prot_H-paniculata_contig1547.3200.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1547.3200.1
Unique Nameprot_H-paniculata_contig1547.3200.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length291
Homology
BLAST of mRNA_H-paniculata_contig1547.3200.1 vs. uniprot
Match: D8LBD7_ECTSI (GrpE protein homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD7_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 4.550e-99
Identity = 172/290 (59.31%), Postives = 205/290 (70.69%), Query Frame = 0
Query:    1 MTCTIRSLVTVASILVANGVCAFVNVNGITSSVVSNGRHLCVPAKSTAPVSHRSSRRWGKSEKEMMKDGSRGVGGVDKKHREGPFSSLRESFKKVVRKSPFSTSRMAKDTVDDVLNSEAFLNKKVEMLKKQIAATQKNTEEVEAEGAKNWEEWGPQVERLQKEFTLIKNRGGEEAIRGRNKGKAEAINDILGVADNFERAAAAIAPETDGERAVVEYYKGVYDTMMGCLESLGLEEVENIGAPFDYNMHNAIMREPSTEFGEDVVCKVFQKGYRVGDTLVRPAMVAVASP 290
            M+C +RSL  VA++L AN  CAFV+  G+TS     GR +  PA ++     RSSRRW K++     D   G GG   +   GPFSS  +       + PFS +   KD VDD+LNS+AFLNKKVEML+KQI ATQ +    +A+  + W EWGPQV+RL+KEF+ +K RGGE   +  NKGKAEAIN+ILGVADNFERAA AI+ ETDGERAVV YYK  YD MM CLE L L EV+ IGAPFDYN+HNAIMRE + EF EDVVCKVFQKGY+VGDTLVRPAMVAVA P
Sbjct:    1 MSCAMRSLFAVAAMLAANEACAFVHPAGLTSLA---GRSVAAPACTSV---ERSSRRWDKAQ---QLDAGNGDGGSSGEQPAGPFSSWVKKTAGRFGRGPFSRAAK-KDEVDDLLNSDAFLNKKVEMLQKQINATQADIVTAQAQADEQWAEWGPQVQRLEKEFSALKGRGGEARTQAYNKGKAEAINNILGVADNFERAAGAISAETDGERAVVAYYKDTYDNMMKCLEGLDLVEVDTIGAPFDYNIHNAIMRENTDEFPEDVVCKVFQKGYQVGDTLVRPAMVAVAVP 280          
BLAST of mRNA_H-paniculata_contig1547.3200.1 vs. uniprot
Match: A0A835ZCF7_9STRA (GrpE protein homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCF7_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.730e-58
Identity = 98/179 (54.75%), Postives = 127/179 (70.95%), Query Frame = 0
Query:  111 VDDVLNSEAFLNKKVEMLKKQIAATQKNTEEVEAEGAKNWEEWGPQVERLQKEFTLIKNRGGEEAIRGRNKGKAEAINDILGVADNFERAAAAIAPETDGERAVVEYYKGVYDTMMGCLESLGLEEVENIGAPFDYNMHNAIMREPSTEFGEDVVCKVFQKGYRVGDTLVRPAMVAVAS 289
            VDD+L S AFL KKVE+LKKQ+A T++      AE  K WEEWGPQ++RL+ EFT +K R   + +   N+ K +A+  IL V DNFERA+ AI  +TDGE+AVV YYKGVY+ M    + LG+E V  +G PFDYN+H A+MR+PS E  ED+V + F KG+ VG TL+RPAMVAV+S
Sbjct:   63 VDDLLESPAFLTKKVEVLKKQLAKTEEEIAAANAEADKEWEEWGPQIQRLETEFTFLKQRMLNDTMEAGNEAKVKALKAILTVNDNFERASQAIKAQTDGEKAVVAYYKGVYNAMHTVFKELGMEPVPTVGHPFDYNLHEAVMRQPSAEHEEDLVSQEFTKGFTVGGTLIRPAMVAVSS 241          
BLAST of mRNA_H-paniculata_contig1547.3200.1 vs. uniprot
Match: H6WB81_VAULI (GrpE protein homolog n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB81_VAULI)

