prot_H-paniculata_contig14827.2872.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14827.2872.1
Unique Nameprot_H-paniculata_contig14827.2872.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length265
Homology
BLAST of mRNA_H-paniculata_contig14827.2872.1 vs. uniprot
Match: D8LNG9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG9_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 8.510e-113
Identity = 188/262 (71.76%), Postives = 211/262 (80.53%), Query Frame = 0
Query:    1 RLYHEPVSLPCGHTYCRGCLKRALASKPQQCPMCRAACRTAAGESGTNLAMVNIIKSQFGKEYDARGKEAEKDAVVEAEARRRAFALGESVTPAPDGSVSMPVCLLDVLLFPHQPVTLYLFEPRYITLVNRCLSDTRRFAVFPDRSPAAGAAGSILEISDARMVGEGQYLVMCRGVGRCTSVAEFEIEEGTRGLRYARVAPFEDEEXXXXXXXXXXXDTAAAGDRASAHEDGAGARTGRVRTADDVLGPELRELADSTSTVI 262
            RLYHEPVSLPCGHTYCRGCLKRALA+K Q CPMCRAAC   AG+ GTNLAMV+IIKSQFG++Y+ R  EAE DA+VEAE RRRA  +GESVTPAPDGSV MPVCLLD+LLFP QPVTLYLFEPRYIT+VNRCLS TRRFAVF D+SP+ G +G+ILEISDARM+  GQYL+MCRGVGRC S AEFE+E GT GLR+ARV+PFED+ XXXXXXXXXXX       R                TAD+VLGPELR+LAD TS V+
Sbjct:   65 RLYHEPVSLPCGHTYCRGCLKRALANKTQ-CPMCRAACHLGAGDCGTNLAMVSIIKSQFGRQYEERENEAEHDAMVEAETRRRAHTIGESVTPAPDGSVLMPVCLLDMLLFPLQPVTLYLFEPRYITMVNRCLSSTRRFAVFQDQSPSTGLSGAILEISDARMMNRGQYLIMCRGVGRCNSSAEFEVEAGTGGLRHARVSPFEDDXXXXXXXXXXXXXXXXXXRRV---------------TADEVLGPELRDLADRTSVVV 310          
BLAST of mRNA_H-paniculata_contig14827.2872.1 vs. uniprot
Match: A0A835YVY5_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY5_9STRA)

HSP 1 Score: 172 bits (437), Expect = 2.340e-48
Identity = 99/242 (40.91%), Postives = 134/242 (55.37%), Query Frame = 0
Query:    1 RLYHEPVSLPCGHTYCRGCLKRALASKPQQCPMCRAACRTAAGESGTNLAMVNIIKSQFGKEYDARGKEAEKDAVVEAEARRRAFALGESVTPAPDGSVSMPVCLLDV-LLFPHQPVTLYLFEPRYITLVNRCLSDTRRFAVFPDRSPAAGAAGSILEISDARMVGE-----------------------------------GQYLVMCRGVGRCTSVAEFEIEEGTRGLRYARVAPFEDEE 206
            RL++EPVS+ CGH+YCRGCL+RAL  K   CP+CRA     A ++  NLAMV+ I+     EY AR +EA  DA  EA A +RA  LGE  T  PDGSV M V +    L+FP QP+TL+++EP+Y+ +V RCLS  RRF +   R+   G+ G++++I DARM+G                                    GQYL+   GVGRC  V+    E    GLR A + P +D++
Sbjct:   93 RLFYEPVSIACGHSYCRGCLRRALRFKAS-CPICRAPLHAGAADAAANLAMVSFIQRDCAAEYAARAREAAADAAEEAAAAKRALTLGEDATLLPDGSVQMEVFVDRYSLVFPGQPITLFVYEPQYVIMVTRCLSGGRRFVM--QRAAERGSVGTVVQIDDARMLGRLWMPETVSTRAASALRSAPPLQRSDPPSELRGRGGGQYLLQAHGVGRCVCVSALVAEAEAHGLRSASIVPLDDDD 331          
BLAST of mRNA_H-paniculata_contig14827.2872.1 vs. uniprot
Match: A0A7S1G500_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G500_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.890e-28
Identity = 77/200 (38.50%), Postives = 104/200 (52.00%), Query Frame = 0
Query:    5 EPVSLPCGHTYCRGCLKRALASKPQQCPMCRAACRTAAGESGTNLAMVNIIKSQFGKEYDARGKEAEKDAVVEAEARRRAFALGESVTPAPDGSVSMPVCLLDVLLFPHQPVTLYLFEPRYITLVNRCLSDTRRFAVFPDRSPAAGAAGSILEISDARMVGEGQYLVMCRGVGRCTSVAEFEIEEGTRGLRYARVAPFED 204
            EPV+L CGHTYCR CL+ AL    + CPMCRA    AA E   N+ +  +I+ +F  E  AR  E E + V EAEA R    + E +                 L++P QPVT  +FEPRY  +V RC+  +RRF +   ++  A   G ++EI+  R V  G   + CR   R  + A   +EEGT GL YA +   ED
