prot_H-paniculata_contig1494.2941.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1494.2941.1
Unique Name	prot_H-paniculata_contig1494.2941.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	98

Homology

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BLAST of mRNA_H-paniculata_contig1494.2941.1 vs. uniprot
Match: A0A6H5KK08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK08_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 7.420e-15
Identity = 44/98 (44.90%), Postives = 59/98 (60.20%), Query Frame = 0

Query:    1 MQRARVEPEHATEAVETVHSGRMTYRAAADTFGISVGSLQKRVCGIVGIAGMVDSGTVLSTEEEKCLEDTMKFATARHVGLNRDDLKEVAMVLCSDNR 98
            M RARV+PE A +A++ V SG M++R AADT+G++  SL +RV   V I   V  GTVL  EEE  +ED +  A    + L R +LKE    +C D R
Sbjct:    1 MGRARVDPERAQKAIDAVRSGEMSFRVAADTYGLNPTSLHRRVKKEVAIDARVGPGTVLCKEEEDFVEDVLMHAFRHFLLLGRGELKEAVRKICLDGR 98

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1494.2941.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1494.2941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KK08_9PHAE	7.420e-15	44.90	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007889	DNA binding HTH domain, Psq-type	PFAM	PF05225	HTH_psq	coord: 12..46 e-value: 6.4E-6 score: 25.8
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 7..49

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1494	contig	H-paniculata_contig1494:11942..12235 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1494.2941.1	mRNA_H-paniculata_contig1494.2941.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1494 11942..12235 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1494.2941.1 ID=prot_H-paniculata_contig1494.2941.1|Name=mRNA_H-paniculata_contig1494.2941.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp
MQRARVEPEHATEAVETVHSGRMTYRAAADTFGISVGSLQKRVCGIVGIA
GMVDSGTVLSTEEEKCLEDTMKFATARHVGLNRDDLKEVAMVLCSDNR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007889	HTH_Psq
IPR009057	Homeobox-like_sf