prot_H-paniculata_contig1554.3235.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1554.3235.1
Unique Nameprot_H-paniculata_contig1554.3235.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length124
Homology
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BLAST of mRNA_H-paniculata_contig1554.3235.1 vs. uniprot
Match: A0A6H5KGY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY8_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 2.780e-8
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 0 
Query:   82 VDVEENVYGDGFGWGFLTDATLTATRIRG 110
            VDV+EN YGDGFGW FL DATLTATRIRG
Sbjct:    7 VDVQENGYGDGFGWKFLIDATLTATRIRG 35
[Close]
BLAST of mRNA_H-paniculata_contig1554.3235.1 vs. uniprot
Match: A0A6H5JUM8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM8_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 1.470e-6
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 0 
Query:   82 VDVEENVYGDGFGWGFLTDATLTATRIRG 110
            VDV+EN YGDGFGW FL DATLTATRIRG
Sbjct:    7 VDVQENGYGDGFGWKFLIDATLTATRIRG 35
[Close]
BLAST of mRNA_H-paniculata_contig1554.3235.1 vs. uniprot
Match: D7G0P0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P0_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 5.250e-6
Identity = 24/29 (82.76%), Postives = 25/29 (86.21%), Query Frame = 0 
Query:   81 LVDVEENVYGDGFGWGFLTDATLTATRIR 109
            +VDV EN YGDGFGW FL DATLTATRIR
Sbjct:    1 MVDVPENGYGDGFGWKFLIDATLTATRIR 29
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1554.3235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KGY8_9PHAE2.780e-886.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUM8_9PHAE1.470e-686.21Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G0P0_ECTSI5.250e-682.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1554contigH-paniculata_contig1554:11698..13470 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1554.3235.1mRNA_H-paniculata_contig1554.3235.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1554 11687..13470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1554.3235.1 ID=prot_H-paniculata_contig1554.3235.1|Name=mRNA_H-paniculata_contig1554.3235.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MIVVVDIRRPAGLGVDATLQLEAFLEHAQTLVSHCGALGRAGAVETPFGL
IVPASSIHGKVVQVVCKGRPVCSADLSSMRLVDVEENVYGDGFGWGFLTD
ATLTATRIRGLSKKVNDARNTTG*
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