prot_H-paniculata_contig14598.2754.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14598.2754.1
Unique Nameprot_H-paniculata_contig14598.2754.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length106
Homology
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BLAST of mRNA_H-paniculata_contig14598.2754.1 vs. uniprot
Match: A0A6H5L7X6_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7X6_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.610e-26
Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 0 
Query:    1 MLKVVEAVGQRVIVGESEVSGLLFVDDFVGMSDNPERPQKQIDTAIEFARKRRLAANVKKCAVMVCNNSKIDEVDLKWKWRDEELPRVDSTRILALSFRR 100
            +++ VEAV Q V VG   VSGL+F DDFVG+S+ PE  Q+QID A+ + RK RL+ANV KCAV+VCN  K + V+ KWKW +EELP VD    L +   +
Sbjct:   59 LIRAVEAVRQGVQVGGKSVSGLMFTDDFVGVSETPEGLQEQIDAAVGYTRKWRLSANVGKCAVVVCNEDKKNPVEFKWKWGEEELPVVDRYTYLGVEISK 158
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BLAST of mRNA_H-paniculata_contig14598.2754.1 vs. uniprot
Match: A0A6H5KLS2_9PHAE (GT28 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS2_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 2.350e-25
Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 0 
Query:    1 MLKVVEAVGQRVIVGESEVSGLLFVDDFVGMSDNPERPQKQIDTAIEFARKRRLAANVKKCAVMVCNNSKIDEVDLKWKWRDEELPRVDSTRILALSFRRTVCGM 105
            +++ VEAV Q V VG   VSGL+F DDFVG+S+ PE  Q+QID A+ + RK RL+ANV KCAV+VCN  K + V+ KWKW +EELP VD + +  L F     G+
Sbjct:   13 LIRAVEAVRQGVQVGGKSVSGLMFADDFVGVSETPEGLQEQIDAAVGYTRKWRLSANVGKCAVVVCNEDKKNPVEFKWKWGEEELPVVDRS-VSGLMFADDFVGV 116
[Close]
BLAST of mRNA_H-paniculata_contig14598.2754.1 vs. uniprot
Match: A0A6H5KVE0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVE0_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.680e-24
Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 0 
Query:    1 MLKVVEAVGQRVIVGESEVSGLLFVDDFVGMSDNPERPQKQIDTAIEFARKRRLAANVKKCAVMVCNNSKIDEVDLKWKWRDEELPRVDSTRILALSFRR 100
            +++ VEAV Q V VG   VSGL+F DDFVG+S+ PE  Q+QID A+ + RK RL+ANV KCAV+VCN  K + V+ KWKW +EELP VD    L +   +
Sbjct:  260 LIRAVEAVRQGVQVGGKSVSGLMFADDFVGVSETPEGLQEQIDAAVGYTRKWRLSANVGKCAVVVCNEDKKNPVEFKWKWGEEELPVVDRYTYLGVEISK 359
[Close]
BLAST of mRNA_H-paniculata_contig14598.2754.1 vs. uniprot
Match: A0A6H5KV10_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV10_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.780e-24
Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 0 
Query:    1 MLKVVEAVGQRVIVGESEVSGLLFVDDFVGMSDNPERPQKQIDTAIEFARKRRLAANVKKCAVMVCNNSKIDEVDLKWKWRDEELPRVDSTRILALSFRR 100
            +++ VEAV Q V VG   VSGL+F DDFVG+S+ PE  Q+QID A+ + RK RL+ANV KCAV+VCN  K + V+ KWKW +EELP VD    L +   +
Sbjct:  829 LIRAVEAVRQGVQVGGKSVSGLMFADDFVGVSETPEGLQEQIDAAVGYTRKWRLSANVGKCAVVVCNEDKKNTVEFKWKWGEEELPVVDRYTYLGVEISK 928
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BLAST of mRNA_H-paniculata_contig14598.2754.1 vs. uniprot
Match: A0A6H5KTB3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB3_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.790e-24
Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 0 
Query:    1 MLKVVEAVGQRVIVGESEVSGLLFVDDFVGMSDNPERPQKQIDTAIEFARKRRLAANVKKCAVMVCNNSKIDEVDLKWKWRDEELPRVDSTRILALSFRR 100
            +++ VEAV Q V VG   VSGL+F DDFVG+S+ PE  Q+QID A+ + RK RL+ANV KCAV+VCN  K + V+ KWKW +EELP VD    L +   +
Sbjct:  328 LIRAVEAVRQGVQVGGKSVSGLMFADDFVGVSETPEGLQEQIDAAVGYTRKWRLSANVGKCAVVVCNEDKKNPVEFKWKWGEEELPVVDRYTYLGVEISK 427
[Close]
BLAST of mRNA_H-paniculata_contig14598.2754.1 vs. uniprot
Match: A0A6H5KD64_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD64_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 3.180e-24
Identity = 53/100 (53.00%), Postives = 68/100 (68.00%), Query Frame = 0 
Query:    1 MLKVVEAVGQRVIVGESEVSGLLFVDDFVGMSDNPERPQKQIDTAIEFARKRRLAANVKKCAVMVCNNSKIDEVDLKWKWRDEELPRVDSTRILALSFRR 100
            ++  VEAV Q V VG   VSGL+F DDFVG+S+ PE  Q+QID A+ + RK RL+ANV KCAV+VCN  K + V+ KWKW +EELP VD    L +   +
Sbjct:  314 LISAVEAVRQGVQVGGKSVSGLMFADDFVGVSETPEGLQEQIDAAVGYTRKWRLSANVGKCAVVVCNEDKKNPVEFKWKWGEEELPVVDRYTYLGVEISK 413