HSP 1 Score: 171 bits (434), Expect = 7.710e-49
Identity = 82/178 (46.07%), Postives = 119/178 (66.85%), Query Frame = 0
Query:  112 DDVLNSEAFLNKKVEMLKKQIAATQKNTEEVEAEGAKNWEEWGPQVERLQKEFTLIKNRGGEEAIRGRNKGKAEAINDILGVADNFERAAAAIAPETDGERAVVEYYKGVYDTMMGCLESLGLEEVENIGAPFDYNMHNAIMREPSTEFGEDVVCKVFQKGYRVGDTLVRPAMVAVAS 289
            DD+L +  FL KK+E+L KQIA  ++       E  K WEEWGPQ+ERL++EF  ++ R   + +      K + + +IL V+DNF RA+ AI+P T+GE AVV+YYK +Y+ M     +LG++ +  +G PFDYN+H A+MR+ S+EF ED+VC    KG+ VG  L+RPAMVAV++
Sbjct:   68 DDLLQTPQFLTKKIEVLNKQIAKKEEEISAANLEADKEWEEWGPQIERLEREFENVRARMLNDTMEASTSAKVKVLKEILAVSDNFMRASQAISPSTEGEIAVVDYYKSIYEEMQAVFVALGMKPIATVGEPFDYNLHEAVMRQ-SSEFDEDIVCLELTKGFMVGKELIRPAMVAVST 244          
BLAST of mRNA_H-paniculata_contig1547.3200.1 vs. uniprot
Match: A0A7S2V1T8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1T8_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.910e-43
Identity = 70/180 (38.89%), Postives = 116/180 (64.44%), Query Frame = 0
Query:  110 TVDDVLNSEAFLNKKVEMLKKQIAATQKNTEEVEAEGAKNWEEWGPQVERLQKEFTLIKNRGGEEAIRGRNKGKAEAINDILGVADNFERAAAAIAPETDGERAVVEYYKGVYDTMMGCLESLGLEEVENIGAPFDYNMHNAIMREPSTEFGEDVVCKVFQKGYRVGDTLVRPAMVAVAS 289
            +VDD+LN+ AFL KK+E L K +   Q+  +E +AE AK WEEWGPQ+ R ++E+  ++ R     +      K + + ++L   DNF+RA AA  P+++ E+A ++ Y  ++D +      LG++E+  +G PFD+N+H+A+M++PS E+ ED +C  + KGY V   ++RPAMV V++
Sbjct:  117 SVDDLLNTPAFLQKKIEALNKSMVKVQEQIDEADAEAAKEWEEWGPQISRAKREYQALRARMVNATMEASTTAKVKCLKEVLQAYDNFQRAQAAFKPQSEDEQAALDQYTKMFDDLNEVFTKLGMKEIPTVGEPFDFNLHSAVMQQPSDEYPEDTICLEYAKGYMVDGEMIRPAMVVVSA 296          
BLAST of mRNA_H-paniculata_contig1547.3200.1 vs. uniprot
Match: A0A448ZSA7_9STRA (GrpE protein homolog n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSA7_9STRA)

HSP 1 Score: 146 bits (369), Expect = 4.180e-39
Identity = 73/177 (41.24%), Postives = 113/177 (63.84%), Query Frame = 0
Query:  112 DDVLNSEAFLNKKVEMLKKQIAATQKNTEEVEAEGAKNWEEWGPQVERLQKEFTLIKNRGGEEAIRGRNKGKAEAINDILGVADNFERAAAAIAPETDGERAVVEYYKGVYDTMMGCLESLGLEEVENIGAPFDYNMHNAIMREPSTEFGEDVVCKVFQKGYRVGDTLVRPAMVAVA 288
            DD+L+S AFL +KVE+L+  IA T+++            EEWGPQ+E L++E+T I+ R  E+   G +  K   +  IL + DNF+RA+  I  ET+ ++A+   YK  Y  ++   + +G+ EVE +G  FDY +H A+M+ P +E+ E  VC+ FQKG+ +G++L+RPAMVAVA
Sbjct:   71 DDILSSPAFLKRKVEVLESDIAKTEEDLVAATERKEIAKEEWGPQLEALEREYTNIQQRMTEQNQEGDSDAKVRVVKGILDLLDNFDRASGVIVAETEADQAIEAAYKQAYQDILDKFKEMGVTEVETVGTEFDYELHQAVMQMPGSEYEEGFVCQEFQKGFIMGESLIRPAMVAVA 247          
BLAST of mRNA_H-paniculata_contig1547.3200.1 vs. uniprot
