prot_H-paniculata_contig14649.2779.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14649.2779.1
Unique Nameprot_H-paniculata_contig14649.2779.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig14649.2779.1 vs. uniprot
Match: A0A6H5JI46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI46_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.490e-28
Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 MVCTAVNHLHRRAVRFDLKVPADQDSDAFIYNATGNTHLLPEYMKHELSFTKKQCPLFLTKLLQNIFRS 69
            M CTAVNH+HRRAVRFDLK+P ++D   F Y ATGNTHLLPEYM+H L FTK QCPLFLTKLLQN+FR+
Sbjct:  573 MTCTAVNHVHRRAVRFDLKIPHEEDVGDFAYRATGNTHLLPEYMQHPLLFTKNQCPLFLTKLLQNLFRA 641          
BLAST of mRNA_H-paniculata_contig14649.2779.1 vs. uniprot
Match: D7FXS9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS9_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 5.270e-28
Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 MVCTAVNHLHRRAVRFDLKVPADQDSDAFIYNATGNTHLLPEYMKHELSFTKKQCPLFLTKLLQNIFRS 69
            + CTAVNH+HRRAVRFDLK+P ++D   F Y ATGNTHLLPEYM+H L FTK QCPLFLTKLLQN+FR+
Sbjct:  574 ITCTAVNHVHRRAVRFDLKIPHEEDVGDFAYRATGNTHLLPEYMQHPLLFTKNQCPLFLTKLLQNLFRA 642          
BLAST of mRNA_H-paniculata_contig14649.2779.1 vs. uniprot
Match: A0A835YUA0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA0_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 6.230e-16
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 MVCTAVNHLHRRAVRFDLKVPADQDSDAFI-YNATGNTHLLPEYMKHELSFTKKQCPLFLTKLLQNIFR 68
            ++CTAVNH+H+RAVRF LK+P D + +  + Y       LLPEYM+H LSF+ +Q PLFL +LLQ +FR
Sbjct:  667 VICTAVNHIHKRAVRFALKLPGDDEDEGEVQYAPRSGAALLPEYMQHGLSFSAEQSPLFLVQLLQGLFR 735          
BLAST of mRNA_H-paniculata_contig14649.2779.1 vs. uniprot
Match: W7UAT5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAT5_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 7.680e-8
Identity = 24/68 (35.29%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    3 CTAVNHLHRRAVRFDLKVPADQDSDAFI---YNATGNTHLLPEYMKHELSFTKKQCPLFLTKLLQNIF 67
            CTA+NH+H++AV+F LK+  D +  + +   +    N  L P +++ E +   KQCPL L  +L+ +F
Sbjct:  242 CTAINHVHKKAVKFSLKMNVDVEDSSNMDATFRPEANKELFPPFLQQEATLETKQCPLLLLSILKTLF 309          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14649.2779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JI46_9PHAE1.490e-2875.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXS9_ECTSI5.270e-2873.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YUA0_9STRA6.230e-1653.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7UAT5_9STRA7.680e-835.29Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14649contigH-paniculata_contig14649:2115..3130 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14649.2779.1mRNA_H-paniculata_contig14649.2779.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14649 1649..6226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14649.2779.1 ID=prot_H-paniculata_contig14649.2779.1|Name=mRNA_H-paniculata_contig14649.2779.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
MVCTAVNHLHRRAVRFDLKVPADQDSDAFIYNATGNTHLLPEYMKHELSF
TKKQCPLFLTKLLQNIFRS*
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