prot_H-paniculata_contig14929.2933.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14929.2933.1
Unique Nameprot_H-paniculata_contig14929.2933.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length141
Homology
BLAST of mRNA_H-paniculata_contig14929.2933.1 vs. uniprot
Match: D8LDY9_ECTSI (Channel voltage activated chloride channel (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY9_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 1.240e-62
Identity = 102/156 (65.38%), Postives = 117/156 (75.00%), Query Frame = 0
Query:    1 LPFLEDEVPSVASRNDMTASQAMSRRVRCLRPLERAGAVLDTLSSCEHDCFPVVDDQGGDILVGTILRKCLMILLHEKAFGPEDSLGTNAATGRPQVVSAVA---------------ASGRISPLVSWEAMESVYPRYPTIESVRLSEEERRGWID 141
            LPFLEDE PSVA +NDMTASQAMSRRVRCLRPLERAGAV DTL++C+HDCFPVVDD+GGD+LVGTILRKCLM+LLH+KAFGP   +GT    G+    SA                 AS  ISP +SW AME +YPRYPTIES+ LS+ ERR W+D
Sbjct:   35 LPFLEDECPSVARQNDMTASQAMSRRVRCLRPLERAGAVFDTLNACQHDCFPVVDDEGGDVLVGTILRKCLMLLLHQKAFGP---VGTELGDGQQNSRSAARQHQGRXXXXXXXXXDASLGISPPISWGAMERIYPRYPTIESIDLSDAERRMWMD 187          
BLAST of mRNA_H-paniculata_contig14929.2933.1 vs. uniprot
Match: A0A836CAG3_9STRA (Chloride channel protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG3_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.390e-33
Identity = 62/141 (43.97%), Postives = 90/141 (63.83%), Query Frame = 0
Query:    1 LPFLEDEVPSVASRNDMTASQAMSRRVRCLRPLERAGAVLDTLSSCEHDCFPVVDDQGGDILVGTILRKCLMILLHEKAFGPEDSLGTNAATGRPQVVSAVAASGRISPLVSWEAMESVYPRYPTIESVRLSEEERRGWID 141
            LPFLEDE+P++A++ ++TA Q M+  V+CLRP+ER G V D L + EHDCFPVVD Q G++L+GT+LRKCL +LL  + F P           RP               V++E +E  YPRYPTI+ + ++ ++R+ W+D
Sbjct:  486 LPFLEDELPALAAKGEVTAGQIMTTTVKCLRPIERVGYVYDALRNTEHDCFPVVDTQTGNVLMGTVLRKCLCVLLQRRHFSPNRGYSRGE---RP---------------VTFETLEKDYPRYPTIQEITIANDDRQSWLD 608          
BLAST of mRNA_H-paniculata_contig14929.2933.1 vs. uniprot
Match: A0A7R9ZRT7_9STRA (Chloride channel protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRT7_9STRA)

HSP 1 Score: 121 bits (304), Expect = 8.020e-31
Identity = 60/141 (42.55%), Postives = 80/141 (56.74%), Query Frame = 0
Query:    1 LPFLEDEVPSVASRNDMTASQAMSRRVRCLRPLERAGAVLDTLSSCEHDCFPVVDDQGGDILVGTILRKCLMILLHEKAFGPEDSLGTNAATGRPQVVSAVAASGRISPLVSWEAMESVYPRYPTIESVRLSEEERRGWID 141
            +PF+E EVP +A R+++ A Q MS +V+CLRP+ERAG V   L    H  FP+VD   G  L GT  R  L  LL  +AFG  D L  +   G            R+SPLV W+ +E  YPRYPTI+ V + E ++  W+D
Sbjct:  110 IPFMEPEVPPIAERHEIVAGQVMSTKVKCLRPVERAGLVYQLLKESSHGTFPIVDAASGGTLYGTASRAMLCTLLQRRAFGSPDVLEEDDINGS-------LGPRRLSPLVQWDTIERAYPRYPTIDDVDMRESDQNCWLD 243          
BLAST of mRNA_H-paniculata_contig14929.2933.1 vs. uniprot
Match: A0A7S2XUS9_9STRA (Chloride channel protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS9_9STRA)

HSP 1 Score: 125 bits (314), Expect = 8.670e-31
Identity = 60/141 (42.55%), Postives = 89/141 (63.12%), Query Frame = 0
Query:    1 LPFLEDEVPSVASRNDMTASQAMSRRVRCLRPLERAGAVLDTLSSCEHDCFPVVDDQGGDILVGTILRKCLMILLHEKAFGPEDSLGTNAATGRPQVVSAVAASGRISPLVSWEAMESVYPRYPTIESVRLSEEERRGWID 141
            LP+LE++V   A  NDM A+Q M + VRCLRP+E+ G + D L+S +H CFPVVD   G +LVG++LRK L +++ +KAFGP   +  + ++ +           R+SPL+ W  +E +YPRYP  E + ++  ER  WID
Sbjct:  416 LPYLEEDVDRPARMNDMIANQVMCKDVRCLRPVEKVGVIYDLLTSTQHHCFPVVDQGRGGVLVGSVLRKTLSVVIEQKAFGP---MSVDHSSKQ-----------RLSPLLQWGVLEGMYPRYPNPEDLIVTSAERECWID 542          
BLAST of mRNA_H-paniculata_contig14929.2933.1 vs. uniprot
Match: B8LCA7_THAPS (Chloride channel protein (Fragment) n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8LCA7_THAPS)