Match: A0A7S4AM71_9STRA (GrpE protein homolog n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AM71_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.640e-38
Identity = 75/178 (42.13%), Postives = 111/178 (62.36%), Query Frame = 0
Query:  111 VDDVLNSEAFLNKKVEMLKKQIAATQKNTEEVEAEGAKNWEEWGPQVERLQKEFTLIKNRGGEEAIRGRNKGKAEAINDILGVADNFERAAAAIAPETDGERAVVEYYKGVYDTMMGCLESLGLEEVENIGAPFDYNMHNAIMREPSTEFGEDVVCKVFQKGYRVGDTLVRPAMVAVA 288
            V+D+L+S AFL +K+E+L+  IA T++             EEWGPQ+E LQ+E+T I+ R  E+   G +  K   +  IL + DNF+RA+  I  ET+ E+ +   YK  Y  ++     +G+ EVE +G  FDY +H A+M+ P TE+ E VVCK FQKG+ + ++L+RPAMVAVA
Sbjct:   70 VNDILSSPAFLKRKLEVLESDIATTEEELVAATERKEIAKEEWGPQIEALQREYTNIQQRMTEQNQVGDSDAKVRVVKGILDLLDNFDRASGVIVAETEVEQTIEAGYKQAYQDILDQFAEMGVTEVETLGTEFDYELHQAVMQMPGTEYEEGVVCKEFQKGFIMDESLIRPAMVAVA 247          
BLAST of mRNA_H-paniculata_contig1547.3200.1 vs. uniprot
Match: A0A7S2VF25_9STRA (GrpE protein homolog n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VF25_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.930e-38
Identity = 72/177 (40.68%), Postives = 111/177 (62.71%), Query Frame = 0
Query:  113 DVLNSEAFLNKKVEMLKKQIAATQKNTEEVEAEGAKNWEEWGPQVERLQKEFTLIKNRGGEEAIRGRNKGKAEAINDILGVADNFERAAAAIAPETDGERAVVEYYKGVYDTMMGCLESLGLEEVENIGAPFDYNMHNAIMREPSTEFGEDVVCKVFQKGYRVGDTLVRPAMVAVAS 289
            D+LNS AFL +K+E+L+  IA  + +TEE  A       EWG Q++ LQKE+  I+ R   +  +G      +   ++L V DN++RA  A+ P  D E  +   YK  +D +M     LG+EE++ +G  FDY +H A+M++PS E+ E +VC+ FQKG+++GDTL+R +MVAVA+
Sbjct:   91 DILNSPAFLQRKLEVLQSDIAKVEADTEEARARLEAGKAEWGGQLDELQKEYQNIQERLNSQNKQGDTMAIVQVTREMLKVLDNYDRAFGAVTPSGDIEAEIEADYKSTWDDIMQTFSDLGVEEIKTVGVEFDYEVHQAVMQKPSDEYEEGIVCEEFQKGFKIGDTLIRASMVAVAA 267          
BLAST of mRNA_H-paniculata_contig1547.3200.1 vs. uniprot
Match: A0A7S0UHW3_9STRA (GrpE protein homolog n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UHW3_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.160e-37
Identity = 72/177 (40.68%), Postives = 109/177 (61.58%), Query Frame = 0
Query:  112 DDVLNSEAFLNKKVEMLKKQIAATQKNTEEVEAEGAKNWEEWGPQVERLQKEFTLIKNRGGEEAIRGRNKGKAEAINDILGVADNFERAAAAIAPETDGERAVVEYYKGVYDTMMGCLESLGLEEVENIGAPFDYNMHNAIMREPSTEFGEDVVCKVFQKGYRVGDTLVRPAMVAVA 288
            +D+LNS AFL +K+E+L+  IA   ++            EEWGPQ+E LQ+E+  I+ R  E+   G +  K   +  +L + DNF+RA+  I  ETD E+ +   YK  Y  ++   + +G+ EVE +G+ FDY +H A+M+ P TE+ E  VC+ FQKG+ +G+ L+RPAMVAVA
