prot_H-paniculata_contig14731.2826.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14731.2826.1
Unique Nameprot_H-paniculata_contig14731.2826.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length145
Homology
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BLAST of mRNA_H-paniculata_contig14731.2826.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.080e-21
Identity = 58/140 (41.43%), Postives = 80/140 (57.14%), Query Frame = 0 
Query:    1 LLREELATYFAELKHSEDDSFSLLRYWALRAAPTIATNTKEVILPAKSPHLAVVACLYQSLGADSCQAERNFSALCFLISDLCTRMVAAKVEQMMFLRLNQDSIPEAHARNSVIYKQQRTAAETGEAVIEAQTVAAGNTI 140
            ++  EL  Y AE    E+  FSLL +W  R+ P     T EV      PHLA++A L+  + + SCQAERNFSAL FLI  L + M+  KVE++MFLRLN+  IPE  A +  +   +  AA   E V + +  AAG+ +
Sbjct:  366 IVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEV--EPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAARCQEKVAQVEAEAAGDAV 503
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BLAST of mRNA_H-paniculata_contig14731.2826.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.430e-21
Identity = 58/140 (41.43%), Postives = 80/140 (57.14%), Query Frame = 0 
Query:    1 LLREELATYFAELKHSEDDSFSLLRYWALRAAPTIATNTKEVILPAKSPHLAVVACLYQSLGADSCQAERNFSALCFLISDLCTRMVAAKVEQMMFLRLNQDSIPEAHARNSVIYKQQRTAAETGEAVIEAQTVAAGNTI 140
            ++  EL  Y AE    E+  FSLL +W  R+ P     T EV      PHLA++A L+  + + SCQAERNFSAL FLI  L + M+  KVE++MFLRLN+  IPE  A +  +   +  AA   E V + +  AAG+ +
Sbjct:  694 IVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEV--EPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAARCQEKVAQVEAEAAGDAV 831
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14731.2826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAN7_9PHAE1.080e-2141.43Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KJ52_9PHAE1.430e-2141.43Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14731contigH-paniculata_contig14731:1469..1903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14731.2826.1mRNA_H-paniculata_contig14731.2826.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14731 1469..2288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14731.2826.1 ID=prot_H-paniculata_contig14731.2826.1|Name=mRNA_H-paniculata_contig14731.2826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp
LLREELATYFAELKHSEDDSFSLLRYWALRAAPTIATNTKEVILPAKSPH
LAVVACLYQSLGADSCQAERNFSALCFLISDLCTRMVAAKVEQMMFLRLN
QDSIPEAHARNSVIYKQQRTAAETGEAVIEAQTVAAGNTIEILS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf