prot_H-paniculata_contig1526.3095.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1526.3095.1
Unique Nameprot_H-paniculata_contig1526.3095.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length164
Homology
BLAST of mRNA_H-paniculata_contig1526.3095.1 vs. uniprot
Match: D7G2X6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2X6_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 2.090e-50
Identity = 90/147 (61.22%), Postives = 109/147 (74.15%), Query Frame = 0
Query:   21 MSVTAALSFVIVGACWGCTTPFIKDGTSVASNERTNDVDDKLSPDGE-----GVLSRVRHMLGPLRSLASMKAAVPFMLNQSGSLLFYVLLSSQDISMAVPVCNSLTFVFTAATALWLGEENERPLRTILGMALVLTGIAICVASKA 162
            M ++ ALSFV VGACWGCTTPFIKDGTS            KL PD +        +R+  + GPLRSLAS+KAA+PF+LNQSGS LFY LLSSQD+S AVPVCN+L+ VFTAATA+ LGE+ +RPLRT+ G+ L L G+A+CVASKA
Sbjct:    1 MPLSTALSFVAVGACWGCTTPFIKDGTS-----------SKLEPDTQQQPTTNENNRLGKLFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKA 136          
BLAST of mRNA_H-paniculata_contig1526.3095.1 vs. uniprot
Match: A0A448Z7G1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7G1_9STRA)

HSP 1 Score: 115 bits (287), Expect = 8.980e-30
Identity = 60/135 (44.44%), Postives = 90/135 (66.67%), Query Frame = 0
Query:   27 LSFVIVGACWGCTTPFIKDGTSVASNERTNDVDDKLSPDGEGVLSRVRHMLGPLRSLASMKAAVPFMLNQSGSLLFYVLLSSQDISMAVPVCNSLTFVFTAATALWLGEENERPLRTILGMALVLTGIAICVASK 161
            LS ++VGA WGCT P ++ G+S A    +    D  S DG    S    ++  LRS A++   +P++LNQSGS++FYVLL++ DISMAVP+CN++  +F+  T+  LGE  ++PLRT  G  L++ G+AICV+S+
Sbjct:    9 LSMLLVGALWGCTNPLLRKGSSDAEESSSAKRPD-ASDDGSXXDSSSSFLVSSLRSFANVGVWLPYVLNQSGSIVFYVLLANSDISMAVPICNAMALLFSFLTSSLLGEPIQKPLRTGAGAFLIMVGVAICVSSQ 142          
BLAST of mRNA_H-paniculata_contig1526.3095.1 vs. uniprot
Match: M4C2Y1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C2Y1_HYAAE)

HSP 1 Score: 112 bits (281), Expect = 5.590e-29
Identity = 67/143 (46.85%), Postives = 89/143 (62.24%), Query Frame = 0
Query:   23 VTAALSFVIVGACWGCTTPFIKDGTS--VASNERTNDVDDKLSPDGEGVLSRVRHMLGPLRSLASMKAAVPFMLNQSGSLLFYVLLSSQDISMAVPVCNSLTFVFTAATALWLGEENERPLRTILGMALVLTGIAICVASKAM 163
            V    SF+IVGA WGCT PFIK G++  V    + N + +  +  G GV+   + +L             PF LNQSGS+++  LL S DIS AVP+CNSLTFVFTA T+  LGE+ +RP+ T +GMALVL G+AIC  S+ +
Sbjct:    5 VPTLASFLIVGALWGCTNPFIKRGSNDDVMYTRKDNSMKE-FTNQGIGVVKNWKFVL-------------PFALNQSGSVVYVYLLGSADISHAVPICNSLTFVFTAITSRLLGEKPQRPICTYMGMALVLLGVAICFDSQTV 133          
BLAST of mRNA_H-paniculata_contig1526.3095.1 vs. uniprot
Match: A0A485KPY7_9STRA (Aste57867_9931 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPY7_9STRA)

HSP 1 Score: 112 bits (280), Expect = 7.910e-29
Identity = 65/139 (46.76%), Postives = 81/139 (58.27%), Query Frame = 0
Query:   23 VTAALSFVIVGACWGCTTPFIKDGTSVASNERTNDVDDKLSPDGEGVLSRVRHMLGPLRSLASMKAAVPFMLNQSGSLLFYVLLSSQDISMAVPVCNSLTFVFTAATALWLGEENERPLRTILGMALVLTGIAICVASK 161
            +   LSFV VGA WGCT P +K G+  A+ +R +D             S  ++      +L + K  +PF LNQSGS+ F   L S DISMAVP+CNS TFVFTA T+  LGE  + PL T  GM LVL G+AIC  SK
Sbjct:    2 IDTLLSFVFVGALWGCTNPLLKQGSGEAAYKRKDD-------------SFGQYAYEFFCTLTNWKFIIPFALNQSGSVAFVYFLGSADISMAVPICNSFTFVFTALTSRLLGERPKNPLFTYCGMILVLIGVAICFHSK 127          
BLAST of mRNA_H-paniculata_contig1526.3095.1 vs. uniprot
Match: W4H0X3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0X3_9STRA)

