prot_H-paniculata_contig14862.2898.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14862.2898.1
Unique Nameprot_H-paniculata_contig14862.2898.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length346
Homology
BLAST of mRNA_H-paniculata_contig14862.2898.1 vs. uniprot
Match: D8LLH4_ECTSI (Protein ARV n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLH4_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 2.750e-70
Identity = 178/395 (45.06%), Postives = 199/395 (50.38%), Query Frame = 0
Query:   24 VCVECGMSVELLFRQYTRG-IRLGRCGYCCSVADKYIECEFVLIAIDLALHRIQAYRHLLFNRKPFSTHTFYGRLWQLGVAMAALDAHLRHTALSSDLSSLADASPKPRVGGGGIYNGDSSDPFWEAGGLLVAAVVEHVCCAAGAVLCARQLTFNAPCARSDATESRNHTNADMPTLQRGVGVSGDAKGDADI------------------SSPRVGG----------------------------QGDSTAARARGGEAGCGSAPS--------------------------TTRMYMAMVYPLFFRLLAAFVMIWDQQVAILNTIELLVATMQFVALSAVVGGPATMAAGMGGIEGARVTAATSVVAGLVAKMVGRGLLCRYLGTDARTLTML 345
            VCVECG  V LLFR+Y +G IRLGRC YC SVADKYIE EFVLIAIDLALHR+QAYRHLLFN +PFSTH+F GRLWQLGV MAALDAHLRHTALSS+                                      VEH C AAGAVL A      A                   T   G    G  + D D                   SS  VGG                            +  S+ +          + PS                            +MYMA+VYPLFFRLLAAFVMIWD+QVAILNTIELLVATMQFVALSAVVGGPA ++ GMG  EG    AA SV+AGL +KM  R +LC + G+D RTL ML
Sbjct:   37 VCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEAXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXVEHACFAAGAVLFATSRVRAAAXXXXXXXXXXXXQTGRRSTRSTGTINGGRQEEDWDEYGXXXXXXXXXXXXXEWRSSGDVGGTXXXXXXXXXXXXXXXXXXXXXXXXXXYESSSSYSLPPPRPDSSSTIPSXXXXXXXXXXXPLCXXXXXXXXXXXRAAKMYMAVVYPLFFRLLAAFVMIWDRQVAILNTIELLVATMQFVALSAVVGGPAAVS-GMG--EGG--VAAMSVLAGLASKMAARAVLCLWFGSDPRTLRML 423          
BLAST of mRNA_H-paniculata_contig14862.2898.1 vs. uniprot
Match: A0A7S1CNP5_9STRA (Protein ARV (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNP5_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.120e-20
Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0
Query:   24 VCVECGMSVELLFRQYTRG-IRLGRCGYCCSVADKYIECEFVLIAIDLALHRIQAYRHLLFNRKPFSTHTFYGRLWQLGVAMAALD 108
            +CV CG S+  +FR+Y++G IRL RC +C +VADKYIE E VLIAID+ LHRI  YRHLLFNR  +  H     +  + +A+  LD
Sbjct:   16 ICVVCGRSLSHVFREYSKGNIRLSRCDHCKNVADKYIEYELVLIAIDMVLHRISVYRHLLFNRLEYQEHGVPRPIVMIAIAILCLD 101          
BLAST of mRNA_H-paniculata_contig14862.2898.1 vs. uniprot
Match: A0A836DLE2_9ROSI (Protein ARV n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DLE2_9ROSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.390e-19
Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = 0
Query:   23 PVCVECGMSVELLFRQYTRG-IRLGRCGYCCSVADKYIECEFVLIAIDLALHRIQAYRHLLFNRKPFSTHTFYGRLWQLGVAMAALDAH 110
            P CVECG  ++ LF QY+ G IRL RC  C +VAD+YIECEF++I+IDL LH+ +AYRHLLFN     T  F G LW+   A   LDA+
Sbjct:   14 PRCVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIISIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 102          
BLAST of mRNA_H-paniculata_contig14862.2898.1 vs. uniprot
Match: A0A3N7FYG6_POPTR (Protein ARV n=7 Tax=Populus TaxID=3689 RepID=A0A3N7FYG6_POPTR)