Sbjct:  107 NDILNSPAFLKRKLEVLESDIATADEDLAAATERKEVAKEEWGPQLEALQREYQNIQQRMTEQNQEGDSDAKVRVVKGVLDLLDNFDRASGVIVAETDEEKQIEAEYKQAYQDILDQFKKMGVMEVETVGSEFDYELHQAVMQMPGTEYEEGYVCQEFQKGFIMGEALIRPAMVAVA 283          
BLAST of mRNA_H-paniculata_contig1547.3200.1 vs. uniprot
Match: A0A7S3L4W1_9STRA (GrpE protein homolog n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4W1_9STRA)

HSP 1 Score: 140 bits (353), Expect = 8.440e-37
Identity = 71/187 (37.97%), Postives = 116/187 (62.03%), Query Frame = 0
Query:  103 TSRMAKDTVDDVLNSEAFLNKKVEMLKKQIAATQKNTEEVEAEGAKNWEEWGPQVERLQKEFTLIKNRGGEEAIRGRNKGKAEAINDILGVADNFERAAAAIAPETDGERAVVEYYKGVYDTMMGCLESLGLEEVENIGAPFDYNMHNAIMREPSTEFGEDVVCKVFQKGYRVGDTLVRPAMVAVAS 289
            T +   D+  D+LNS AFL +K+++LK  IA  ++     +    +   EW  Q++ LQKE+  I+ R G++  +G +    +   + L V DNF+RA   I  ETD ++ + E Y+  Y+ ++  L  LG+EEV+ +G  FDY +H A+M++PS E+ E +V + FQKG+++GDTL+R AMV+VA+
Sbjct:   56 TPQSNNDSSTDILNSPAFLKRKIDVLKSDIAKAEEGIAAAKQRLDEGKAEWEGQLDELQKEYQNIQARLGDQQKKGGSMAIVQVAREALKVLDNFDRAFGVITAETDSQKKIEEEYRTTYNEILTILADLGVEEVQTVGTEFDYEIHQAVMQKPSDEYEEGIVVEEFQKGFKLGDTLIRAAMVSVAA 242          
BLAST of mRNA_H-paniculata_contig1547.3200.1 vs. uniprot
Match: A0A7R9WM61_9STRA (GrpE protein homolog n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WM61_9STRA)

HSP 1 Score: 134 bits (336), Expect = 3.080e-34
Identity = 67/177 (37.85%), Postives = 109/177 (61.58%), Query Frame = 0
Query:  113 DVLNSEAFLNKKVEMLKKQIAATQKNTEEVEAEGAKNWEEWGPQVERLQKEFTLIKNRGGEEAIRGRNKGKAEAINDILGVADNFERAAAAIAPETDGERAVVEYYKGVYDTMMGCLESLGLEEVENIGAPFDYNMHNAIMREPSTEFGEDVVCKVFQKGYRVGDTLVRPAMVAVAS 289
            D+LNS AFL +K+E+L+  I              +   EEW  Q+++L+ E+  IK+R   +  +      +E  + IL + DNFER    + PETD E+A+ E Y+ V+  ++  LE LG+++VE +G  FDY +H A+M+  S E+ E+++C+ +QKG+ +G+ L+RPAMVAVA+
Sbjct:   70 DILNSPAFLQRKLEVLETDIKKADXXXXXXXXXXSAGKEEWQDQLDKLEVEYKTIKDRMSAQTDQNDVVATSEVASAILELVDNFERGFGIVIPETDEEKAIDEEYRKVHSDILATLEKLGVKQVETVGKEFDYEVHQAVMQRASEEYEENIICEEYQKGFVIGEKLIRPAMVAVAA 246          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1547.3200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBD7_ECTSI4.550e-9959.31GrpE protein homolog n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835ZCF7_9STRA1.730e-5854.75GrpE protein homolog n=1 Tax=Tribonema minus TaxID... [more]
H6WB81_VAULI7.710e-4946.07GrpE protein homolog n=1 Tax=Vaucheria litorea Tax... [more]
A0A7S2V1T8_9STRA2.910e-4338.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A448ZSA7_9STRA4.180e-3941.24GrpE protein homolog n=1 Tax=Pseudo-nitzschia mult... [more]