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BLAST of mRNA_H-paniculata_contig14598.2754.1 vs. uniprot
Match: A0A6H5KF79_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF79_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 6.270e-24
Identity = 52/100 (52.00%), Postives = 68/100 (68.00%), Query Frame = 0 
Query:    1 MLKVVEAVGQRVIVGESEVSGLLFVDDFVGMSDNPERPQKQIDTAIEFARKRRLAANVKKCAVMVCNNSKIDEVDLKWKWRDEELPRVDSTRILALSFRR 100
            +++ VEAV Q V VG   VSGL+F DDFVG+S+ PE  Q+QID A+ + RK RL+ NV KCAV+VCN  K + V+ KWKW +EELP VD    L +   +
Sbjct:   43 LIRAVEAVRQGVQVGGKSVSGLMFADDFVGVSETPEGLQEQIDAAVGYIRKWRLSVNVGKCAVVVCNEDKKNPVEFKWKWGEEELPVVDRYTYLGVEISK 142
[Close]
BLAST of mRNA_H-paniculata_contig14598.2754.1 vs. uniprot
Match: A0A6H5KVH1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVH1_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.040e-23
Identity = 54/102 (52.94%), Postives = 70/102 (68.63%), Query Frame = 0 
Query:    1 MLKVVEAVGQRVIVGESE--VSGLLFVDDFVGMSDNPERPQKQIDTAIEFARKRRLAANVKKCAVMVCNNSKIDEVDLKWKWRDEELPRVDSTRILALSFRR 100
            +L++VEAV + V VG++E  VSG+LF DDFVGMSD PE  Q QID A +F  K RL+ANVKK AVMVCN +K + V+ +WKW  EE+  VD    L +   +
Sbjct:   22 LLEIVEAVRKGVKVGDTETSVSGMLFADDFVGMSDTPEGLQLQIDAAKKFTDKWRLSANVKKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAK 123
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BLAST of mRNA_H-paniculata_contig14598.2754.1 vs. uniprot
Match: D7G873_ECTSI (Chromodomain-helicase-DNA-binding protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G873_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.580e-23
Identity = 52/100 (52.00%), Postives = 68/100 (68.00%), Query Frame = 0 
Query:    1 MLKVVEAVGQRVIVGESEVSGLLFVDDFVGMSDNPERPQKQIDTAIEFARKRRLAANVKKCAVMVCNNSKIDEVDLKWKWRDEELPRVDSTRILALSFRR 100
            +++ VEAV Q V V    VSGL+F DDFVG+S+ PE  Q+QID A+ + RK RL+ANV KCAV+VCN  K + V+ KWKW +EELP VD    L +   +
Sbjct: 1118 LIRAVEAVRQGVQVEGKSVSGLMFADDFVGVSETPEGLQEQIDAAVGYTRKWRLSANVGKCAVVVCNEDKKNPVEFKWKWGEEELPVVDKYTYLGVEISK 1217
[Close]
BLAST of mRNA_H-paniculata_contig14598.2754.1 vs. uniprot
Match: A0A6H5JAQ5_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ5_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 3.800e-23
Identity = 54/102 (52.94%), Postives = 70/102 (68.63%), Query Frame = 0 
Query:    1 MLKVVEAVGQRVIVGESE--VSGLLFVDDFVGMSDNPERPQKQIDTAIEFARKRRLAANVKKCAVMVCNNSKIDEVDLKWKWRDEELPRVDSTRILALSFRR 100
            +L+VVEAV + V VG++E  VSG+LF DDFVGMSD PE  Q QID A +F  K RL+ANV+K AVMVCN +K + V+ +WKW  EE+  VD    L +   +
Sbjct:   44 LLEVVEAVRKGVKVGDTETSVSGMLFADDFVGMSDTPEGLQLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAK 145
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14598.2754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7X6_9PHAE1.610e-2653.00Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KLS2_9PHAE2.350e-2552.38GT28 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KVE0_9PHAE1.680e-2453.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KV10_9PHAE1.780e-2453.00Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KTB3_9PHAE1.790e-2453.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KD64_9PHAE3.180e-2453.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KF79_9PHAE6.270e-2452.00Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KVH1_9PHAE1.040e-2352.94Reverse transcriptase domain-containing protein n=... [more]
D7G873_ECTSI1.580e-2352.00Chromodomain-helicase-DNA-binding protein 8 n=2 Ta... [more]
A0A6H5JAQ5_9PHAE3.800e-2352.94Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14598contigH-paniculata_contig14598:5726..6043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14598.2754.1mRNA_H-paniculata_contig14598.2754.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14598 4912..6469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14598.2754.1 ID=prot_H-paniculata_contig14598.2754.1|Name=mRNA_H-paniculata_contig14598.2754.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
MLKVVEAVGQRVIVGESEVSGLLFVDDFVGMSDNPERPQKQIDTAIEFAR
KRRLAANVKKCAVMVCNNSKIDEVDLKWKWRDEELPRVDSTRILALSFRR
TVCGM*
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