prot_H-paniculata_contig14850.2888.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14850.2888.1
Unique Nameprot_H-paniculata_contig14850.2888.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length195
Homology
BLAST of mRNA_H-paniculata_contig14850.2888.1 vs. uniprot
Match: A0A6H5K2J9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J9_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 9.520e-32
Identity = 69/179 (38.55%), Postives = 100/179 (55.87%), Query Frame = 0
Query:    2 LLATAGAKDGELRHFDAKQAFLKADVDEEVYIEIPERFQHFPGAMGKLNKAIYGLVQPGRCWNITFCD-MTAIGSEQSRADPSIFRKVVDRGVEIVVIVHVDDILARAKDCETMEWFAIELGGRFKLKDLGDAEFYMDCHATRNRKARELKLGQDMYVKSKAEKFDVEKTSRIPAMSGA 179
            +LA A  K   L H+D KQA+  A +DEEV++++P         + K  ++IYGL Q GR W     D +   G EQ +ADP +FRK+VD  V ++++++VDDIL    D E  E     L  +F  K LG+ +++  C      +A  L + Q  Y+ S  E+FDV+ TSRIPA  GA
Sbjct:    1 MLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERSIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSD-EDCEELLASLNKKFPTKILGECQWFNGCAMEIYIEAGTLAISQTAYIDSMVERFDVQSTSRIPATPGA 178          
BLAST of mRNA_H-paniculata_contig14850.2888.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.140e-31
Identity = 71/180 (39.44%), Postives = 106/180 (58.89%), Query Frame = 0
Query:    1 MLLATAGAKDGELRHFDAKQAFLKADVDEEVYIEIPERFQHFPGAMGKLNKAIYGLVQPGRCWNITFCD-MTAIGSEQSRADPSIFRKVVDRGVEIVVIVHVDDILARAKDCETMEWFAIELGGRFKLKDLGDAEFYMDCHATRNRKARELKLGQDMYVKSKAEKFDVEKTSRIPAMSGA 179
            ++LA A  K   L H+D KQA+  A +DEEV++++P         + K  +AIYGL Q GR W     D +   G EQ +ADP +FRK+VD+ V ++++++VDDIL    D E  E     L  +F  K+LG+ +++  C   R+ +A  L++ Q  Y+ S  E+FDV+ TSRIPA  GA
Sbjct: 1232 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSD-EDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA 1410          
BLAST of mRNA_H-paniculata_contig14850.2888.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.510e-31
Identity = 71/180 (39.44%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    1 MLLATAGAKDGELRHFDAKQAFLKADVDEEVYIEIPERFQHFPGAMGKLNKAIYGLVQPGRCWNITFCD-MTAIGSEQSRADPSIFRKVVDRGVEIVVIVHVDDILARAKDCETMEWFAIELGGRFKLKDLGDAEFYMDCHATRNRKARELKLGQDMYVKSKAEKFDVEKTSRIPAMSGA 179
            ++LA A  K   L H+D KQA+  A +DEEV++++P         + K  +AIYGL Q GR W     D +   G EQ +ADP +FRK+VD  V ++++++VDDIL    D E  E     L  +F  K+LG+ +++  C   R+ +A  L++ Q  Y+ S  E+FDV+ TSRIPA  GA
Sbjct:  833 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSD-EDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA 1011          
BLAST of mRNA_H-paniculata_contig14850.2888.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.550e-31
Identity = 71/180 (39.44%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    1 MLLATAGAKDGELRHFDAKQAFLKADVDEEVYIEIPERFQHFPGAMGKLNKAIYGLVQPGRCWNITFCD-MTAIGSEQSRADPSIFRKVVDRGVEIVVIVHVDDILARAKDCETMEWFAIELGGRFKLKDLGDAEFYMDCHATRNRKARELKLGQDMYVKSKAEKFDVEKTSRIPAMSGA 179
            ++LA A  K   L H+D KQA+  A +DEEV++++P         + K  +AIYGL Q GR W     D +   G EQ +ADP +FRK+VD  V ++++++VDDIL    D E  E     L  +F  K+LG+ +++  C   R+ +A  L++ Q  Y+ S  E+FDV+ TSRIPA  GA
Sbjct: 1212 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSD-EDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA 1390          
BLAST of mRNA_H-paniculata_contig14850.2888.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.560e-31
Identity = 71/180 (39.44%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    1 MLLATAGAKDGELRHFDAKQAFLKADVDEEVYIEIPERFQHFPGAMGKLNKAIYGLVQPGRCWNITFCD-MTAIGSEQSRADPSIFRKVVDRGVEIVVIVHVDDILARAKDCETMEWFAIELGGRFKLKDLGDAEFYMDCHATRNRKARELKLGQDMYVKSKAEKFDVEKTSRIPAMSGA 179
            ++LA A  K   L H+D KQA+  A +DEEV++++P         + K  +AIYGL Q GR W     D +   G EQ +ADP +FRK+VD  V ++++++VDDIL    D E  E     L  +F  K+LG+ +++  C   R+ +A  L++ Q  Y+ S  E+FDV+ TSRIPA  GA
Sbjct: 1375 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSD-EDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA 1553          
BLAST of mRNA_H-paniculata_contig14850.2888.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.560e-31
Identity = 72/190 (37.89%), Postives = 108/190 (56.84%), Query Frame = 0
Query:    1 MLLATAGAKDGELRHFDAKQAFLKADVDEEVYIEIPERFQHFPGAMGKLNKAIYGLVQPGRCWNITFCD-MTAIGSEQSRADPSIFRKVVDRGVEIVVIVHVDDILARAKDCETMEWFAIELGGRFKLKDLGDAEFYMDCHATRNRKARELKLGQDMYVKSKAEKFDVEKTSRIPAMSGAPALSKEDEPK 189
            ++LA A  K   L H+D KQA+  A +DEE+++ +P         +GK  +AIYGL Q GR W     D +   G EQ +ADP +FRK+VD  V ++++++VDD+L    D E  E     L  +F  K+LG+ E++  C   R+ +A  LK+ Q  Y+ +  ++FDV+ TSRIPA  G     K D+ K
Sbjct:  258 LMLAVANEKGMNLNHWDVKQAYTHATLDEEIFLRLPAGCGDKSHKIGKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDMLVAESD-EDCEELLASLKKKFPTKNLGECEWFHRCAIERDVEAGTLKISQTTYIDNMVKRFDVQSTSRIPASPGVDLGPKRDDEK 446          
BLAST of mRNA_H-paniculata_contig14850.2888.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 2.620e-31
Identity = 71/180 (39.44%), Postives = 104/180 (57.78%), Query Frame = 0
Query:    1 MLLATAGAKDGELRHFDAKQAFLKADVDEEVYIEIPERFQHFPGAMGKLNKAIYGLVQPGRCWNITFCD-MTAIGSEQSRADPSIFRKVVDRGVEIVVIVHVDDILARAKDCETMEWFAIELGGRFKLKDLGDAEFYMDCHATRNRKARELKLGQDMYVKSKAEKFDVEKTSRIPAMSGA 179
            ++LA A  K   L H+D KQA+  A +DEEV++++P         + K  +AIYGL Q GR W     D +   G EQ +ADP +FRK+VD  V ++++++VDDIL    D E  E     L  +F  K+LG+ +++  C   R+  A  L++ Q  Y+ S  E+FDV+ TSRIPA  GA
Sbjct:  424 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSD-EDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA 602          
BLAST of mRNA_H-paniculata_contig14850.2888.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.290e-30
Identity = 74/193 (38.34%), Postives = 105/193 (54.40%), Query Frame = 0
Query:    1 MLLATAGAKDGELRHFDAKQAFLKADVDEEVYIEIPERFQHFPGAMGKLNKAIYGLVQPGRCWNITFCD-MTAIGSEQSRADPSIFRKVVDRGVEIVVIVHVDDILARAKDCETMEWFAIELGGRFKLKDLGDAEFYMDCHATRNRKARELKLGQDMYVKSKAEKFDVEKTSRIPAMSGAPALSKEDEPKTPE 192
            ++L  A  K     H+D KQA+  A +DEEV++++P         + K  +AIYGL Q GR W     D +   G EQ +ADP +FRK+VD  V +++++HVDDIL    D E  E        RF  K+LG+ E++  C   R+  A  LK+ Q  Y+ S  ++FDV+ TSRIPA  G     K D+ K  E
Sbjct:  403 LMLPVANEKGMNHHHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIHVDDILVAGSD-EDCEELLASFNKRFPSKNLGECEWFDGCAIERDVDAGALKISQTAYIDSMVKRFDVQWTSRIPASPGVDLGPKRDDEKAGE 594          
BLAST of mRNA_H-paniculata_contig14850.2888.1 vs. uniprot
Match: A0A6H5JEW4_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW4_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.460e-30
Identity = 72/188 (38.30%), Postives = 108/188 (57.45%), Query Frame = 0
Query:    1 MLLATAGAKDGELRHFDAKQAFLKADVDEEVYIEIPERFQHFPGAMGKLNKAIYGLVQPGRCWNITFCD-MTAIGSEQSRADPSIFRKVVDRGVEIVVIVHVDDILARAKDCETMEWFAIELGGRFKLKDLGDAEFYMDCHATRNRKARELKLGQDMYVKSKAEKFDVEKTSRIPAMSGAPALSKEDE 187
            ++L  A  K   L H+D KQA+  A +DEEV++++P         + K  +AIYGL Q GR W     D +   G EQ +ADP +FRK+VD+ V ++++++VDDIL    D E  E     L  +   K+LG+ E++  C   R+ +A  LK+ Q  Y+ S  ++FDV+ TSRIPA   +P   +EDE
Sbjct:  937 LMLMVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSD-EDCEELLASLNKKIPTKNLGECEWFDGCAIERDEEAGTLKISQTAYIDSMVKRFDVQLTSRIPA---SPGPKREDE 1120          
BLAST of mRNA_H-paniculata_contig14850.2888.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.420e-29
Identity = 70/190 (36.84%), Postives = 106/190 (55.79%), Query Frame = 0
Query:    1 MLLATAGAKDGELRHFDAKQAFLKADVDEEVYIEIPERFQHFPGAMGKLNKAIYGLVQPGRCWNITFCD-MTAIGSEQSRADPSIFRKVVDRGVEIVVIVHVDDILARAKDCETMEWFAIELGGRFKLKDLGDAEFYMDCHATRNRKARELKLGQDMYVKSKAEKFDVEKTSRIPAMSGAPALSKEDEPK 189
            ++LA A  K   L H+D KQA+  A +DEEV++++P         + K  +AIYGL Q GR W     D +   G EQ +ADP +FRK+VD  V ++++++VDDIL    D E  E     L  +F  K+L + +++  C   R+ +   L++ Q  Y+ S  ++FDV+ TSRIPA  G     K D+ K
Sbjct:  387 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSD-EDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEK 575          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14850.2888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2J9_9PHAE9.520e-3238.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JN00_9PHAE1.140e-3139.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG8_9PHAE1.510e-3139.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE1.550e-3139.44Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE1.560e-3139.44Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JLS1_9PHAE1.560e-3137.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQN6_9PHAE2.620e-3139.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1V1_9PHAE2.290e-3038.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEW4_9PHAE2.460e-3038.30CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JC10_9PHAE1.420e-2936.84Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..170
e-value: 8.0E-26
score: 91.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14850contigH-paniculata_contig14850:5538..6122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14850.2888.1mRNA_H-paniculata_contig14850.2888.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14850 5481..6461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14850.2888.1 ID=prot_H-paniculata_contig14850.2888.1|Name=mRNA_H-paniculata_contig14850.2888.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MLLATAGAKDGELRHFDAKQAFLKADVDEEVYIEIPERFQHFPGAMGKLN
KAIYGLVQPGRCWNITFCDMTAIGSEQSRADPSIFRKVVDRGVEIVVIVH
VDDILARAKDCETMEWFAIELGGRFKLKDLGDAEFYMDCHATRNRKAREL
KLGQDMYVKSKAEKFDVEKTSRIPAMSGAPALSKEDEPKTPEEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2