A0A7S4AM71_9STRA1.640e-3842.13GrpE protein homolog n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2VF25_9STRA1.930e-3840.68GrpE protein homolog n=1 Tax=Amphiprora paludosa T... [more]
A0A7S0UHW3_9STRA1.160e-3740.68GrpE protein homolog n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S3L4W1_9STRA8.440e-3737.97GrpE protein homolog n=1 Tax=Amphora coffeiformis ... [more]
A0A7R9WM61_9STRA3.080e-3437.85GrpE protein homolog n=1 Tax=Craspedostauros austr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 118..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..290
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.688
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR000740GrpE nucleotide exchange factorPRINTSPR00773GRPEPROTEINcoord: 158..174
score: 25.18
coord: 186..201
score: 41.8
coord: 241..256
score: 39.84
coord: 268..287
score: 49.22
IPR000740GrpE nucleotide exchange factorPFAMPF01025GrpEcoord: 122..288
e-value: 1.9E-34
score: 118.7
IPR000740GrpE nucleotide exchange factorPANTHERPTHR21237GRPE PROTEINcoord: 128..289
IPR000740GrpE nucleotide exchange factorPROSITEPS01071GRPEcoord: 244..287
IPR000740GrpE nucleotide exchange factorHAMAPMF_01151GrpEcoord: 61..289
score: 14.174
IPR009012GrpE nucleotide exchange factor, headGENE3D2.30.22.10coord: 233..289
e-value: 6.8E-18
score: 66.2
IPR009012GrpE nucleotide exchange factor, headSUPERFAMILY51064Head domain of nucleotide exchange factor GrpEcoord: 235..289
IPR013805GrpE nucleotide exchange factor, coiled-coilGENE3D3.90.20.20coord: 114..232
e-value: 1.3E-8
score: 36.4
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 141..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1547contigH-paniculata_contig1547:4232..6749 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1547.3200.1mRNA_H-paniculata_contig1547.3200.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1547 3817..6853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1547.3200.1 ID=prot_H-paniculata_contig1547.3200.1|Name=mRNA_H-paniculata_contig1547.3200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=291bp
MTCTIRSLVTVASILVANGVCAFVNVNGITSSVVSNGRHLCVPAKSTAPV
SHRSSRRWGKSEKEMMKDGSRGVGGVDKKHREGPFSSLRESFKKVVRKSP
FSTSRMAKDTVDDVLNSEAFLNKKVEMLKKQIAATQKNTEEVEAEGAKNW
EEWGPQVERLQKEFTLIKNRGGEEAIRGRNKGKAEAINDILGVADNFERA
AAAIAPETDGERAVVEYYKGVYDTMMGCLESLGLEEVENIGAPFDYNMHN
AIMREPSTEFGEDVVCKVFQKGYRVGDTLVRPAMVAVASP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000740GrpE
IPR009012GrpE_head
IPR013805GrpE_coiled_coil