prot_H-paniculata_contig1488.2907.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1488.2907.1
Unique Nameprot_H-paniculata_contig1488.2907.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length430
Homology
BLAST of mRNA_H-paniculata_contig1488.2907.1 vs. uniprot
Match: A0A6H5KN83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN83_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 7.360e-67
Identity = 171/441 (38.78%), Postives = 220/441 (49.89%), Query Frame = 0
Query:    3 VDYSKWNKMADDMSDSDEADSSNQPQVTTFDEPQSITFGGTAASLEAQNREGAAAVVAAHIMDERMRTKLTTGMAPLLENGXXXXXXXXXXRNP-------ITDNELAENGAEVFEGNDHDRHVHDKIAAADCRPSTQKRLRYVWRQSRDQVTVVIPTPSGVRAGDVTVTLKAKPDTYAEGVADLIRVTVVNRTTRGKWKTSVPVAVGDSENNENEQVGVEGGNGMCSGRTARDQTAEMEMTTAGQENTESTADEVISEEELV-LLSGELPFQVAL----EEEVDWELKDFPGTRVASCNNWLGFS--GAAPTLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDFQTDSGASIGQMDASERPS---RGVQITLRKHCPIPNAVVWWRSFVKGEPEIDISSIKGRAKNNGYQSAWEEAMGMFKAKMADRKEKGKISVDI 426
            VDYSKW+KMA +MSDSD+ D+ N P+VTTFD+PQS+TFGGT+AS  A+  +GA+    AH       T  ++G+A   +              P       I+D  L ENGA V                 D     Q  L+YVWRQ+R +V VV+P P+G RAGDV V+L+AKP+T AEGVADLIRV V  + TRG                                   RD  A  E+ TA       T        +LV +L GEL FQ  L    E EV+WELKD+PGT VA  +        G+AP                                          + G  +AS   +   RGV+I L+KHCP+PNA VWW+S +KG PEID+++IKGRA NN +QS WEEA+GMFK ++A RK + KISVD+
Sbjct:    4 VDYSKWDKMASEMSDSDD-DNGNNPEVTTFDQPQSVTFGGTSASQAAEGWDGASDDSGAH----PDTTPSSSGVAAPADGSTGAVAAAATGTTPTPQVKPLISDERLTENGAAV---------------RGDANAGRQA-LQYVWRQTRAEVVVVVPVPAGTRAGDVEVSLRAKPETIAEGVADLIRVAV--KATRG-----------------------------------RDGAASRELGTAATAPGGGT--------KLVPVLEGELAFQAKLGAEDEGEVEWELKDYPGTAVARDDPDSSGDPVGSAPP--------------------------------------PAPAAGAREASSSSNGDRRGVEIVLKKHCPVPNAAVWWKSLLKGGPEIDVAAIKGRATNN-HQSVWEEALGMFKEQVAARKGQPKISVDM 339          
BLAST of mRNA_H-paniculata_contig1488.2907.1 vs. uniprot
Match: A0A836CJH1_9STRA (CS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH1_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.070e-6
Identity = 56/177 (31.64%), Postives = 71/177 (40.11%), Query Frame = 0
Query:    2 MVDYSKWNKMADDMSDSDEADSSNQPQVTTFDEPQSITFGGTAASLEAQ--------------NREGAAAVVAAHIMDERMRTKLTTGMAPLLENGXXXXXXXXXXRNPITDNELAENGAEVFEGNDHDRHVHDKIAAADCRPSTQKRLRYVWRQSRDQVTVVIPTPSGVRAGDVTV 164
            MVDYSKW+KMA DMSDS++ +  ++P VT FD P S+T+GG  A  E +                  +A    A   D+  R  LT   A LL                     L  NGA V +               DC   T     Y W QSR  V + +  P G RA +V V
Sbjct:    1 MVDYSKWDKMAADMSDSEDEEGGSKPVVTAFDNPTSVTWGGGDAPEEERLXXXXXXXXXXXXXXXXSSAGTPGA---DDSKRAALTDKPARLLT--------------------LTRNGAAVQD---------------DCGAYT-----YFWSQSRGDVAITVVAPPGTRASEVEV 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1488.2907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KN83_9PHAE7.360e-6738.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJH1_9STRA2.070e-631.64CS domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..291
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 292..313
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 314..429
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 132..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1488contigH-paniculata_contig1488:13469..18516 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1488.2907.1mRNA_H-paniculata_contig1488.2907.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1488 13057..18857 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1488.2907.1 ID=prot_H-paniculata_contig1488.2907.1|Name=mRNA_H-paniculata_contig1488.2907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=430bp
MMVDYSKWNKMADDMSDSDEADSSNQPQVTTFDEPQSITFGGTAASLEAQ
NREGAAAVVAAHIMDERMRTKLTTGMAPLLENGGSSSSSQQKRRNPITDN
ELAENGAEVFEGNDHDRHVHDKIAAADCRPSTQKRLRYVWRQSRDQVTVV
IPTPSGVRAGDVTVTLKAKPDTYAEGVADLIRVTVVNRTTRGKWKTSVPV
AVGDSENNENEQVGVEGGNGMCSGRTARDQTAEMEMTTAGQENTESTADE
VISEEELVLLSGELPFQVALEEEVDWELKDFPGTRVASCNNWLGFSGAAP
TLVVAAAAAAAALTTTKTGQKLETTTERKGGGGLDFQTDSGASIGQMDAS
ERPSRGVQITLRKHCPIPNAVVWWRSFVKGEPEIDISSIKGRAKNNGYQS
AWEEAMGMFKAKMADRKEKGKISVDIGDH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone