prot_H-paniculata_contig14843.2883.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14843.2883.1
Unique Nameprot_H-paniculata_contig14843.2883.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length295
Homology
BLAST of mRNA_H-paniculata_contig14843.2883.1 vs. uniprot
Match: A0A6H5JIJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIJ2_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 9.380e-75
Identity = 135/179 (75.42%), Postives = 158/179 (88.27%), Query Frame = 0
Query:  117 STGGQAFGIALALMTACWGGVYILSAKAARSKVAVSHFAFVASIVPAVVCAVVLVAGFAGSKSGRVVLFGPAGLLGWTQTPGLALTQVLTSLLGDVIGNFGFYLLLKYISPLVVSLASLTVPLLAVVEGLMLGVVTPPGVLFGVGALLILVGAGTASVVTMLPHTEVFDATTAVKLANE 295
            S+GGQAFGI L L +AC+GG+YIL+AK+AR+KV VSHFAF+ASIVPA +C VVL+A + GS  GRV+LFG +GL GWTQ+P L L QV+TS+LGD++GNFGFYLLLKYISPLVVSLASLTVPLLAVVEGLMLGVV+PPG+LFG+GA LIL GAGTAS+VT+LPHTEVFDAT AVK   E
Sbjct:  490 SSGGQAFGILLGLGSACFGGMYILNAKSARNKVEVSHFAFIASIVPAALCTVVLLAAYGGSPEGRVLLFGTSGLFGWTQSPALVLVQVVTSVLGDMVGNFGFYLLLKYISPLVVSLASLTVPLLAVVEGLMLGVVSPPGILFGIGASLILTGAGTASMVTLLPHTEVFDATEAVKTTQE 668          
BLAST of mRNA_H-paniculata_contig14843.2883.1 vs. uniprot
Match: D7FND8_ECTSI (Drug/Metabolite transporter superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND8_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 3.340e-73
Identity = 124/159 (77.99%), Postives = 143/159 (89.94%), Query Frame = 0
Query:  137 VYILSAKAARSKVAVSHFAFVASIVPAVVCAVVLVAGFAGSKSGRVVLFGPAGLLGWTQTPGLALTQVLTSLLGDVIGNFGFYLLLKYISPLVVSLASLTVPLLAVVEGLMLGVVTPPGVLFGVGALLILVGAGTASVVTMLPHTEVFDATTAVKLANE 295
            +YIL+AK+AR+KV VSHFAF+ASIVPA +C VVL+A + GS  GRV+LFG +GLLGWTQTPGL L QV+TS+LGD++GNFGFYLLLKYISPLVVSLASLTVPLL VVEGLMLGVV+PPG+LFG+GA LIL GAGTAS+VT+LPHTEVFDAT AVK  NE
Sbjct:    1 MYILNAKSARNKVEVSHFAFIASIVPAALCTVVLLAAYGGSAEGRVLLFGTSGLLGWTQTPGLVLVQVVTSVLGDMVGNFGFYLLLKYISPLVVSLASLTVPLLTVVEGLMLGVVSPPGILFGIGAFLILTGAGTASMVTLLPHTEVFDATDAVKTTNE 159          
BLAST of mRNA_H-paniculata_contig14843.2883.1 vs. uniprot
Match: A0A061S7N4_9CHLO (Drug metabolite transporter superfamily n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S7N4_9CHLO)

HSP 1 Score: 77.8 bits (190), Expect = 2.420e-12
Identity = 75/271 (27.68%), Postives = 132/271 (48.71%), Query Frame = 0
Query:    6 ELRDWSLMLPVVVAGVGLAGWGLCFYTALNFASASMVALLASLTPMFLVVWRGVTGEAVHRLEIVGVLLALAGGVVSTIGEGGGDDGADNDAGDTAAKAIA--VAGADSAPTVSTGGQAFGIALALMTACWGGVYILSAKAARSKVAVSHFAFVASIVPAVV-----CAVVLVAGFAGSKSGRVVLFGPAGLLGWTQTPGLALTQVLTSLLGDVIGNFGFYLLLKYISPLVVSLASLTVPLLAVVEGLMLGVVTPPGVLFGVGALLILVGA 269
             LRD   +L ++      + +   F  AL++ +     LL++   M ++VWR + G  V   E  GV L L+G  V+++ +        N   + AA  ++  ++G+   P +    Q FG  L++++   G +YI SA   R KV +S F ++  ++  VV     C + L+ G        +      GL GW  TP       L S++G ++G   +  ++KY+ P+VVS+A L  P + V+ G+M G  + PG+   +G+ + +VGA
Sbjct:  384 SLRDPMTVLELLATAFFSSQYISFFVVALSYTNLETAFLLSNCHSMLIIVWRLLRGNPVTLFEGAGVFLGLSGAAVASLDKEKPPVHGANGVLELAAGLLSHGLSGSKIPPELQK--QLFGAGLSVLSGICGALYITSASRVRQKVEMSVFMWILLLLHCVVYVACLCGLTLLQGHPLDSVMTLDFDTVTGLFGWA-TPERIYATALCSVIGTILGTCVYVAVMKYLDPIVVSVAMLCEPFMGVISGVMFGQASWPGLWGWLGSSVSVVGA 651          
BLAST of mRNA_H-paniculata_contig14843.2883.1 vs. uniprot
Match: D7FND7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND7_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 1.660e-9
Identity = 30/35 (85.71%), Postives = 34/35 (97.14%), Query Frame = 0
Query:    1 RSARAELRDWSLMLPVVVAGVGLAGWGLCFYTALN 35
            +SARAELRDWSL+LPVV+AG GLAGWGLCFY+ALN
