prot_H-paniculata_contig14817.2870.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14817.2870.1
Unique Nameprot_H-paniculata_contig14817.2870.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length319
Homology
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BLAST of mRNA_H-paniculata_contig14817.2870.1 vs. uniprot
Match: A0A6H5KN63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN63_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 5.020e-19
Identity = 68/178 (38.20%), Postives = 88/178 (49.44%), Query Frame = 0 
Query:  137 AVVRTASRTASPQQELGITQRLLLPHFPANLAAKRLARGILIGVPVVGAALSAWLARSDMRRTYQEIAIARSDHARALARASRIKHTHGD-------------LSPTVNTGTVNCFGVATAADSVNVVAHLITAFGLYQGWEPDPIAAAESASLLAAVVSTGAAVGGEYLSARRATRL 301
            A  +TA  T +P    GI   L     PA  AA R  RG LI +P+VG   SAW   +D RR   E+  A    A A     R     GD               PT++   V  F VA  AD+  +  HL+ A+GL+ GW+PDPI  AE  +L+AAVVSTG  + GEYL+A R  ++
Sbjct:  100 ATAQTAPNTGTPPAAGGIFGNL-----PARTAAARAGRGCLIALPIVGIGFSAWTCVTDYRRVRHELKRACVGLALAEMSFQREAGRKGDSXXXXXXXXXNSATRPTLDASPVRSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRMRQI 272
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BLAST of mRNA_H-paniculata_contig14817.2870.1 vs. uniprot
Match: D7FNY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY0_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.210e-18
Identity = 66/172 (38.37%), Postives = 84/172 (48.84%), Query Frame = 0 
Query:  137 AVVRTASRTASPQQELGITQRLLLPHFPANLAAKRLARGILIGVPVVGAALSAWLARSDMRRTYQEIAIARSDHARALARASRIKHTHGD-----------LSPTVNTGTVNCFGVATAADSVNVVAHLITAFGLYQGWEPDPIAAAESASLLAAVVSTGAAVGGEYLSARR 297
            A  + A  T +P    GI   L     PA  AA R  RG LI +P+ G   SAW   +D RR   E+ +AR   A A     R     GD             PT +      F VA  AD+  +  HL+ A+GL+ GW+PDPI  AE  +L+AAVVSTG  + GEYL+A R
Sbjct:   74 ATAQRAPNTGTPPAAGGIFGNL-----PARTAAARAGRGCLIALPLAGIGFSAWTCVTDYRRVRHELKLARVGLALAEMSYQRDAGRKGDGGXXXXDANSATRPTFDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANR 240
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14817.2870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KN63_9PHAE5.020e-1938.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNY0_ECTSI1.210e-1838.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..192
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 193..318
NoneNo IPR availableTMHMMTMhelixcoord: 172..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14817contigH-paniculata_contig14817:2367..3715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14817.2870.1mRNA_H-paniculata_contig14817.2870.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14817 2074..3822 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14817.2870.1 ID=prot_H-paniculata_contig14817.2870.1|Name=mRNA_H-paniculata_contig14817.2870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=319bp
MSHTLRCRPCYSVLRDNHRTIGGRLQVLVATTRTSTSSTTGGANNNNNGD
KNAIKATSSSKSNRKPSRTAAKLPGLHAAEQKQVVKRTQETTGMKITERV
AERVAETAAERTVAKAAASKALAAAGGQEARSIGKHAVVRTASRTASPQQ
ELGITQRLLLPHFPANLAAKRLARGILIGVPVVGAALSAWLARSDMRRTY
QEIAIARSDHARALARASRIKHTHGDLSPTVNTGTVNCFGVATAADSVNV
VAHLITAFGLYQGWEPDPIAAAESASLLAAVVSTGAAVGGEYLSARRATR
LEMEAEAGDDECRKGQSK*
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