prot_H-paniculata_contig14936.2938.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14936.2938.1
Unique Nameprot_H-paniculata_contig14936.2938.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length91
Homology
[Close]
BLAST of mRNA_H-paniculata_contig14936.2938.1 vs. uniprot
Match: A0A7S4DJB2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJB2_HETAK)

HSP 1 Score: 48.5 bits (114), Expect = 6.500e-5
Identity = 27/88 (30.68%), Postives = 42/88 (47.73%), Query Frame = 0 
Query:    1 GDVIGEDCVLGFETRQYQVVALTPRVQVCVVSRENALLYLTSGELDQLHDQTSDLYRYAGGSSKSYFKAVKGWQDATKLKLEAIGPSY 88
            GD  GEDCVLG+  R YQVVAL        ++R +    L+  +++Q+  +T  LY       + Y +     +    L+   +GP Y
Sbjct:   25 GDHFGEDCVLGYNFRCYQVVALEDETVCLAINRGDIERNLSKTDIEQIRQETRALYVPDEELYRKYRQITDSQKIIAHLRNRELGPGY 112
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14936.2938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S4DJB2_HETAK6.500e-530.68Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14936contigH-paniculata_contig14936:304..2358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14936.2938.1mRNA_H-paniculata_contig14936.2938.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14936 304..2358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14936.2938.1 ID=prot_H-paniculata_contig14936.2938.1|Name=mRNA_H-paniculata_contig14936.2938.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bp
GDVIGEDCVLGFETRQYQVVALTPRVQVCVVSRENALLYLTSGELDQLHD
QTSDLYRYAGGSSKSYFKAVKGWQDATKLKLEAIGPSYRRR
back to top