HSP 1 Score: 94.7 bits (234), Expect = 2.020e-19
Identity = 49/89 (55.06%), Postives = 60/89 (67.42%), Query Frame = 0
Query:   23 PVCVECGMSVELLFRQYTRG-IRLGRCGYCCSVADKYIECEFVLIAIDLALHRIQAYRHLLFNRKPFSTHTFYGRLWQLGVAMAALDAH 110
            P CVECG  ++ LF QY+ G IRL RC  C +VAD+YIECEF++I IDL LH+ +AYRHLLFN     T  F G LW+   A   LDA+
Sbjct:    3 PRCVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 91          
BLAST of mRNA_H-paniculata_contig14862.2898.1 vs. uniprot
Match: A0A3N7G147_POPTR (Protein ARV n=9 Tax=Populus TaxID=3689 RepID=A0A3N7G147_POPTR)

HSP 1 Score: 94.7 bits (234), Expect = 4.280e-19
Identity = 49/89 (55.06%), Postives = 60/89 (67.42%), Query Frame = 0
Query:   23 PVCVECGMSVELLFRQYTRG-IRLGRCGYCCSVADKYIECEFVLIAIDLALHRIQAYRHLLFNRKPFSTHTFYGRLWQLGVAMAALDAH 110
            P CVECG  ++ LF QY+ G IRL RC  C +VAD+YIECEF++I IDL LH+ +AYRHLLFN     T  F G LW+   A   LDA+
Sbjct:    3 PRCVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 91          
BLAST of mRNA_H-paniculata_contig14862.2898.1 vs. uniprot
Match: A0A2P2MPP1_RHIMU (Protein ARV n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MPP1_RHIMU)

HSP 1 Score: 91.3 bits (225), Expect = 1.210e-18
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 0
Query:   25 CVECGMSVELLFRQYTRG-IRLGRCGYCCSVADKYIECEFVLIAIDLALHRIQAYRHLLFNRKPFSTHTFYGRLWQLGVAMAALDAH 110
            CV+CG  ++ LF QY+ G IRL +C  C +VAD+YIECEF++I IDL LH+ QAYRHLL+N     T  F G LW+  +    LDA+
Sbjct:    6 CVKCGFRIKTLFVQYSPGNIRLMKCENCKAVADEYIECEFMIILIDLILHKPQAYRHLLYNVLFQETVNFQGLLWKSTIGFLVLDAY 92          
BLAST of mRNA_H-paniculata_contig14862.2898.1 vs. uniprot
Match: A0A0V0GNM9_SOLCH (Protein ARV n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0GNM9_SOLCH)

HSP 1 Score: 89.7 bits (221), Expect = 1.420e-18
Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 0
Query:   25 CVECGMSVELLFRQYTRG-IRLGRCGYCCSVADKYIECEFVLIAIDLALHRIQAYRHLLFNRKPFSTHTFYGR--LWQLGVAMAALDA 109
            CV+CG SV  L+ QY+ G IRL +CG C +VAD+YIECE +++ IDL LH+I+AYRHL +NR  F   T +    LW+L +    LDA
Sbjct:   17 CVQCGFSVTTLYIQYSPGNIRLMKCGNCKAVADEYIECELMILVIDLILHKIKAYRHLFYNR--FERETLHNEVLLWKLSLGFLILDA 102          
BLAST of mRNA_H-paniculata_contig14862.2898.1 vs. uniprot
Match: A0A1U7XNT9_NICSY (Protein ARV n=3 Tax=Nicotiana TaxID=4085 RepID=A0A1U7XNT9_NICSY)

HSP 1 Score: 91.7 bits (226), Expect = 1.490e-18
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 0
Query:   25 CVECGMSVELLFRQYTRG-IRLGRCGYCCSVADKYIECEFVLIAIDLALHRIQAYRHLLFNRKPFSTHTFY--GRLWQLGVAMAALDAH 110
            CV+CG SV  L+ QY+ G IRL +CG C ++AD+YIECE +++ IDL LH+I+AYRHL +NR  FS  T +  G LW+  +    LDA+
Sbjct:   17 CVQCGFSVTTLYIQYSPGNIRLMKCGNCKAIADEYIECELMILVIDLILHKIRAYRHLFYNR--FSRETLHNEGLLWKFSLGFLILDAY 103          
BLAST of mRNA_H-paniculata_contig14862.2898.1 vs. uniprot
Match: UPI001FB0A667 (protein ARV 1 isoform X2 n=1 Tax=Capsicum annuum TaxID=4072 RepID=UPI001FB0A667)

