prot_H-paniculata_contig14962.2948.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14962.2948.1
Unique Nameprot_H-paniculata_contig14962.2948.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length193
Homology
BLAST of mRNA_H-paniculata_contig14962.2948.1 vs. uniprot
Match: A0A2K3MX29_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MX29_TRIPR)

HSP 1 Score: 99.8 bits (247), Expect = 7.320e-21
Identity = 61/126 (48.41%), Postives = 80/126 (63.49%), Query Frame = 0
Query:   67 EPKSAAEALKG-KWRAAMEEEWRVLVDNRAWESEDPGRLPTARKAIHTKYIFKRKLKEDGSVARYKSRRVAQGLSQVECEDFFETSAPVARMPTLRTVSSLAAEHEFELEGMDVDAAQLNASVEED 191
            EP S AEA+K  KWR AM+EE R L DN  W  ED   LP+ +KAI  K+I+K K   DGS+ R+K+R V  G  QVE  D+ ET AP A+M T+RT  ++AA   F+L  MDV  A L+  ++E+
Sbjct:  690 EPNSFAEAVKDEKWRDAMKEEIRALEDNGTWTIED---LPSGKKAIGCKWIYKIKYNSDGSIERHKARLVIHGNRQVEGVDYNETFAPTAKMVTVRTFLAVAAAKNFQLHQMDVRNAFLHGDLDEE 812          
BLAST of mRNA_H-paniculata_contig14962.2948.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI)

HSP 1 Score: 97.1 bits (240), Expect = 1.420e-20
Identity = 60/133 (45.11%), Postives = 81/133 (60.90%), Query Frame = 0
Query:   63 VSKGEPKSAAEALKG----KWRAAMEEEWRVLVDNRAWESEDPGRLPTARKAIHTKYIFKRKLKEDGSVARYKSRRVAQGLSQVECEDFFETSAPVARMPTLRTVSSLAAEHEFELEGMDVDAAQLNASVEED 191
            V KGEP S  EA+KG    KW+ A+ EE   +  N  W       LP  R+ I  K+IFK+KL E+G+V RYK+R VA+G SQ E  D+ ET APV R  T+RT+ + AA +++E+   DV  A LN  +EE+
Sbjct:  169 VEKGEPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVK--NLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFDVKTAFLNGDLEEE 299          
BLAST of mRNA_H-paniculata_contig14962.2948.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI)

HSP 1 Score: 97.1 bits (240), Expect = 5.810e-20
Identity = 60/133 (45.11%), Postives = 81/133 (60.90%), Query Frame = 0
Query:   63 VSKGEPKSAAEALKG----KWRAAMEEEWRVLVDNRAWESEDPGRLPTARKAIHTKYIFKRKLKEDGSVARYKSRRVAQGLSQVECEDFFETSAPVARMPTLRTVSSLAAEHEFELEGMDVDAAQLNASVEED 191
            V KGEP S  EA+KG    KW+ A+ EE   +  N  W       LP  R+ I  K+IFK+KL E+G+V RYK+R VA+G SQ E  D+ ET APV R  T+RT+ + AA +++E+   DV  A LN  +EE+
Sbjct:  544 VEKGEPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVK--NLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFDVKTAFLNGDLEEE 674          
BLAST of mRNA_H-paniculata_contig14962.2948.1 vs. uniprot
Match: UPI001968051C (LOW QUALITY PROTEIN: uncharacterized protein LOC11424688 n=1 Tax=Medicago truncatula TaxID=3880 RepID=UPI001968051C)

HSP 1 Score: 94.0 bits (232), Expect = 7.330e-19
Identity = 58/149 (38.93%), Postives = 93/149 (62.42%), Query Frame = 0
Query:   53 VEGTG---NLTGEVS---KGEPKSAAEALKGK----WRAAMEEEWRVLVDNRAWESEDPGRLPTARKAIHTKYIFKRKLKEDGSVARYKSRRVAQGLSQVECEDFFETSAPVARMPTLRTVSSLAAEHEFELEGMDVDAAQLNASVEED 191
            VEGTG   N  G +    + +P +  EA+K +    W+ A++EE   ++ N+ W+  D   LP   K I  K+IFKRK+K DG++ ++K+R VA+G +Q E  D+F+T APVAR+ ++R + +LA+ H+F +  MDV  A LN  ++E+
Sbjct:  625 VEGTGKSINSYGPICFNLESDPVTYEEAIKSQDSAFWKEAIQEEMDSIMGNKTWKVVD---LPPGSKPIGCKWIFKRKMKVDGTIDKFKARLVAKGFTQKEGLDYFDTYAPVARIASIRMLIALASIHKFVIHQMDVKTAFLNGELDEE 770          
BLAST of mRNA_H-paniculata_contig14962.2948.1 vs. uniprot
Match: A0A4Y1R7U6_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R7U6_PRUDU)

