prot_H-paniculata_contig1491.2925.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1491.2925.1
Unique Nameprot_H-paniculata_contig1491.2925.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length278
Homology
BLAST of mRNA_H-paniculata_contig1491.2925.1 vs. uniprot
Match: D7FL71_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL71_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 9.770e-107
Identity = 182/276 (65.94%), Postives = 212/276 (76.81%), Query Frame = 0
Query:    1 MSQMPMIFYVSLWHSLSNASAGAALRWSSLAVVTAVQALEPLASAAVDFFLAGERSHYMVNACLVPVIGGVILVAGDPSLTWGGLFFAVASSVAVGVRDLYSKRASRQKEFNKRPLSAANTYAVVTVMSFATVVPYACIVDGPRAIQWWGQAQEDM------LAMAANEGHIVGVNVDVELDVGAVSGSSTLALYLAASGVLLFLHSAAAFLVLEKMGSVTAFSVSNAVKRGFIVSAAAAVMGPPLAHRSVVGAASAVVGTSAYWVARMYFPPRRR 270
            MSQMP++FYVSLWHS+SN + G AL+ SSLA+VTA+QALEPLASA VD F+AG+RSH +VNA +VP+I GV LV+ D S+T GGLFFAVASSV VGVRD YSKRASRQ+EF+KRPLSAANTYAVVTVMSFATVVPYA IVDGP A++WW  A   +      +A A  EG  VG       D    +  + LALYL  SGVLLFLHSAAAF VLEKMGSVT FSV+N+VKRG ++   A  MG P+   S  GAA AV+GT+AYWVAR+YFPPRRR
Sbjct:  124 MSQMPILFYVSLWHSVSNLATGWALQSSSLAMVTAIQALEPLASALVDLFVAGKRSHPIVNAAMVPIITGVALVSRDASITRGGLFFAVASSVCVGVRDFYSKRASRQREFHKRPLSAANTYAVVTVMSFATVVPYALIVDGPHALRWWATAGGGVAGGARAVASAVREG--VGAGDAGGDDDDVATSLAWLALYLGFSGVLLFLHSAAAFKVLEKMGSVTTFSVANSVKRGMVIFFGAVAMGTPIGFVSGFGAAVAVLGTAAYWVARLYFPPRRR 397          
BLAST of mRNA_H-paniculata_contig1491.2925.1 vs. uniprot
Match: L1IFW8_GUITC (TPT domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IFW8_GUITC)

HSP 1 Score: 102 bits (254), Expect = 2.740e-21
Identity = 79/263 (30.04%), Postives = 134/263 (50.95%), Query Frame = 0
Query:   10 VSLWHSLSNASAGAALRWSSLAVVTAVQALEPLASAAVDFFLAGERSHYMVNACLVPVIGGVILV-AGDPSLTWGGLFFAVASSVAVGVRDLYSKRASRQKEFNKRPLSAANTYAVVTVMSFATVVPYACIVDGPRAIQWWGQAQEDMLAMAANEGHIVGVNVDVELDVGAVSGSSTLALYLAASGVLLFLHSAAAFLVLEKMGSVTAFSVSNAVKRGFIVSAAAAVMGPPLAHRSVVGAASAVVGTSAYWVARMYFPPRRRR 271
            V+++H     +   A+   S++ V  V+ALEP+ +A +   + G    + V   ++PV+GGV L  A + S TWG    A+ S+V    R + SK +       +  ++A NTYAVVT+++F  ++P+A  ++G +            LAMA +                AVS    LA  + A+G+L + ++  AFLVL  +  VT  SV N VKR  ++ AAA V   P+    ++G+++A++G   Y V +  FP + ++
Sbjct:  174 VAVFHGFGQLATVTAMGLGSVSFVNVVKALEPICTALIGLIVTGRNLPWQVWLSMLPVVGGVGLASASELSFTWGCFLAAMFSNVVYATRGVLSKESMEMSNPGEN-MTAENTYAVVTLIAFVLMLPFALFLEGSKVASG--------LAMALD----------------AVSPLK-LAQMVVATGLLYYTYNEMAFLVLGSVAPVTQ-SVGNTVKRVVVIVAAAIVFQTPMTPLGIIGSSTAILGVLLYSVIKGRFPDKPKK 409          
BLAST of mRNA_H-paniculata_contig1491.2925.1 vs. uniprot
Match: A0A2P2PJ03_RHIMU (TPT domain-containing protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2PJ03_RHIMU)

HSP 1 Score: 79.0 bits (193), Expect = 5.060e-13
Identity = 74/266 (27.82%), Postives = 127/266 (47.74%), Query Frame = 0
Query:    2 SQMPMIFYVSLWHSLSNASAGAALRWSSLAVVTAVQALEPLASAAVDFFLAGERSHYMVNACLVPVIGGVILVA-GDPSLTWGGLFFAVASSVAVGVRDLYSKRASRQKEFNKRPLSAANTYAVVTVMSFATVVPYACIVDGPRAIQWWGQAQEDMLAMAANEGHIVGVNVDVELDVGAVSGSSTLALYLAASGVLLFLHSAAAFLVLEKMGSVTAFSVSNAVKRGFIVSAAAAVMGPPLAHRSVVGAASAVVGTSAYWVARMYFP 266