Sbjct:  639 KSARAELRDWSLVLPVVLAGTGLAGWGLCFYSALN 673          
BLAST of mRNA_H-paniculata_contig14843.2883.1 vs. uniprot
Match: A0A150G533_GONPE (Glutamate--cysteine ligase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G533_GONPE)

HSP 1 Score: 60.5 bits (145), Expect = 1.420e-6
Identity = 81/291 (27.84%), Postives = 115/291 (39.52%), Query Frame = 0
Query:    7 LRDWSLMLPVVVAGVG----------------------LAGWGLCFYT-------ALNFASASMVALLASLTPMFLVVWRGVTGEAVHRLEIVGVLLALAGGVVSTIGEGGGDDGADNDAGDTAAKAIAVAGADSAPTVSTGGQAFGIALALMTACWGGVYILSAKAARSKVAVSHFAFVASIVPAVVCAVVLVAGFAGSKSGRVVLFGPAGLLGWTQTPGLALTQVLTSLLGDVIGNFGFYLLLKYISPLVVSLASLTVPLLAVVEGLMLGVVTPPGVLFGVGALLILVG 268
            L  W L L  V  G+G                      LAG G C           L   S +   LL S TP+ L V    +GEA+ R E+ G +L  AG +V + G  GG +     AGD A+                      +A A+M       Y+   +  R  + +  +AF    V     A + +AG A      +   G  G+ GW  +   A   V  +L   ++G+ GF  LL+Y++PL VSLA    PL+    G   GV   PG L  +G  L+L+G
Sbjct:   92 LAAWRLQLTSVFLGIGAAAQWRQLTPADRTRTLRSAGWLAGSGACLAVHFGAWVWGLQHTSLTHSLLLVSATPLLLAVLAAASGEALSRGELGGTVLGAAGAIVLSAGAAGGGEAKAGLAGDLASL---------------------LASAVMVG-----YLSVGRRLRQWMPIFVYAFP---VTGTAAAALTLAGLAVEPV-HLTGAGSRGVFGWVASRHHAPWVVYLALGPGIVGHTGFNTLLRYLTPLAVSLAFQMEPLVGSAIGWAAGVSGAPGALTALGGALVLIG 352          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14843.2883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JIJ2_9PHAE9.380e-7575.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FND8_ECTSI3.340e-7377.99Drug/Metabolite transporter superfamily n=1 Tax=Ec... [more]
A0A061S7N4_9CHLO2.420e-1227.68Drug metabolite transporter superfamily n=1 Tax=Te... [more]
D7FND7_ECTSI1.660e-985.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A150G533_GONPE1.420e-627.84Glutamate--cysteine ligase n=1 Tax=Gonium pectoral... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22911:SF76coord: 12..269
NoneNo IPR availablePANTHERPTHR22911ACYL-MALONYL CONDENSING ENZYME-RELATEDcoord: 12..269
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..228
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..250
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..121
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 279..295
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..278
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 251..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 9..86
NoneNo IPR availableTMHMMTMhelixcoord: 119..141
NoneNo IPR availableTMHMMTMhelixcoord: 154..176
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 39..56
NoneNo IPR availableTMHMMTMhelixcoord: 229..251
NoneNo IPR availableTMHMMTMhelixcoord: 200..222
NoneNo IPR availableTMHMMTMhelixcoord: 256..278
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14843contigH-paniculata_contig14843:1155..6134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14843.2883.1mRNA_H-paniculata_contig14843.2883.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14843 1155..6134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14843.2883.1 ID=prot_H-paniculata_contig14843.2883.1|Name=mRNA_H-paniculata_contig14843.2883.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=295bp
RSARAELRDWSLMLPVVVAGVGLAGWGLCFYTALNFASASMVALLASLTP
MFLVVWRGVTGEAVHRLEIVGVLLALAGGVVSTIGEGGGDDGADNDAGDT
AAKAIAVAGADSAPTVSTGGQAFGIALALMTACWGGVYILSAKAARSKVA
VSHFAFVASIVPAVVCAVVLVAGFAGSKSGRVVLFGPAGLLGWTQTPGLA
LTQVLTSLLGDVIGNFGFYLLLKYISPLVVSLASLTVPLLAVVEGLMLGV
VTPPGVLFGVGALLILVGAGTASVVTMLPHTEVFDATTAVKLANE
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