prot_H-paniculata_contig14834.2878.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14834.2878.1 vs. uniprot
Match: W7T0D1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0D1_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 5.130e-22 Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 0 Query: 3 GEDIFETSAPVARMSTLRTGFSLVAKHDLELEDMDVDVAYMNAPVEEELFFKLPPEFSPF-SRDIPFVCRLRESLEDLKQSGRNWKITPDDFLVGIGIQRSTTDPCL 108 G D T APVA ++T+R +L DLEL++MDVD AY+ + +EE+++ K PP + + S VCRLR+SL LKQSGRNW D + G G S+TDPCL Sbjct: 309 GYDYLHTYAPVASITTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSTDPCL 415
BLAST of mRNA_H-paniculata_contig14834.2878.1 vs. uniprot
Match: W7TH08_9STRA (RNA-dependent DNA polymerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TH08_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 5.270e-21 Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 0 Query: 3 GEDIFETSAPVARMSTLRTGFSLVAKHDLELEDMDVDVAYMNAPVEEELFFKLPPEFSPFSRDI-PFVCRLRESLEDLKQSGRNWKITPDDFLVGIGIQRSTTDPCL 108 G D +T APVA M+T+R +L DLEL++MDVD AY+ + +EE++ K PP + + + VCRLR+SL LKQSGRNW D + G S+ DPCL Sbjct: 136 GYDYLQTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVHIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYAFHPSSADPCL 242
BLAST of mRNA_H-paniculata_contig14834.2878.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 6.150e-21 Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0 Query: 3 GEDIFETSAPVARMSTLRTGFSLVAKHDLELEDMDVDVAYMNAPVEEELFFKLPPEFSPFSRDI-PFVCRLRESLEDLKQSGRNWKITPDDFLVGIGIQRSTTDPCL 108 G D T APVA M+T+R +L DLEL++MDVD AY+ + +EE+++ K PP + + + VCRLR+SL LKQSGRNW D + G G+ S DPCL Sbjct: 271 GYDYLHTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCL 377
BLAST of mRNA_H-paniculata_contig14834.2878.1 vs. uniprot
Match: W7TII5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TII5_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.520e-20 Identity = 48/109 (44.04%), Postives = 67/109 (61.47%), Query Frame = 0 Query: 3 GEDIFETSAPVARMSTLRTGFSLVAKHDLELEDMDVDVAYMNAPVEEELFFKLPPEFS---PFSRDIPFVCRLRESLEDLKQSGRNWKITPDDFLVGIGIQRSTTDPCL 108 G D T APVA ++T+R ++ DLEL++MDVD AY+ + +EE+++ K PP + P ++ VCRLR+SL LKQSGRNW D + G G S+ DPCL Sbjct: 51 GYDYLNTYAPVASITTIRLILAIACILDLELDNMDVDTAYLQSDLEEKIYVKQPPGYEQCGPNGEEL--VCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCL 157
BLAST of mRNA_H-paniculata_contig14834.2878.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.100e-20 Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 0 Query: 3 GEDIFETSAPVARMSTLRTGFSLVAKHDLELEDMDVDVAYMNAPVEEELFFKLPPEFSPF-SRDIPFVCRLRESLEDLKQSGRNWKITPDDFLVGIGIQRSTTDPCL 108 G D T APVA ++T+R +L DLEL++MDV+ AY+ + +EE+++ K PP + + S VCRLR+SL LKQSGRNW D + G G S+ DPCL Sbjct: 51 GYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCL 157