HSP 1 Score: 112 bits (280), Expect = 8.140e-29
Identity = 62/135 (45.93%), Postives = 82/135 (60.74%), Query Frame = 0
Query:   27 LSFVIVGACWGCTTPFIKDGTSVASNERTNDVDDKLSPDGEGVLSRVRHMLGPLRSLASMKAAVPFMLNQSGSLLFYVLLSSQDISMAVPVCNSLTFVFTAATALWLGEENERPLRTILGMALVLTGIAICVASK 161
            +SF+ VGA WGCT P +K G+  A+ +RT+D             S  +++     +L + K  +PF LNQSGS+ F   L S DISMAVP+CNS TFVFTA T+  LGE  + P  T +GM+ VL G+AIC  SK
Sbjct:    6 VSFMFVGALWGCTNPLLKQGSGSAAYQRTSD-------------SFGQYVYEFYCTLTNWKFIIPFALNQSGSIAFVYFLGSSDISMAVPICNSFTFVFTAITSRLLGERPKHPYYTYIGMSFVLLGVAICFHSK 127          
BLAST of mRNA_H-paniculata_contig1526.3095.1 vs. uniprot
Match: A0A2D4C7R2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7R2_PYTIN)

HSP 1 Score: 112 bits (279), Expect = 1.290e-28
Identity = 65/144 (45.14%), Postives = 90/144 (62.50%), Query Frame = 0
Query:   21 MSVTAALSFVIVGACWGCTTPFIKDGTSVA-SNERTNDVDDKLSPDGEGVLSRVRHMLGPLRSLASMKAAVPFMLNQSGSLLFYVLLSSQDISMAVPVCNSLTFVFTAATALWLGEENERPLRTILGMALVLTGIAICVASKAM 163
            M+ T  LSF++V A WGCT P IK GTS + +  R + V  +     +  L++  H +       + +  VPF+LNQSGS+ F  LL+S +IS AVP+CNSLTFVFTA T+  LGE   RPL T  G+AL+L G+ +C  +KA+
Sbjct:    1 MATTTLLSFLLVSALWGCTNPLIKRGTSQSPAGSRADAVYTRRDNSVKEWLAQALHWI------RNWQFVVPFLLNQSGSVAFVHLLASAEISSAVPICNSLTFVFTAITSRVLGEVPRRPLWTYTGVALILAGVFVCFQAKAL 138          
BLAST of mRNA_H-paniculata_contig1526.3095.1 vs. uniprot
Match: A0A7S2V8D6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8D6_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.100e-28
Identity = 61/143 (42.66%), Postives = 86/143 (60.14%), Query Frame = 0
Query:   21 MSVTAALSFVIVGACWGCTTPFIKDGTSVASNERTNDVDDKLSPDGEGVLSR--VRHMLGPLRSLASMKAAVPFMLNQSGSLLFYVLLSSQDISMAVPVCNSLTFVFTAATALWLGEENERPLRTILGMALVLTGIAICVASK 161
            M +  A+ F++VGA WGCTTPF++ GT      + +   +      E  ++   +  +  PL  L   +AA+ + LNQ GSLL+Y LLSSQDIS+AVP+CNSLT VFTA T   LG       ++ LG++LV+ G+ ICV S 
Sbjct:    1 MEMQTAVFFILVGAMWGCTTPFMRTGTEETEKNKDDPATETRPVQNERKVAAGGIAKLFEPLLRLLRPQAALAYGLNQGGSLLYYYLLSSQDISLAVPICNSLTLVFTALTEWVLGTAVRDTWKSALGISLVIFGVTICVLSN 143          
BLAST of mRNA_H-paniculata_contig1526.3095.1 vs. uniprot
Match: G4Z987_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4Z987_PHYSP)

HSP 1 Score: 110 bits (274), Expect = 6.180e-28
Identity = 62/140 (44.29%), Postives = 84/140 (60.00%), Query Frame = 0
Query:   22 SVTAALSFVIVGACWGCTTPFIKDGTSVASNERTNDVDDKLSPDGEGVLSRVRHMLGPLRSLASMKAAVPFMLNQSGSLLFYVLLSSQDISMAVPVCNSLTFVFTAATALWLGEENERPLRTILGMALVLTGIAICVASK 161
            ++T  LSF+ VGA WGCT P IK G+            D +    +  L  ++  L  L  + + +  +PF LNQSGS+ +  LL S D+S AVP+CNSL FVFTA T+  LGE+ +RP+ T  GM L+LTG+AIC  SK
Sbjct:    4 ALTTLLSFLFVGALWGCTNPLIKRGSDA----------DVMYTRKDNSLEEMKKQL--LDLMKNWQFLLPFALNQSGSVAYVFLLGSTDVSNAVPICNSLAFVFTAITSRLLGEQPQRPISTYTGMTLILTGVAICFDSK 131          
BLAST of mRNA_H-paniculata_contig1526.3095.1 vs. uniprot
Match: A0A7S2CTM5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTM5_9STRA)

