prot_H-paniculata_contig14874.2904.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14874.2904.1
Unique Nameprot_H-paniculata_contig14874.2904.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length247
Homology
BLAST of mRNA_H-paniculata_contig14874.2904.1 vs. uniprot
Match: A0A6H5JJ43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ43_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 7.420e-10
Identity = 82/239 (34.31%), Postives = 112/239 (46.86%), Query Frame = 0
Query:    8 ETGLDVLLRCLEVLSLSDVSCLGP--IPVSGKPTC----DSLAGGAGSQGKVQCVVAAEASLGKNEFDDAAIE--TSSGYRSEAA-------SRT--------VHHSVIRGLVAVLMPWEHSKRSQQAALLVLGNMIENDXXXXXXXXXXXXXXXXXDDAKEIAGSVVDVRGDGDETPAAWGSRGCVEALADALAAQSFVGT----EDGGDDAVDDVRLAGK-RKDFLNSVSEALDGED 218
            ETG D LLRCLEVL+ S+VS +GP   P + +P       +LA  +G     Q  +  +    +N  +++  E  T+ G   EAA       S+T        +   VIRGLV+ L PWEHS+ SQ+AALLVLGN++EN                     +E AG+V  V+       A   S  C   L   LAA +  GT    ED   D    VR  GK R++F+ SV   +  +D
Sbjct:  456 ETGFDALLRCLEVLTTSEVSGVGPPSSPAAAEPPVVVDPPALAQDSGELSPKQ-QLNEQPRKRRNLAEESTEEGPTNGGGDCEAACEVQPETSKTRPSLSRGEMRGRVIRGLVSALTPWEHSRHSQRAALLVLGNILENAI-------------------EEDAGAVGGVKS---PEGARRASESCAVELDRGLAALAAGGTGEWAEDDERDPAAAVRRVGKSRREFVESVHNLVHSDD 671          
BLAST of mRNA_H-paniculata_contig14874.2904.1 vs. uniprot
Match: D7FSE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSE1_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 2.900e-7
Identity = 75/238 (31.51%), Postives = 96/238 (40.34%), Query Frame = 0
Query:    8 ETGLDVLLRCLEVLSLSDVSCLGP-------------------IPVSGKPTCDSLAGGAGSQGKVQCVVAAEASLGKNEFDDAAIET---SSGYRSEAASRTVHHSVIRGLVAVLMPWEHSKRSQQAALLVLGNMIENDXXXXXXXXXXXXXXXXXDDAKEIAGSVVDVRGDGDETPAAWGSRGCVEALADALAAQSFVGT----EDGGDDAVDDVRLAGK-RKDFLNSVSEALDGED 218
            ETG D LLRCLEVL+ S VS +GP                                       K+     AE      E  +A  E    +S  R       +   VIRGLV+ L PWEHS+RSQ+AALLVLGN++EN                     +E AG+V  V+       A   S  C   L   LAA +  G     EDG  D    V   GK R++F+ SV + +  +D
Sbjct:  458 ETGFDALLRCLEVLTTSKVSGVGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLAEEGTAEGPTNGGENCEAVCEVQPETSKTRPSLGRGEMRGRVIRGLVSALTPWEHSRRSQKAALLVLGNILENAI-------------------EEDAGAVGGVKS---TEGARSASESCAVELDRGLAALAAGGAGEWAEDGERDPAAAVERVGKNRREFVESVQKLVHSDD 673          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14874.2904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJ43_9PHAE7.420e-1034.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSE1_ECTSI2.900e-731.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14874contigH-paniculata_contig14874:251..4652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14874.2904.1mRNA_H-paniculata_contig14874.2904.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14874 224..4999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14874.2904.1 ID=prot_H-paniculata_contig14874.2904.1|Name=mRNA_H-paniculata_contig14874.2904.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=247bp
MRLPPTAETGLDVLLRCLEVLSLSDVSCLGPIPVSGKPTCDSLAGGAGSQ
GKVQCVVAAEASLGKNEFDDAAIETSSGYRSEAASRTVHHSVIRGLVAVL
MPWEHSKRSQQAALLVLGNMIENDLENDLEKDLQSNPEHGPDDAKEIAGS
VVDVRGDGDETPAAWGSRGCVEALADALAAQSFVGTEDGGDDAVDDVRLA
GKRKDFLNSVSEALDGEDVKDEDLLLQLRDASALVEKTLQREALLR*
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