HSP 1 Score: 90.1 bits (222), Expect = 7.650e-19
Identity = 44/113 (38.94%), Postives = 75/113 (66.37%), Query Frame = 0
Query:   79 WRAAMEEEWRVLVDNRAWESEDPGRLPTARKAIHTKYIFKRKLKEDGSVARYKSRRVAQGLSQVECEDFFETSAPVARMPTLRTVSSLAAEHEFELEGMDVDAAQLNASVEED 191
            W+ A+ +E++ ++ N  W   +   LP   KAI  K++F++KLK DGS+ +YK+R VA+G +Q +  D+F+T +PV+R+ T+RT+ +LA+ H   +  MDV  A LN  ++E+
Sbjct:    8 WKEAINDEFQSIIQNNTWMLTN---LPAGNKAIGCKWVFRKKLKPDGSIDKYKARLVAKGFTQKKGIDYFDTYSPVSRITTIRTLIALASVHNLVIHQMDVKTAFLNGDLDEE 117          
BLAST of mRNA_H-paniculata_contig14962.2948.1 vs. uniprot
Match: A0A5N6NXZ8_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NXZ8_9ASTR)

HSP 1 Score: 93.6 bits (231), Expect = 9.290e-19
Identity = 53/129 (41.09%), Postives = 82/129 (63.57%), Query Frame = 0
Query:   67 EPKSAAEALKGK----WRAAMEEEWRVLVDNRAWESEDPGRLPTARKAIHTKYIFKRKLKEDGSVARYKSRRVAQGLSQVECEDFFETSAPVARMPTLRTVSSLAAEHEFELEGMDVDAAQLNASVEED 191
            +PK+ +EA+  +    W+ A+++E   ++ N+ W+  D   LP   K + +K+IFK+K+K DGS+ +YK+R V QG  Q E  DFF+T APVAR+ T+R + +LAA H   +  MDV  A LN  +EE+
Sbjct:  576 DPKTFSEAMNSRDTNFWKEAVQDEIDSIMHNKTWKLTD---LPPGCKPLGSKWIFKKKMKVDGSIDKYKARLVIQGFRQKEGIDFFDTYAPVARISTIRLLLALAAIHNLIIHQMDVKNAFLNGELEEE 701          
BLAST of mRNA_H-paniculata_contig14962.2948.1 vs. uniprot
Match: A0A151TIH6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TIH6_CAJCA)

HSP 1 Score: 93.2 bits (230), Expect = 1.380e-18
Identity = 57/126 (45.24%), Postives = 80/126 (63.49%), Query Frame = 0
Query:   67 EPKSAAEALKGK-WRAAMEEEWRVLVDNRAWESEDPGRLPTARKAIHTKYIFKRKLKEDGSVARYKSRRVAQGLSQVECEDFFETSAPVARMPTLRTVSSLAAEHEFELEGMDVDAAQLNASVEED 191
            EP S  EA+  K WR+AMEEE R +  N  WE  +   LP  +  I  K++FK KLK DGSVA++K+R VA+G  Q E  D+ E  APVAR+ T+R + +LA+   ++L  +DV +A LN  ++ED
Sbjct:  805 EPISLDEAITSKEWRSAMEEELRSIEKNHTWEMVE---LPQNKTPIDVKWVFKIKLKPDGSVAKHKARLVAKGFMQREGIDYSEVFAPVARLETVRLIVALASWRNWKLWQLDVKSAFLNGPLDED 927          
BLAST of mRNA_H-paniculata_contig14962.2948.1 vs. uniprot
Match: C6JRI2_SORBI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sorghum bicolor TaxID=4558 RepID=C6JRI2_SORBI)

