prot_H-paniculata_contig14952.2946.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14952.2946.1
Unique Nameprot_H-paniculata_contig14952.2946.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
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BLAST of mRNA_H-paniculata_contig14952.2946.1 vs. uniprot
Match: D7FMG7_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG7_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 6.920e-91
Identity = 131/178 (73.60%), Postives = 152/178 (85.39%), Query Frame = 0 
Query:    1 DPSVILTWCIALCMVIPQAGLKPPLCQAQKTFARNIDHRASQEEPIPICPLLWPIARQIAGAANDLGINDPCYRHQWWTAVELVESPLPEGFSRVVKEDGTLAYRWPKASATPGKIGAHPRLEDFIAKIDYDSKLSTSHLRRSEPTVSKG-----LATSHPIRCFVACFKGDLTSVRR 173
            D SV+L WCI L  +IP+AG KPPLCQAQKTFAR IDHRA+ EEP+P+CPLLWP+ARQ+A AANDLGINDPCYRHQWW+AVELVESPLP+GF RVV+EDGTLAYR+PK+S TPGKIG HP L+D++ KIDYDSKLSTSHLRRS     +      LA SHPIRCFV+CF+GDLT++RR
Sbjct:  468 DASVVLLWCIGLSAIIPEAGRKPPLCQAQKTFARKIDHRATDEEPVPLCPLLWPVARQVASAANDLGINDPCYRHQWWSAVELVESPLPDGFGRVVREDGTLAYRYPKSSETPGKIGTHPLLQDYMDKIDYDSKLSTSHLRRSSRDTRRSSGGQALAASHPIRCFVSCFRGDLTAIRR 645
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BLAST of mRNA_H-paniculata_contig14952.2946.1 vs. uniprot
Match: A0A6H5JIF4_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIF4_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 2.680e-89
Identity = 131/178 (73.60%), Postives = 153/178 (85.96%), Query Frame = 0 
Query:    1 DPSVILTWCIALCMVIPQAGLKPPLCQAQKTFARNIDHRASQEEPIPICPLLWPIARQIAGAANDLGINDPCYRHQWWTAVELVESPLPEGFSRVVKEDGTLAYRWPKASATPGKIGAHPRLEDFIAKIDYDSKLSTSHLRRSE-----PTVSKGLATSHPIRCFVACFKGDLTSVRR 173
            D SV+L WCI L  +IP+AG KPPLCQAQKTFAR +DHRA+ EEPIP+CPLLWP+ARQ+A AANDLGINDPCYRHQWW+AVELVESPLP+GF RVV+EDGTLAYR+PK+S TPGKIG HP L+D++ KIDYDSKLSTSHLRRS       +  + LA SHPIRCFV+CF+GDLT++RR
Sbjct: 1282 DASVVLLWCIGLSAIIPEAGRKPPLCQAQKTFARKVDHRATDEEPIPLCPLLWPVARQVASAANDLGINDPCYRHQWWSAVELVESPLPDGFGRVVREDGTLAYRYPKSSETPGKIGTHPLLQDYMDKIDYDSKLSTSHLRRSSRDSRRTSGGQALAASHPIRCFVSCFRGDLTAIRR 1459
[Close]
BLAST of mRNA_H-paniculata_contig14952.2946.1 vs. uniprot
Match: A0A6H5KKJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ7_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.530e-28
Identity = 51/67 (76.12%), Postives = 60/67 (89.55%), Query Frame = 0 
Query:   62 AANDLGINDPCYRHQWWTAVELVESPLPEGFSRVVKEDGTLAYRWPKASATPGKIGAHPRLEDFIAK 128
            AANDLGINDPCY HQWW+AVELVESPLP+GF RVV+EDGTLAYR+PK+  +PGKIG HP L+D++ K
Sbjct:  716 AANDLGINDPCYCHQWWSAVELVESPLPDGFGRVVREDGTLAYRYPKSLESPGKIGTHPLLQDYMDK 782
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14952.2946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMG7_ECTSI6.920e-9173.60Ankyrin repeat domain protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JIF4_9PHAE2.680e-8973.60Myosin motor domain-containing protein n=1 Tax=Ect... [more]
A0A6H5KKJ7_9PHAE1.530e-2876.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.532

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14952contigH-paniculata_contig14952:250..4871 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14952.2946.1mRNA_H-paniculata_contig14952.2946.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14952 250..4871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14952.2946.1 ID=prot_H-paniculata_contig14952.2946.1|Name=mRNA_H-paniculata_contig14952.2946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
DPSVILTWCIALCMVIPQAGLKPPLCQAQKTFARNIDHRASQEEPIPICP
LLWPIARQIAGAANDLGINDPCYRHQWWTAVELVESPLPEGFSRVVKEDG
TLAYRWPKASATPGKIGAHPRLEDFIAKIDYDSKLSTSHLRRSEPTVSKG
LATSHPIRCFVACFKGDLTSVRR
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