            SQ   I  +++ H+L N     +L   +++    ++A+EP  +        GER  + V A LVPV+GGV L +  + S  W G   A+AS+V    R++ SK+    KE     L   N ++V+T++SFA +VP A  ++G +    + Q+       AAN+G          L+V  +   S LA      G     +   ++++L+ + +VT  SV N VKR  ++ ++      P++  + +G A A+ G   Y  A+   P
Sbjct:  171 SQFSAILPLAVAHTLGNLLTNVSLGKVAVSFTHTIKAMEPFFTVLFAALFLGERPSFWVVASLVPVVGGVALASFTEASFNWIGFCSAMASNVTNQSRNVLSKKFMVNKE---EALDNINLFSVITIISFALLVPAAIFLEGFKFTPSYLQS-------AANQG----------LNVKKLCIRSLLA------GFCFHSYQQVSYMILQMVNAVT-HSVGNCVKRVVVIFSSVIFFQTPVSPINSLGTAVALAGVFLYSRAKQIKP 409          
BLAST of mRNA_H-paniculata_contig1491.2925.1 vs. uniprot
Match: A0A7S4NC57_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NC57_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.950e-12
Identity = 65/235 (27.66%), Postives = 115/235 (48.94%), Query Frame = 0
Query:   36 VQALEPLASAAVDFFLAGERSHYMVNACLVPVIGGVILVA-GDPSLTWGGLFFAVASSVAVGVRDLYSKRASRQKEFNKRPLSAANTYAVVTVMSFATVVPYACIVDGPRAIQWWGQAQEDMLAMAANEGHIVGVNVDVELDVGAVSGSSTLALYLAASGVLLFLHSAAAFLVLEKMGSVTAFSVSNAVKRGFIVSAAAAVMGPPLAHRSVVGAASAVVGTSAYWVARMYFPPRR 269
            V+A EP  SAA+            V   L+PV+GGV L +  + + +W    +A+ S+VA   R L  K+ +  K+  K  ++A NTYA++T++S A ++P A  ++GP+ +  +G  Q                         A   S  +A  L A+ +  F ++  AF+ L+ +  V+  ++ N +KR FI+ A+  V G  +  + +VG+  AV G   Y +A+  + P++
Sbjct:   40 VKASEPAVSAALSALATKTFLPLPVYLTLIPVMGGVALSSVSELTFSWKSFNYAMMSNVASASRGLVGKQ-TLNKKLGKN-MNAMNTYAILTLLSSAMLLPVALFLEGPQILNAFGDLQR------------------------AGKFSEYIAQTLMAA-LFYFTYNECAFVCLDNVSPVS-HALGNTLKRVFIIVASIIVFGNKMTTQGIVGSVMAVAGVLLYSLAKTKYMPKK 246          
BLAST of mRNA_H-paniculata_contig1491.2925.1 vs. uniprot
Match: A0A7S4JYS4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JYS4_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.830e-12
Identity = 68/261 (26.05%), Postives = 126/261 (48.28%), Query Frame = 0
Query:   10 VSLWHSLSNASAGAALRWSSLAVVTAVQALEPLASAAVDFFLAGERSHYMVNACLVPVIGGVILVA-GDPSLTWGGLFFAVASSVAVGVRDLYSKRASRQKEFNKRPLSAANTYAVVTVMSFATVVPYACIVDGPRAIQWWGQAQEDMLAMAANEGHIVGVNVDVELDVGAVSGSSTLALYLAASGVLLFLHSAAAFLVLEKMGSVTAFSVSNAVKRGFIVSAAAAVMGPPLAHRSVVGAASAVVGTSAYWVARMYFPPRR 269
            V++ H L +     ++   +++    V+A EP  SAA+            V   L+PV+GGV L +  + + +W    +A+ S+VA   R L  K+ +  K+  K  ++A NTYA++T++S A ++P A  ++GP+ +  +G  Q                         A   S  +A  L A+ +  F ++  AF+ L+ +  V+  ++ N +KR FI+ A+  V G  +  + +VG+  AV G   Y +A+  + P++
Sbjct:  157 VAMLHCLVHVGGVISMGAGAVSFTYIVKASEPAVSAALSALATKTFLPLPVYLTLIPVMGGVALSSVSELTFSWKSFNYAMMSNVASASRGLVGKQ-TLNKKLGKN-MNAMNTYAILTLLSSAMLLPVALFLEGPQILNAFGDLQR------------------------AGKFSEYIAQTLMAA-LFYFTYNECAFVCLDNVSPVS-HALGNTLKRVFIIVASIIVFGNKMTTQGIVGSVMAVAGVLLYSLAKTKYMPKK 389          
BLAST of mRNA_H-paniculata_contig1491.2925.1 vs. uniprot
Match: A0A7S3ZMF2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMF2_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 4.450e-11
Identity = 68/256 (26.56%), Postives = 118/256 (46.09%), Query Frame = 0
Query:   14 HSLSNASAGAALRWSSLAVVTAVQALEPLASAAVDFFLAGERSHYMVNACLVPVIGGVILVAGDPSLTWG-------GLFFAVASSVAVGVRDLYSKRASRQKEFNKRPLSAANTYAVVTVMSFATVVPYACIVDGPRAIQWWGQAQEDMLAMAANEGHIVGVNVDVELDVGAVSGSSTLALYLAASGVLLFLHSAAAFLVLEKMGSVTAFSVSNAVKRGFIVSAAAAVMGPPLAHRSVVGAASAVVGTSAYWVAR 262