HSP 1 Score: 118 bits (295), Expect = 3.930e-28
Identity = 63/145 (43.45%), Postives = 81/145 (55.86%), Query Frame = 0
Query:    1 LPFLEDEVPSVASRNDMTASQAMSRRVRCLRPLERAGAVLDTLSSCEHDCFPVVDD---QGGDILVGTILRKCLMILLHEKAFG-PEDSLGTNAATGRPQVVSAVAASGRISPLVSWEAMESVYPRYPTIESVRLSEEERRGWID 141
            +PFLE EVP++A R+++ A Q MS  V+CLRP+ER G V D L + +H  FP+VD         L GT  R  L  LL  +AFG P D LG                  R+SPLV W+ +E VYPRYPTI+ V L   +R  W+D
Sbjct:  502 IPFLEPEVPTIAERHEIVAGQVMSTEVKCLRPVERVGIVYDLLKNVQHGNFPIVDTGELTSSGTLYGTASRSMLCTLLQRRAFGQPHDMLGPK----------------RLSPLVQWDTIERVYPRYPTIDDVELRPGDRNCWLD 630          
BLAST of mRNA_H-paniculata_contig14929.2933.1 vs. uniprot
Match: K0RAV9_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAV9_THAOC)

HSP 1 Score: 105 bits (261), Expect = 4.150e-26
Identity = 53/131 (40.46%), Postives = 72/131 (54.96%), Query Frame = 0
Query:   14 RNDMTASQAMSRRVRCLRPLERAGAVLDTLSSCEHDCFPVVDDQGGDILVGTILRKCLMILLHEKAFGPEDSLGTNAATGRPQVVSAVA---ASGRISPLVSWEAMESVYPRYPTIESVRLSEEERRGWID 141
            R+++ A Q MS  V+CLRP+ER G V D L +  H  FP+VD      L GT  R  L  LL  +AFG    +       +P     VA      R+SPLV W+ +E VYPRYPTI+ ++L + +R  W+D
Sbjct:    2 RHEIVAGQVMSTEVKCLRPVERVGIVYDLLKNVSHGNFPIVDTASSGTLYGTASRTMLCTLLQRRAFGQPLEVNNGHYHPKPDGADDVAELLGPKRLSPLVQWDTLERVYPRYPTIDDIKLRQNDRNCWLD 132          
BLAST of mRNA_H-paniculata_contig14929.2933.1 vs. uniprot
Match: A0A4D9D9F8_9STRA (Chloride channel protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9F8_9STRA)

HSP 1 Score: 111 bits (278), Expect = 8.460e-26
Identity = 58/141 (41.13%), Postives = 88/141 (62.41%), Query Frame = 0
Query:    2 PFLEDEVPSVASRNDMTASQAMSRRVRCLRPLERAGAVLDTLSSCEHDCFPVVDDQGGDILVGTILRKCLMILLHEKAFGPEDSLGTNAATGRPQVVSAVAASGRI-SPLVSWEAMESVYPRYPTIESVRLSEEERRGWID 141
            P LE ++P  A +N M A++ MS   +  R +ER   + D+L+S EHDCFPV++ + G++LVGT+LRK L ++L  KAF       T+  T  P   S+    GR+ SPL+ W  +E +YPRYP I+ +R++ E+R+  ID
Sbjct:  740 PVLEPDMPPAARKN-MIAAEIMSASPKTFRRVERVSTIYDSLASTEHDCFPVLNAEDGNVLVGTVLRKALCVILQHKAF-------THPDTFSPLSESSHREKGRLFSPLLDWPTLEKIYPRYPNIQDIRITVEDRQCVID 872          
BLAST of mRNA_H-paniculata_contig14929.2933.1 vs. uniprot
Match: A0A7S2CPI8_9STRA (Chloride channel protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CPI8_9STRA)

