prot_H-paniculata_contig14941.2943.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14941.2943.1
Unique Nameprot_H-paniculata_contig14941.2943.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length803
Homology
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BLAST of mRNA_H-paniculata_contig14941.2943.1 vs. uniprot
Match: D8LCH9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH9_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 6.470e-9
Identity = 26/39 (66.67%), Postives = 33/39 (84.62%), Query Frame = 0 
Query:    1 MVHVLSKECAHQGCSTRPSYGAPGTKKAEFCARHAEDGM 39
            M+HV +K C H GC+TR ++G PG+KKAEFC+RHAEDGM
Sbjct:    1 MIHVRAKTCDHVGCTTRANFGVPGSKKAEFCSRHAEDGM 39
[Close]
BLAST of mRNA_H-paniculata_contig14941.2943.1 vs. uniprot
Match: D8LMB1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB1_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 3.260e-6
Identity = 22/39 (56.41%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:    1 MVHVLSKECAHQGCSTRPSYGAPGTKKAEFCARHAEDGM 39
            MV V+++ C H GC+ RPS+G  G+KK EFCA+HA  GM
Sbjct:    1 MVDVVNRRCRHPGCTKRPSFGQDGSKKQEFCAQHAHQGM 39
[Close]
BLAST of mRNA_H-paniculata_contig14941.2943.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 1.380e-5
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 0 
Query:    7 KECAHQGCSTRPSYGAPGTKKAEFCARHAEDGM 39
            + CAH+ C   P+YG PGT+KAEFCA HA DGM
Sbjct:   15 RRCAHEDCVKHPTYGVPGTRKAEFCAPHALDGM 47
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14941.2943.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCH9_ECTSI6.470e-966.67EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LMB1_ECTSI3.260e-656.41EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5LBM3_9PHAE1.380e-563.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14941contigH-paniculata_contig14941:2801..5323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14941.2943.1mRNA_H-paniculata_contig14941.2943.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14941 1639..5346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14941.2943.1 ID=prot_H-paniculata_contig14941.2943.1|Name=mRNA_H-paniculata_contig14941.2943.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=803bp
MVHVLSKECAHQGCSTRPSYGAPGTKKAEFCARHAEDGMVHVLSRKCSHE
GCFTRPSYGVRGTKKAEFCARHAGDGMVHVLSKKCSHEGCFTRPSYGVPG
TKKAEFCARHAGDGMVHVLSKKCSHEGCSINPSYGLAGTTKAEYCARHAG
DGMVDVRSKCCSREGCSINASYGLVGTKKAEYCARHAGEGMVHMLNKKCS
HEGCYTQPSYGLVGTKKAEYCARHVGDGMVHVLSKNCSHEGCSTQPSYGL
VGTTKAEYCARHCGDGMVDVLSKKCSHEGCSTHPSYGMVGTKKAEYCAQH
AGEGMVHVRSKSCSHEGCSTHPSYGLVGTTKAEYCARHAGNGMMDVRNKK
CTYEGCSTQPSYGLVGTKKAEYCAQHAGHGMVHVRGKSCSQEGCSVNASY
GMVGTTKAEYCARHAGDGMVDVRNKKCSYEGCCTQPSYGMVGTKKAEYCA
RHAGEGMVDVLSKKCSHEGCSISASYGLVGTKKAEYCAQHAGDGMVHVLS
KKCSHVGCSTQPSYGLVGAKKAEYCARHAGDGMVDVLSKRCFHKGCSTHP
SYGMVGTKKAEYCARHAGDGMVDVRNKKCFHEGCSINPSYELMGSKKAKV
RARHAGYGIVDVRNKECSHEICSTRPSFGLAGTRRGEFCVQHVKDETVNV
STGQSMSSSRRLNELSSRSQVKVEVAPQHIDGSGGYSEILEKGRKRHAAP
TLHSHSVGFTSRESHSAKQARMSNRSSVSEGLALCTPSPDVSSLDDRAMV
KTEVAASRCSVPELIIAAALTTAGHGGIETDGELKHDKVVDNDDLAVFPI
QT*
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