prot_H-paniculata_contig14902.2923.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14902.2923.1
Unique Nameprot_H-paniculata_contig14902.2923.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length637
Homology
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BLAST of mRNA_H-paniculata_contig14902.2923.1 vs. uniprot
Match: A0A6H5JML9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML9_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.290e-33
Identity = 131/346 (37.86%), Postives = 155/346 (44.80%), Query Frame = 0 
Query:    2 GFEGRLIDVIAKLAPTAAPDASQLLADAASSLPQSSRPVEAVGKKSKASDAXXXXXXXXXXXXXDRVRAAREKGAGGKXXXXXGLADGHADRMLCDFVKDLTASFLTDSYGVPSFVRVLRVFLRTAFPATARSIVWKELGAVGLLSLLDPAPA----PAPPARAAGRRSAPNDQDGEASDDVNVTMSSIAREDSSRDAMATTLTEGRGQRGENEVKVEGCSGGGDGQLPWADADAYLYPPDVDKSIIDAYLDALEHPRFGPPSA--------------GGR---GXXXXXXXXXXXXXHKQQELGM--------------------VSMRSVAVHHIACYLFPPPP 306
            GFEGRL +VIA+LA  +APD ++++ADAA++                    XXXXXXXXXXX  DR RAAR +               HA+R L +FVKDL ASFL DS+G+PSF RVLRVF+RT FP  AR +VWKELG VGLL LLDP PA    PAP A      S P                                                 +GGG          AYLYPPDVD  I++ YL ALEHPRFGP +               G R   G                   G+                    V+MR +AVHH+ACYLFPP P
Sbjct:  994 GFEGRLAEVIARLALASAPDPAKMIADAATAXXX--------XXXXXXXXXXXXXXXXXXXXARDRARAARRQS--------------HAERALLEFVKDLVASFLADSFGLPSFARVLRVFVRTGFPVAARRVVWKELGDVGLLHLLDPPPAGATAPAPAAAVPSHDSVP--------------------------------------------AAHAINGGG-----CVTDQAYLYPPDVDGDIVEVYLTALEHPRFGPAAXXXXXXXXXXXXXXXGERRRHGRVEETERGSALSARAAAATGLAVEAGRDDLSPSAAAAGGWAVTMREIAVHHLACYLFPPSP 1268
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BLAST of mRNA_H-paniculata_contig14902.2923.1 vs. uniprot
Match: A0A835YNX8_9STRA (RPAP1_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNX8_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.030e-5
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0 
Query:   87 ADGHADRMLCDFVKDLTASFLTDSYGVPSFVRVLRVFLRTAFPATARSIVWKELGAVGLLSLLDPAP 153
            AD      L  FV DL  +F+ DS G   F R L + LR   P  AR+++W+ELGA+GLL LL P P
Sbjct: 1082 ADAQQHPGLTAFVSDLLGAFVEDSCGDAGFARALLLLLRPRMPPLARALIWRELGALGLLPLLAPPP 1148
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14902.2923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JML9_9PHAE1.290e-3337.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YNX8_9STRA1.030e-546.27RPAP1_C domain-containing protein n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14902contigH-paniculata_contig14902:3191..6337 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14902.2923.1mRNA_H-paniculata_contig14902.2923.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14902 2123..6358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14902.2923.1 ID=prot_H-paniculata_contig14902.2923.1|Name=mRNA_H-paniculata_contig14902.2923.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=637bp
MGFEGRLIDVIAKLAPTAAPDASQLLADAASSLPQSSRPVEAVGKKSKAS
DAAAATAAATAATARDRVRAAREKGAGGKGGGEGGLADGHADRMLCDFVK
DLTASFLTDSYGVPSFVRVLRVFLRTAFPATARSIVWKELGAVGLLSLLD
PAPAPAPPARAAGRRSAPNDQDGEASDDVNVTMSSIAREDSSRDAMATTL
TEGRGQRGENEVKVEGCSGGGDGQLPWADADAYLYPPDVDKSIIDAYLDA
LEHPRFGPPSAGGRGGGNGGEDGRQQEQHKQQELGMVSMRSVAVHHIACY
LFPPPPPPPSPPSSPSPSPSPSPSPSPSPSPSPPPSCSPSSSWADPLLLQ
QQQRAEPTVLEVSNDKNAAKITGAGDEESSQVVYEKVAGSAPTVNEGPGM
HGVVTDNATPAAVVAAPFSSPQWRPDFGRRKRLERLLLMGSSSSSGRGQG
EGSARSMEHREGGLTDGSEERPRDRGCCSSVAAAAAAVGVAEAVLGYECD
AVVAGHHTAGIGVSCSHEEEKEQREGVDDEGVGMENGKCPSSSSPYSSFF
VHDLPSTSGSFLRRPKACSWASKLGPDRRRILQAYCVCRSSGGTGGSGSG
GVSGVRDSDVAAWLLGQGELEVTEVVRRLGASLKSS*
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