HSP 1 Score: 92.0 bits (227), Expect = 2.380e-18
Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = 0
Query:   25 CVECGMSVELLFRQYTRG-IRLGRCGYCCSVADKYIECEFVLIAIDLALHRIQAYRHLLFNRKPFSTHTFYGR--LWQLGVAMAALDAH 110
            CV+CG SV  L+ QY+ G IRL +CG C +VAD+YIECE +++ IDL LH+I+AYRHL +NR  FS  T +    LW+L +    LDA+
Sbjct:   17 CVQCGFSVTTLYIQYSPGNIRLMKCGNCKAVADEYIECELMILVIDLILHKIKAYRHLFYNR--FSRETLHNEVLLWKLSMGFLILDAY 103          
BLAST of mRNA_H-paniculata_contig14862.2898.1 vs. uniprot
Match: A0A1S4CRM8_TOBAC (Protein ARV n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CRM8_TOBAC)

HSP 1 Score: 91.7 bits (226), Expect = 4.010e-18
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 0
Query:   25 CVECGMSVELLFRQYTRG-IRLGRCGYCCSVADKYIECEFVLIAIDLALHRIQAYRHLLFNRKPFSTHTFY--GRLWQLGVAMAALDAH 110
            CV+CG SV  L+ QY+ G IRL +CG C ++AD+YIECE +++ IDL LH+I+AYRHL +NR  FS  T +  G LW+  +    LDA+
Sbjct:   17 CVQCGFSVTTLYIQYSPGNIRLMKCGNCKAIADEYIECELMILVIDLILHKIRAYRHLFYNR--FSRETLHNEGLLWKFSLGFLILDAY 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14862.2898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLH4_ECTSI2.750e-7045.06Protein ARV n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A7S1CNP5_9STRA5.120e-2052.33Protein ARV (Fragment) n=1 Tax=Bicosoecida sp. CB-... [more]
A0A836DLE2_9ROSI1.390e-1955.06Protein ARV n=1 Tax=Salix suchowensis TaxID=127890... [more]
A0A3N7FYG6_POPTR2.020e-1955.06Protein ARV n=7 Tax=Populus TaxID=3689 RepID=A0A3N... [more]
A0A3N7G147_POPTR4.280e-1955.06Protein ARV n=9 Tax=Populus TaxID=3689 RepID=A0A3N... [more]
A0A2P2MPP1_RHIMU1.210e-1851.72Protein ARV n=1 Tax=Rhizophora mucronata TaxID=611... [more]
A0A0V0GNM9_SOLCH1.420e-1851.14Protein ARV n=1 Tax=Solanum chacoense TaxID=4108 R... [more]
A0A1U7XNT9_NICSY1.490e-1850.56Protein ARV n=3 Tax=Nicotiana TaxID=4085 RepID=A0A... [more]
UPI001FB0A6672.380e-1851.69protein ARV 1 isoform X2 n=1 Tax=Capsicum annuum T... [more]
A0A1S4CRM8_TOBAC4.010e-1850.56Protein ARV n=5 Tax=Nicotiana TaxID=4085 RepID=A0A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007290Arv1 proteinPFAMPF04161Arv1coord: 24..289
e-value: 1.3E-29
score: 103.9
IPR007290Arv1 proteinPANTHERPTHR14467ARV1coord: 22..323
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 300..310
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 332..345
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 279..299
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 311..331
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 268..278
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..267
NoneNo IPR availableTMHMMTMhelixcoord: 248..267
NoneNo IPR availableTMHMMTMhelixcoord: 309..331
NoneNo IPR availableTMHMMTMhelixcoord: 272..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14862contigH-paniculata_contig14862:2195..5027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14862.2898.1mRNA_H-paniculata_contig14862.2898.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14862 1623..5134 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14862.2898.1 ID=prot_H-paniculata_contig14862.2898.1|Name=mRNA_H-paniculata_contig14862.2898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=346bp
MASGSANNARLLQKGTIVIAESPVCVECGMSVELLFRQYTRGIRLGRCGY
CCSVADKYIECEFVLIAIDLALHRIQAYRHLLFNRKPFSTHTFYGRLWQL
GVAMAALDAHLRHTALSSDLSSLADASPKPRVGGGGIYNGDSSDPFWEAG
GLLVAAVVEHVCCAAGAVLCARQLTFNAPCARSDATESRNHTNADMPTLQ
RGVGVSGDAKGDADISSPRVGGQGDSTAARARGGEAGCGSAPSTTRMYMA
MVYPLFFRLLAAFVMIWDQQVAILNTIELLVATMQFVALSAVVGGPATMA
AGMGGIEGARVTAATSVVAGLVAKMVGRGLLCRYLGTDARTLTML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007290Arv1