HSP 1 Score: 92.8 bits (229), Expect = 1.700e-18
Identity = 48/113 (42.48%), Postives = 73/113 (64.60%), Query Frame = 0
Query:   79 WRAAMEEEWRVLVDNRAWESEDPGRLPTARKAIHTKYIFKRKLKEDGSVARYKSRRVAQGLSQVECEDFFETSAPVARMPTLRTVSSLAAEHEFELEGMDVDAAQLNASVEED 191
            W+ A++ E   ++ N  WE  D    P   K +  K++FK+KL+ DG++ +YK+R VA+G +Q E ED+F+T +PVAR+ T+R + SLAA H F +  MDV  A LN  +EE+
Sbjct:  201 WKEAVQSEMDSIMSNGTWEVVD---RPFGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDYFDTYSPVARLTTIRVLLSLAASHGFLIHQMDVKTAFLNGELEEE 310          
BLAST of mRNA_H-paniculata_contig14962.2948.1 vs. uniprot
Match: A0A151RWU2_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RWU2_CAJCA)

HSP 1 Score: 92.0 bits (227), Expect = 1.730e-18
Identity = 55/126 (43.65%), Postives = 82/126 (65.08%), Query Frame = 0
Query:   67 EPKSAAEAL-KGKWRAAMEEEWRVLVDNRAWESEDPGRLPTARKAIHTKYIFKRKLKEDGSVARYKSRRVAQGLSQVECEDFFETSAPVARMPTLRTVSSLAAEHEFELEGMDVDAAQLNASVEED 191
            EP +  EA+ K  WR+AMEEE + +  N  WE  +   LP  +K I  K++FK KLK DGS+A++K+R VA+G  Q E  D+ E  APVAR+ T+R + +LA+   ++L  +DV +A LN S++E+
Sbjct:  195 EPITFEEAISKEVWRSAMEEELKSIEKNDTWEMVN---LPQNKKVIVVKWVFKTKLKSDGSIAKHKARLVAKGFMQKEGIDYSEVFAPVARLETVRLIVALASWRNWKLWQLDVKSAFLNGSLDEE 317          
BLAST of mRNA_H-paniculata_contig14962.2948.1 vs. uniprot
Match: Q2R3G9_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q2R3G9_ORYSJ)

HSP 1 Score: 92.8 bits (229), Expect = 1.860e-18
Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 0
Query:   68 PKSAAEALKGK----WRAAMEEEWRVLVDNRAWESEDPGRLPTARKAIHTKYIFKRKLKEDGSVARYKSRRVAQGLSQVECEDFFETSAPVARMPTLRTVSSLAAEHEFELEGMDVDAAQLNASVEED 191
            PKS +EA        W+ A+  E   ++ N  WE  +    P   K +  K++FK+KL+ DG++ +YK+R VA+G +Q ECEDFF+T +PVAR+ T+R + SL A H   +  MDV  A LN  ++E+
Sbjct:  755 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE---RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKECEDFFDTYSPVARLTTIRVLLSLPASHGLLVHQMDVKTAFLNGELDEE 879          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14962.2948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2K3MX29_TRIPR7.320e-2148.41Retrovirus-related Pol polyprotein from transposon... [more]
A0A0J7K416_LASNI1.420e-2045.11Lectin receptor kinase n=1 Tax=Lasius niger TaxID=... [more]
A0A0J7KM48_LASNI5.810e-2045.11Integrase catalytic domain-containing protein n=2 ... [more]
UPI001968051C7.330e-1938.93LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
A0A4Y1R7U6_PRUDU7.650e-1938.94Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A5N6NXZ8_9ASTR9.290e-1941.09Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A151TIH6_CAJCA1.380e-1845.24Retrovirus-related Pol polyprotein from transposon... [more]
C6JRI2_SORBI1.700e-1842.48Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151RWU2_CAJCA1.730e-1843.65Retrovirus-related Pol polyprotein from transposon... [more]
Q2R3G9_ORYSJ1.860e-1839.84Retrotransposon protein, putative, Ty1-copia subcl... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 104..190
e-value: 5.5E-19
score: 68.8
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 67..191
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 67..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14962contigH-paniculata_contig14962:954..1781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14962.2948.1mRNA_H-paniculata_contig14962.2948.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14962 434..2273 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14962.2948.1 ID=prot_H-paniculata_contig14962.2948.1|Name=mRNA_H-paniculata_contig14962.2948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
MERTAAPASRGNTTKQSGMKVQRPRDRSPIRTRARGRENRKEDPGATAGV
AKVEGTGNLTGEVSKGEPKSAAEALKGKWRAAMEEEWRVLVDNRAWESED
PGRLPTARKAIHTKYIFKRKLKEDGSVARYKSRRVAQGLSQVECEDFFET
SAPVARMPTLRTVSSLAAEHEFELEGMDVDAAQLNASVEEDS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like