Sbjct:   39 EPVTLGCGHTYCRRCLRNALRVN-RHCPMCRAPTYVAANEQPANVLLTRLIERKFPAELAARRAE-EAEEVREAEADRLPIFVQEGL-----------------LVYPTQPVTFNIFEPRYRIMVQRCMEGSRRFGL---QTTPASTVGVVVEINSVRQVSVGVLQIGCRARSRYRTRATAAVEEGTGGLLYADIELLED 216          
BLAST of mRNA_H-paniculata_contig14827.2872.1 vs. uniprot
Match: A0A7S2XUD8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUD8_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.450e-27
Identity = 80/223 (35.87%), Postives = 119/223 (53.36%), Query Frame = 0
Query:    1 RLYHEPVSLPCGHTYCRGCLKRALASKPQQCPMCRAACRTAAGESGTNLAMVNIIKSQFGKEYDARGKEAEK----DAVVEAEARR----RAFALGESVTPAPDGSV---SMPVCLLDVLLFPHQPVTLYLFEPRYITLVNRCLSDTRRFAVFPDRSPAA-GAAGSILEISDARMVG--EGQYLVMCRGVGRCT-----SVAEFEIEEGTRGLRYARVAPFED 204
            +L +EPVSLPCGH++CR CL+RAL  K ++CP+CRAAC   A  +  N+A+     S+  K + AR +E E+    D   +A+A R    R+ A   S     +GS    ++P+ L  + L PHQP+    FEPRY+ +V R L+  R F + P  S    G  G ++ +   + +     +Y+V  +   R T     S+ E   E GT GL YA V P++D
Sbjct:   31 KLLYEPVSLPCGHSFCRRCLRRALTYK-KECPLCRAACLPGAASNAVNIALETFASSRLPKAWAARKQECEEEDDEDRQADAQAARVLSGRSQASPASAAVPEEGSGVSHTVPLFLFPLQLVPHQPMIFQFFEPRYVVMVERLLAGNRLFGLQPSASEDRDGPPGLLMMVEQCQQIPGPHTRYVVQTKVASRYTIQDPSSIVE---EPGTMGLHYATVQPYDD 249          
BLAST of mRNA_H-paniculata_contig14827.2872.1 vs. uniprot
Match: A0A7S0CSC1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CSC1_9EUKA)

HSP 1 Score: 107 bits (266), Expect = 1.350e-23
Identity = 62/203 (30.54%), Postives = 99/203 (48.77%), Query Frame = 0
Query:    5 EPVSLPCGHTYCRGCLKRALASKPQQCPMCRAACRTAAGESGTNLAMVNIIKSQFGKEYDARGKEAEKDAVVEAEARRRAFALGESVTPAPDGSVSMPVCLLDVLLFPHQPVTLYLFEPRYITLVNRCLSDTRRFAVFP---DRSPAAGAAGSILEISDARMVGEGQYLVMCRGVGRCTSVAEFEIEEGTRGLRYARVAPFED 204
            EP+++PCGHT+CR CL  A+    ++CP CRA C         N+ + NI +  F KEY  R +E +        A ++ F              ++P+   +  LFP   + L+LFE RY  ++NRC+S  R+F   P   D    AG  G +  + +   + +G+ L+    V R   +    +EEGT+GL Y +   +E+
Sbjct:   41 EPITIPCGHTFCRSCLYLAMQRTKKKCPNCRAVCHVDPSSHSVNVMLANIAQKCFPKEYKKRAEECK--------ALKQKF------------QTTLPIFFYNNCLFPGCLLHLHLFEQRYRHMINRCVSSNRQFLYLPNFSDYKATAGDVGLLAYVDECEFLSDGRALLKATLVKRVV-ITNSWVEEGTQGLHYCQYQAYEE 222          
BLAST of mRNA_H-paniculata_contig14827.2872.1 vs. uniprot
Match: A0A6B2LCC5_9EUKA (RING-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LCC5_9EUKA)

HSP 1 Score: 102 bits (255), Expect = 3.100e-22
Identity = 64/204 (31.37%), Postives = 101/204 (49.51%), Query Frame = 0
Query:    5 EPVSLPCGHTYCRGCLKRALASKPQQCPMCRAACRTAAGESGTNLAMVNIIKSQFGKEYDARGKEAEKDAVVEAEARRRAFALGESVTPAPDGSVSMPVCLLDVLLFPHQPVTLYLFEPRYITLVNRCLSDTRRFAVFPDRS---PAAGAAGSILEISDARMVGEGQYLVMCRGVGRCTSVAEFEIEEGTRGLRYARVAPFEDE 205
            EP+S+PCGHT+CR CL  A     ++CP+CRA C   A     N+ + +I+K+ F K+Y  R KE E+                           ++P+   +  LFP   + L+LFE RY  ++ R L   R+F   P+ +    + G  G + E+ + R + +G+ L+  R V R   VA+  +E+GT  L Y +   F+DE
Sbjct:   12 EPISVPCGHTFCRTCLVAAQQRAQKKCPVCRAVCVIDATAQKENVQLASILKTCFPKQYAERLKEVEETKKT--------------------WKQNLPIFFFNDTLFPGGVLKLHLFEERYKLMIKRVLEGNRKFVYLPNFTNYKASKGDVGVVAEVLECRFLHDGRALLQARIVERAV-VADSWVEDGTGNLAYCQYELFKDE 194          
BLAST of mRNA_H-paniculata_contig14827.2872.1 vs. uniprot
