prot_H-paniculata_contig14887.2910.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14887.2910.1
Unique Nameprot_H-paniculata_contig14887.2910.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length71
Homology
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BLAST of mRNA_H-paniculata_contig14887.2910.1 vs. uniprot
Match: D7FT38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT38_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 3.670e-22
Identity = 48/69 (69.57%), Postives = 57/69 (82.61%), Query Frame = 0 
Query:    3 ENELLELNADLMEVIREKQEAGALDEAVALQVLLHKNLMRLRLFLCAPDQPIPDAPDDWQPPRAWPSTP 71
            ENELLE+NADLM +IREKQE GAL +A +LQ++LHKNLMRLR F+ APD+PIP+AP DW PP   P TP
Sbjct:    5 ENELLEINADLMVLIREKQEQGALADATSLQIVLHKNLMRLRQFMAAPDEPIPNAPKDWMPPMPTPDTP 73
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14887.2910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT38_ECTSI3.670e-2269.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007726SS18 familyPFAMPF05030SSXTcoord: 5..43
e-value: 1.9E-7
score: 30.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14887contigH-paniculata_contig14887:626..2905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14887.2910.1mRNA_H-paniculata_contig14887.2910.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14887 626..2905 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14887.2910.1 ID=prot_H-paniculata_contig14887.2910.1|Name=mRNA_H-paniculata_contig14887.2910.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp
MDENELLELNADLMEVIREKQEAGALDEAVALQVLLHKNLMRLRLFLCAP
DQPIPDAPDDWQPPRAWPSTP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007726SS18_fam