            H L  +S GA     S+     ++A EP+    V     G+ + + VNACL P++GGV+     P   +G           A+AS+VA  +  L +K    ++   K  L+ AN YAV+TV S   ++  + + +GP A+     A + M   AA    +VG                         G L + ++   F VL+ +  V+A +V+N++KR  ++ AA   +G  ++ R ++G++ A+ G   Y +A+
Sbjct:  149 HGLQVSSMGA----GSVFFTHVIKATEPVVGMLVLLAFTGKIAPWWVNACLAPIVGGVVYAGIKPGTAFGMGDLLGYASVAALASTVAFSIAKLLAKSLMTKETKKKHNLTPANNYAVLTVCSTLVLLLPSALGEGPAALA----AIKAMPNPAAFMRQLVGC------------------------GFLYYGYNEMGFRVLDLLSPVSA-AVANSLKRVAVLLAAVIFLGEKVSSRKIIGSSVAMAGVLLYSLAK 371          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1491.2925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FL71_ECTSI9.770e-10765.94TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
L1IFW8_GUITC2.740e-2130.04TPT domain-containing protein (Fragment) n=1 Tax=G... [more]
A0A2P2PJ03_RHIMU5.060e-1327.82TPT domain-containing protein n=1 Tax=Rhizophora m... [more]
A0A7S4NC57_9STRA1.950e-1227.66Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4JYS4_9STRA3.830e-1226.05Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3ZMF2_9STRA4.450e-1126.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004853Sugar phosphate transporter domainPFAMPF03151TPTcoord: 3..258
e-value: 8.1E-30
score: 104.2
NoneNo IPR availablePANTHERPTHR11132:SF351XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTICcoord: 8..259
NoneNo IPR availablePANTHERPTHR11132SOLUTE CARRIER FAMILY 35coord: 8..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..208
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 140..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 236..240
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 241..261
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..101
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 262..277
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..30
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 6..77
NoneNo IPR availableTMHMMTMhelixcoord: 58..75
NoneNo IPR availableTMHMMTMhelixcoord: 80..97
NoneNo IPR availableTMHMMTMhelixcoord: 240..262
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 214..236
NoneNo IPR availableTMHMMTMhelixcoord: 185..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1491contigH-paniculata_contig1491:3078..13154 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1491.2925.1mRNA_H-paniculata_contig1491.2925.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1491 640..15026 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1491.2925.1 ID=prot_H-paniculata_contig1491.2925.1|Name=mRNA_H-paniculata_contig1491.2925.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=278bp
MSQMPMIFYVSLWHSLSNASAGAALRWSSLAVVTAVQALEPLASAAVDFF
LAGERSHYMVNACLVPVIGGVILVAGDPSLTWGGLFFAVASSVAVGVRDL
YSKRASRQKEFNKRPLSAANTYAVVTVMSFATVVPYACIVDGPRAIQWWG
QAQEDMLAMAANEGHIVGVNVDVELDVGAVSGSSTLALYLAASGVLLFLH
SAAAFLVLEKMGSVTAFSVSNAVKRGFIVSAAAAVMGPPLAHRSVVGAAS
AVVGTSAYWVARMYFPPRRRRKPGLQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004853Sugar_P_trans_dom