Match: A0A6H5KHS7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS7_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 4.710e-22
Identity = 70/218 (32.11%), Postives = 106/218 (48.62%), Query Frame = 0
Query:    1 RLYHEPVSLPCGHTYCRGCLKRALASKPQQCPMCRAACRT--AAGESGTNLAMVNIIKSQFGKEYDARGKEAEKDAVVEAEARRRAFALGESVTPAPDGSVSMPVCLLDVLLFPHQPVTLYLFEPRYITLVNRCLSDTRRFA-VFPDRSPAA----------GAAGSILEISDARMVGEGQYLVMCRGVGRCTSVAEFEIEEGTRGLRYARVAPFEDE 205
            +L  EPVSLPCGHT+CR CL + L  KP++CP C A C T   A +   N+ +  I KS F +  + R        + E EA +  F L             +P     V +FP Q + ++ FEPRY  ++ R ++ +RRFA V P   P+           G       + +A  + + + +V  +  GR T V +F +E GT  L Y ++ PF+D+
Sbjct:   34 QLLAEPVSLPCGHTFCRVCLVKELRRKPKECPSCHATCHTRQVAEDQPQNVMLAQIAKSLFPELLERR--------LRETEAEKAKFEL------------CLPAFFYSVPVFPGQTLCVHFFEPRYKLMMQRIINTSRRFAYVLPAPVPSTNDDDRNTDQQGRIALEAHVCEAEFLSDDRVMVKIKLAGRHTVVEDF-VEAGTGNLHYCQLEPFDDD 230          
BLAST of mRNA_H-paniculata_contig14827.2872.1 vs. uniprot
Match: A0A6U2J5U5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2J5U5_HEMAN)

HSP 1 Score: 102 bits (253), Expect = 6.320e-22
Identity = 64/202 (31.68%), Postives = 102/202 (50.50%), Query Frame = 0
Query:    1 RLYHEPVSLPCGHTYCRGCLKRALASKPQQCPMCRAACRTAAGESGTNLAMVNIIKSQFGKEYDARGKEAEKDAVVEAEARRRAFALGESVTPAPDGSVSMPVCLLDVLLFPHQPVTLYLFEPRYITLVNRCLSDTRRFAVFP--DRSPA-AGAAGSILEISDARMVGEGQYLVMCRGVGRCTSVAEFEIEEGTRGLRYARV 199
            +L  EPV+ PCGH++CR CL   L    ++CP CRA C+         +A+ ++ K+ F K Y  R        ++E +A + ++               +P+   +  LFP  P+ L LFEPRY  +++R +  +RRFA  P  D   A  G  G I EI+D   + +G+  +  +   R T + E  IE+GT+GL + +V
Sbjct:   21 QLLCEPVTTPCGHSFCRPCLVGTLRKNKKKCPSCRAICQIEPETHSETIALSSVAKAVFPKAYQQR--------ILEVQAEKASW------------DTILPIFFYNDTLFPFSPLALNLFEPRYKVMLHRIVESSRRFAYLPKFDTYQANVGDMGVIAEITDIEFLADGRAHLQAKCRDRFT-IKEAWIEDGTQGLHWCKV 201          
BLAST of mRNA_H-paniculata_contig14827.2872.1 vs. uniprot
Match: A0A6V3MPG8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3MPG8_9EUKA)

HSP 1 Score: 100 bits (249), Expect = 4.080e-21
Identity = 60/205 (29.27%), Postives = 101/205 (49.27%), Query Frame = 0
Query:    5 EPVSLPCGHTYCRGCLKRALASKPQQCPMCRAACRTAAGESGTNLAMVNIIKSQFGKEYDARGKEAEKDAVVEAEARRRAFALGESVTPAPDGSVSMPVCLLDVLLFPHQPVTLYLFEPRYITLVNRCLSDTRRFAVFP---DRSPAAGAAGSILEISDARMVGEGQYLVMCRGVGRCTSVAEFEIEEGTRGLRYARVAPFEDEE 206
            +P+++PCGHT+CR CL  A+    ++CP CRA C         N+ +  I +  F K+Y+ R        ++E++  +  F   ES +P         +   +  LFP   + L+LFE RY  ++NRC+S  R+F   P   D     G  G +  I +   + +G+ L+    + +   V    +EEGT+GL Y +  P+ +E+
Sbjct:   44 QPITVPCGHTFCRVCLYMAMQRSKKKCPNCRAVCHVEPASHAVNVMLAQIAQKCFPKQYEQR--------LLESKQEQEKF---ESTSP---------IFFYNNCLFPGCLLHLHLFEQRYRHMINRCVSSNRKFIYLPNFTDYKAKTGDVGLLAYIDECEFLPDGRALLKAT-IQKRVKVTNTWVEEGTQGLHYCQFHPYVEED 227          
BLAST of mRNA_H-paniculata_contig14827.2872.1 vs. uniprot
Match: A0A482RY16_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY16_9ARCH)

HSP 1 Score: 98.2 bits (243), Expect = 1.340e-20
Identity = 59/204 (28.92%), Postives = 102/204 (50.00%), Query Frame = 0