BLAST of mRNA_H-paniculata_contig14834.2878.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 4.070e-20 Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 0 Query: 3 GEDIFETSAPVARMSTLRTGFSLVAKHDLELEDMDVDVAYMNAPVEEELFFKLPPEFSPFSRDI-PFVCRLRESLEDLKQSGRNWKITPDDFLVGIGIQRSTTDPCL 108 G D +T APVA M+T+R +L DLEL++MDVD AY+ + +EE+++ K P + + + VCRLR+SL LKQSGRNW D + G G S+ DPCL Sbjct: 569 GYDYLQTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPHGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCL 675
BLAST of mRNA_H-paniculata_contig14834.2878.1 vs. uniprot
Match: W7T9Y7_9STRA (Retrotransposon ty1-copia subclass n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9Y7_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.760e-19 Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 0 Query: 3 GEDIFETSAPVARMSTLRTGFSLVAKHDLELEDMDVDVAYMNAPVEEELFFKLPP---EFSPFSRDIPFVCRLRESLEDLKQSGRNWKITPDDFLVGIGIQRSTTDPCL 108 G + T APVA ++T+R ++ DLEL++MDVD AY+ + +EE+++ K PP ++ P ++ VC L +SL LKQSG NW D + G G S+TDPCL Sbjct: 35 GYEYLNTYAPVASITTIRLILAIACILDLELDNMDVDTAYLQSDLEEKIYVKQPPGYEQYGPNGEEL--VCLLHKSLYGLKQSGINWHKKIDGWFRGYGFHSSSTDPCL 141
BLAST of mRNA_H-paniculata_contig14834.2878.1 vs. uniprot
Match: W7TWT0_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWT0_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.600e-19 Identity = 47/109 (43.12%), Postives = 66/109 (60.55%), Query Frame = 0 Query: 3 GEDIFETSAPVARMSTLRTGFSLVAKHDLELEDMDVDVAYMNAPVEEELFFKLP---PEFSPFSRDIPFVCRLRESLEDLKQSGRNWKITPDDFLVGIGIQRSTTDPCL 108 G D T APVA M+T+R +L D EL++MDV+ AY+ + +EE+++ K P ++ P ++ VCRLR+SL LKQSGRNW D + G G S+ DPCL Sbjct: 242 GYDYLHTCAPVASMTTIRLILALACILDSELDNMDVETAYLQSDLEEKVYIKQPIGYEQYGPNGEEL--VCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCL 348
BLAST of mRNA_H-paniculata_contig14834.2878.1 vs. uniprot
Match: W7TJI6_9STRA (Retrotransposon ty1-copia subclass n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJI6_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 5.470e-19 Identity = 45/107 (42.06%), Postives = 65/107 (60.75%), Query Frame = 0 Query: 5 DIFETSAPVARMSTLRTGFSLVAKHDLELEDMDVDVAYMNAPVEEELFFKLPP---EFSPFSRDIPFVCRLRESLEDLKQSGRNWKITPDDFLVGIGIQRSTTDPCL 108 D T APVA M+ +R +L DLEL++MDVD AY+ + +EE+++ K PP ++ P ++ +CRL +SL LKQSGRNW D++ G S+ DPCL Sbjct: 95 DYLHTYAPVASMTRIRLILALACILDLELDNMDVDTAYLQSDLEEKIYVKQPPGYEQYGPNGEEL--LCRLHKSLYGLKQSGRNWHKKIDEWFRGYCFHSSSADPCL 199
BLAST of mRNA_H-paniculata_contig14834.2878.1 vs. uniprot
Match: W7T0T3_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0T3_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.690e-18 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0 Query: 3 GEDIFETSAPVARMSTLRTGFSLVAKHDLELEDMDVDVAYMNAPVEEELFFKLPPEFSPF-SRDIPFVCRLRESLEDLKQSGRNWKITPDDFLVGIGIQRSTTDPCL 108 G D T APVA ++T+R ++ DLEL++MDV+ AY+ + +EE+++ K P + + S VCRLR+SL LKQSGRNW D + G G S+ DPCL Sbjct: 491 GYDYLYTYAPVASITTIRLILAIACILDLELDNMDVETAYLQSDLEEKVYVKQPIGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCL 597 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14834.2878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig14834.2878.1 ID=prot_H-paniculata_contig14834.2878.1|Name=mRNA_H-paniculata_contig14834.2878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|