prot_H-paniculata_contig1489.2913.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1489.2913.1
Unique Nameprot_H-paniculata_contig1489.2913.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length142
Homology
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BLAST of mRNA_H-paniculata_contig1489.2913.1 vs. uniprot
Match: D7FSW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW1_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 2.620e-19
Identity = 57/136 (41.91%), Postives = 73/136 (53.68%), Query Frame = 0 
Query:    1 MADDELYGDLDTSRTALMLKTVEVELQQSEAARQSLEQRLTVTQKRVCHVLQFTTQCFTVRTTITVACVQTCSDTRRGNPWCPRMIDEKLLSEENEVLAKNISCLYNTARAEIARKDRWIERLRKELQEKEANARQ 136
            MA+++LYGDLDTS  AL +K +E EL  SE+ R+ LE+RL    ++                                         EK+L  ENE LAKNISCL+NTA+AEIARK+ WIERLR+ELQ  E   +Q
Sbjct:    1 MAEEDLYGDLDTSVDALKIKGLEAELSTSESLRRGLEERLASALRK-----------------------------------------EKVLRAENEQLAKNISCLFNTAKAEIARKETWIERLRQELQVAEGKLKQ 95
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1489.2913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSW1_ECTSI2.620e-1941.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..46
NoneNo IPR availableCOILSCoilCoilcoord: 113..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1489contigH-paniculata_contig1489:7643..10234 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1489.2913.1mRNA_H-paniculata_contig1489.2913.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1489 7571..10509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1489.2913.1 ID=prot_H-paniculata_contig1489.2913.1|Name=mRNA_H-paniculata_contig1489.2913.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp
MADDELYGDLDTSRTALMLKTVEVELQQSEAARQSLEQRLTVTQKRVCHV
LQFTTQCFTVRTTITVACVQTCSDTRRGNPWCPRMIDEKLLSEENEVLAK
NISCLYNTARAEIARKDRWIERLRKELQEKEANARQSSSRR*
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