HSP 1 Score: 105 bits (263), Expect = 7.090e-24
Identity = 60/152 (39.47%), Postives = 88/152 (57.89%), Query Frame = 0
Query:    1 LPFLEDEVPSVASRNDMTASQAMSRRVRCLRPLERAGAVLDTLSSCEHDCFPVVDDQGGDILVGTILRKCLMILLHEKAFGPEDSLG---------TNAATGRPQVVS-AVAASGRISPL-VSWEAMESVYPRYPTIESVRLSEEERRGWID 141
            +PFLE ++P  A   ++TA   MS     ++P+ R GA+   LSSC+HDCFPVVD Q GDILVGTILR+ + +LL  +A+ PED++           N A  +P   +      G+ S   V W+ +  +YPR+P I  VR++ +ER   +D
Sbjct:  301 IPFLEGDLPIDALDAELTAGHVMSSGCVTMQPMMRVGALQSILSSCDHDCFPVVDPQRGDILVGTILRRTICVLLKHQAWFPEDAMHCDDDLDMSKANLAKKQPSAWAWRSQKQGKSSAFPVGWDEIGQLYPRFPEIWQVRITPQERELVVD 452          
BLAST of mRNA_H-paniculata_contig14929.2933.1 vs. uniprot
Match: A0A7S2B9U1_9STRA (Chloride channel protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B9U1_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.940e-22
Identity = 53/143 (37.06%), Postives = 83/143 (58.04%), Query Frame = 0
Query:    1 LPFLEDEVPSVASRNDMTASQAMSRRVRCLRPLERAGAVLDTLSSCEHDCFPVVDDQGGDILVGTILRKCLMILLHEKAF--GPEDSLGTNAATGRPQVVSAVAASGRISPLVSWEAMESVYPRYPTIESVRLSEEERRGWID 141
            +P LE E+ +  +   +T  + MS+ V CLRP E+   +++ L  C+ +CFPVVD  G  +L GT+LRK L  LLH++A+  GP   + + +   R    S    S    P++++E +ESVYP YP+I  + +S EE   W+D
Sbjct:  194 MPMLEPELEAELAPYHLTVEKIMSKDVECLRPFEKVRILMELLRDCDFECFPVVDPSG--LLCGTMLRKHLTTLLHQRAYVPGPTPKIDSESFIKRDDESSGPPIS---PPIITYEILESVYPNYPSIHDINISGEELDYWLD 331          
BLAST of mRNA_H-paniculata_contig14929.2933.1 vs. uniprot
Match: A0A7S2YH57_9STRA (Chloride channel protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YH57_9STRA)

HSP 1 Score: 100 bits (249), Expect = 5.520e-22
Identity = 56/152 (36.84%), Postives = 84/152 (55.26%), Query Frame = 0
Query:    3 FLEDEVPSVASRNDMTASQAMSRRVRCLRPLERAGAVLDTLSSCEHDCFPVVDDQGGDILVGTILRKCLMILLHEKAFGPEDSLGTNAAT------GRPQVVSAVAASGRIS-------PLVSWEAMESVYPRYPTIESVRLSEEERRGWID 141
            F+E E+ SV   +D+TA Q MS +V   RP+E+   ++DTL SC H  FPVVD + G +L GTI R  L +LL ++AFG  +  G N  +      G  +  SA+  +  +        PLV W  +E+ YP++P +E VR  + +R   +D
Sbjct:  319 FMESELKSVPRHHDLTARQIMSDQVVFFRPVEKVSNIIDTLHSCNHSFFPVVDPEDGGVLSGTIGRNELCVLLQQRAFGHPNEDGENGNSHHYKSGGLARQSSAMIYNNYMEYQGKHFFPLVEWNVLENAYPKFPKVEDVRFHDGDRDCLMD 470          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14929.2933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDY9_ECTSI1.240e-6265.38Channel voltage activated chloride channel (Partia... [more]
A0A836CAG3_9STRA1.390e-3343.97Chloride channel protein n=1 Tax=Tribonema minus T... [more]
A0A7R9ZRT7_9STRA8.020e-3142.55Chloride channel protein n=1 Tax=Craspedostauros a... [more]
A0A7S2XUS9_9STRA8.670e-3142.55Chloride channel protein n=1 Tax=Fibrocapsa japoni... [more]
B8LCA7_THAPS3.930e-2843.45Chloride channel protein (Fragment) n=2 Tax=Thalas... [more]
K0RAV9_THAOC4.150e-2640.46Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A4D9D9F8_9STRA8.460e-2641.13Chloride channel protein n=2 Tax=Monodopsidaceae T... [more]
A0A7S2CPI8_9STRA7.090e-2439.47Chloride channel protein n=2 Tax=Dictyocha speculu... [more]
A0A7S2B9U1_9STRA1.940e-2237.06Chloride channel protein n=1 Tax=Dictyocha speculu... [more]
A0A7S2YH57_9STRA5.520e-2236.84Chloride channel protein n=1 Tax=Amphiprora paludo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.580.10coord: 10..132
e-value: 5.2E-8
score: 34.9
NoneNo IPR availablePANTHERPTHR11689CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBERcoord: 1..140
NoneNo IPR availableSUPERFAMILY54631CBS-domain paircoord: 14..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14929contigH-paniculata_contig14929:3243..3885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14929.2933.1mRNA_H-paniculata_contig14929.2933.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14929 3243..3885 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14929.2933.1 ID=prot_H-paniculata_contig14929.2933.1|Name=mRNA_H-paniculata_contig14929.2933.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=141bp
LPFLEDEVPSVASRNDMTASQAMSRRVRCLRPLERAGAVLDTLSSCEHDC
FPVVDDQGGDILVGTILRKCLMILLHEKAFGPEDSLGTNAATGRPQVVSA
VAASGRISPLVSWEAMESVYPRYPTIESVRLSEEERRGWID
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