGKLNKAICELVQAGR 130
N VW + RPKD+ V+GT+ +++ K+ +NG + K RLVAQ F+QIEG+ + ++P SIR LL A +L D + AFL + VY+E P+ FQ + V +L KA+ L QA R
Sbjct: 636 NDVWFLVPRPKDVNVIGTKWIFKNKMDENGAIVRNKARLVAQGFKQIEGIDFDKTFAPFARFESIRILLVVACIWKFKLFQMDVKSAFLNGILNEEVYVEQPKGFQDPRYPNHVYRLRKALYGLKQAPR 764
BLAST of mRNA_H-paniculata_contig1557.3248.1 vs. uniprot
Match: A5BXT6_VITVI (CCHC-type domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5BXT6_VITVI) HSP 1 Score: 80.1 bits (196), Expect = 6.890e-15 Identity = 50/129 (38.76%), Postives = 73/129 (56.59%), Query Frame = 0
Query: 7 NGVWEKIARPKDMFVVGTEILYERKVSKNGKVEEYKRRLVAQDFRQIEGVHCTEKYSPTPATASIRTLLATAAAKDGELPHFDAEQAFLKADI---VYIEIPERFQ--HFLGAVGKLNKAICELVQAGR 130
N VW + RPKD+ V+GT+ +++ K+ +NG + K RLVAQ F+QIEG+ + ++P SIR LL A +L D + AFL + VY+E P+ FQ + V +L KA+ L QA R
Sbjct: 1022 NDVWFLVPRPKDVNVIGTKWIFKNKMDENGAIVRNKARLVAQGFKQIEGIDFDKTFAPFARFESIRILLVVACIWKFKLFQMDVKSAFLNGILNEEVYVEQPKGFQDPRYPNHVYRLRKALYGLKQAPR 1150
BLAST of mRNA_H-paniculata_contig1557.3248.1 vs. uniprot
Match: A0A438JGI6_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JGI6_VITVI) HSP 1 Score: 79.0 bits (193), Expect = 1.530e-14 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 0
Query: 7 NGVWEKIARPKDMFVVGTEILYERKVSKNGKVEEYKRRLVAQDFRQIEGVHCTEKYSPTPATASIRTLLATAAAKDGELPHFDAEQAFLKADI---VYIEIPERFQ 109
N VW + RPKD+ V+GT+ +++ K+ +NG + K RLVAQ F+QIEG+ E ++P SIR LLA A +L D + AFL + VY+E P+ FQ
Sbjct: 186 NDVWFLVPRPKDVNVIGTKWIFKNKMDENGVIVRNKARLVAQGFKQIEGIDFDETFAPVARLESIRILLAVACVWKFKLFQMDVKSAFLNGILNEEVYVEQPKGFQ 291
BLAST of mRNA_H-paniculata_contig1557.3248.1 vs. uniprot
Match: A0A438BVI5_VITVI (Copia protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BVI5_VITVI) HSP 1 Score: 79.0 bits (193), Expect = 1.770e-14 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 0
Query: 7 NGVWEKIARPKDMFVVGTEILYERKVSKNGKVEEYKRRLVAQDFRQIEGVHCTEKYSPTPATASIRTLLATAAAKDGELPHFDAEQAFLKADI---VYIEIPERFQ 109
N VW + RPKD+ V+GT+ +++ K+ +NG + K RLVAQ F+QIEG+ E ++P SIR LLA A +L D + AFL + VY+E P+ FQ
Sbjct: 708 NDVWFLVPRPKDVNVIGTKWIFKNKMDENGVIVRNKARLVAQGFKQIEGIDFDETFAPVARLESIRILLAVACVWKFKLFQMDVKSAFLNGILNEEVYVEQPKGFQ 813 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1557.3248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig1557.3248.1 ID=prot_H-paniculata_contig1557.3248.1|Name=mRNA_H-paniculata_contig1557.3248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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