Query:    5 EPVSLPCGHTYCRGCLKRALASKPQQCPMCRAACRTAAGESGTNLAMVNIIKSQFGKEYDARGKEAEKDAVVEAEARRRAFALGESVTPAPDGSVSMPVCLLDVLLFPHQPVTLYLFEPRYITLVNRCLSDTRRFAVFPDRS---PAAGAAGSILEISDARMVGEGQYLVMCRGVGRCTSVAEFEIEEGTRGLRYARVAPFEDE 205
            EP+S+ CGHT+CR CL +AL    +QCP CR  C  +A  +  N+ +  +  +   + Y +R        ++EAE  + ++            +   P+   + +LFP   ++L LFEPRY  ++ R +  TR FA  P+ +      G    ++E+ +   + +G+ L+    V R   +AE  +E+GT+GL Y R+    D+
Sbjct:   48 EPISISCGHTFCRVCLVKALRRHKKQCPTCREVCHVSAENAAENIMVKTLAMALDPETYRSR--------LLEAEGEKSSW------------TALYPIFYYNSILFPGNKLSLVLFEPRYKLMMRRIIDTTRSFAYVPNFTNYHARVGDVALVVELKEVEFLADGRCLLEGLLVSR-QRIAEHYVEQGTQGLHYCRLESLRDD 230          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14827.2872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNG9_ECTSI8.510e-11371.76RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835YVY5_9STRA2.340e-4840.91RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S1G500_9STRA3.890e-2838.50Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2XUD8_9STRA1.450e-2735.87Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0CSC1_9EUKA1.350e-2330.54Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A6B2LCC5_9EUKA3.100e-2231.37RING-type domain-containing protein n=1 Tax=Arcell... [more]
A0A6H5KHS7_9PHAE4.710e-2232.11RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6U2J5U5_HEMAN6.320e-2231.68Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A6V3MPG8_9EUKA4.080e-2129.27Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A482RY16_9ARCH1.340e-2028.92RING-type domain-containing protein n=1 Tax=archae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..86
e-value: 7.0E-17
score: 63.5
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 3..34
e-value: 6.0E-7
score: 29.2
NoneNo IPR availableGENE3D2.30.130.40coord: 87..200
e-value: 1.2E-14
score: 55.9
NoneNo IPR availablePANTHERPTHR23327:SF42ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEINcoord: 2..231
NoneNo IPR availablePANTHERPTHR23327RING FINGER PROTEIN 127coord: 2..231
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 2..55
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 11..20
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 9..35
score: 9.642
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 101..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14827contigH-paniculata_contig14827:205..4206 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14827.2872.1mRNA_H-paniculata_contig14827.2872.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14827 205..4206 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14827.2872.1 ID=prot_H-paniculata_contig14827.2872.1|Name=mRNA_H-paniculata_contig14827.2872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=265bp
RLYHEPVSLPCGHTYCRGCLKRALASKPQQCPMCRAACRTAAGESGTNLA
MVNIIKSQFGKEYDARGKEAEKDAVVEAEARRRAFALGESVTPAPDGSVS
MPVCLLDVLLFPHQPVTLYLFEPRYITLVNRCLSDTRRFAVFPDRSPAAG
AAGSILEISDARMVGEGQYLVMCRGVGRCTSVAEFEIEEGTRGLRYARVA
PFEDEEEREVAAAAAAADTAAAGDRASAHEDGAGARTGRVRTADDVLGPE
LRELADSTSTVISA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR017907Znf_RING_CS
IPR001841Znf_RING
IPR015947PUA-like_sf