HSP 1 Score: 110 bits (274), Expect = 7.540e-28
Identity = 61/137 (44.53%), Postives = 84/137 (61.31%), Query Frame = 0
Query:   22 SVTAALSFVIVGACWGCTTPFIKDGTSVASNERTNDVDDKLSPDGEGVLSRVRHMLGPLRSLASMKAAVPFMLNQSGSLLFYVLLSSQDISMAVPVCNSLTFVFTAATALWLGEENERPLRTILGMALVLTGIAICV 158
            +V  A S V+VG  WGCT PF+K GT+  ++ +T   +   S DG          +  L +L   KA +P+++NQ GS+++Y+LL S DISMAVP+CNSLTFVFTA T   LGE    P+  + G+  VL G+ ICV
Sbjct:    4 TVYEAASLVLVGMLWGCTNPFLKHGTA-ENDTKTLSENGTASMDGMHSEPTSADGIKNLWTLLRWKALIPYVINQLGSVVYYILLGSADISMAVPICNSLTFVFTAITGWLLGERLGSPMCAVFGITCVLVGVTICV 139          
BLAST of mRNA_H-paniculata_contig1526.3095.1 vs. uniprot
Match: A0A225WLS3_9STRA (Putative membrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WLS3_9STRA)

HSP 1 Score: 109 bits (273), Expect = 9.010e-28
Identity = 64/142 (45.07%), Postives = 89/142 (62.68%), Query Frame = 0
Query:   22 SVTAALSFVIVGACWGCTTPFIKDGT--SVASNERTNDVDDKLSPDGEGVLSRVRHMLGPLRSLASMKAAVPFMLNQSGSLLFYVLLSSQDISMAVPVCNSLTFVFTAATALWLGEENERPLRTILGMALVLTGIAICVASK 161
            +++  LSF+ VGA WGCT P IK G+  SV    ++N V +     G+ ++  V++           +  +PF LNQSGS+++  LL S DIS AVP+CNSLTFVFTA T+  LGE+ +RP+ T  GM L+L G+AIC  SK
Sbjct:    4 TISTLLSFLFVGALWGCTNPLIKRGSNDSVMYTRKSNSVGEF----GKQLIGLVKNW----------QFVLPFALNQSGSVVYVYLLGSADISNAVPICNSLTFVFTAITSRLLGEKPQRPVSTYTGMFLILLGVAICFDSK 131          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1526.3095.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2X6_ECTSI2.090e-5061.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A448Z7G1_9STRA8.980e-3044.44Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
M4C2Y1_HYAAE5.590e-2946.85Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A485KPY7_9STRA7.910e-2946.76Aste57867_9931 protein n=1 Tax=Aphanomyces stellat... [more]
W4H0X3_9STRA8.140e-2945.93Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A2D4C7R2_PYTIN1.290e-2845.14Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S2V8D6_9STRA4.100e-2842.66Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
G4Z987_PHYSP6.180e-2844.29Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A7S2CTM5_9STRA7.540e-2844.53Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A225WLS3_9STRA9.010e-2845.07Putative membrane protein n=1 Tax=Phytophthora meg... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018908Putative transmembrane family 234PFAMPF10639TMEM234coord: 29..158
e-value: 4.7E-30
score: 104.0
IPR018908Putative transmembrane family 234PANTHERPTHR28668FAMILY NOT NAMEDcoord: 24..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..112
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..139
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..35
score: 5.0
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 90..159
NoneNo IPR availableTMHMMTMhelixcoord: 143..160
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1526contigH-paniculata_contig1526:6812..12557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1526.3095.1mRNA_H-paniculata_contig1526.3095.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1526 6230..12593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1526.3095.1 ID=prot_H-paniculata_contig1526.3095.1|Name=mRNA_H-paniculata_contig1526.3095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
MTLEHKLKVFANRERQKGGKMSVTAALSFVIVGACWGCTTPFIKDGTSVA
SNERTNDVDDKLSPDGEGVLSRVRHMLGPLRSLASMKAAVPFMLNQSGSL
LFYVLLSSQDISMAVPVCNSLTFVFTAATALWLGEENERPLRTILGMALV
LTGIAICVASKAM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018908TMEM234