prot_H-paniculata_contig1459.2749.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1459.2749.1
Unique Nameprot_H-paniculata_contig1459.2749.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length333
Homology
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BLAST of mRNA_H-paniculata_contig1459.2749.1 vs. uniprot
Match: D8LQC6_ECTSI (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC6_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 2.130e-38
Identity = 152/269 (56.51%), Postives = 165/269 (61.34%), Query Frame = 0 
Query:    1 MSEIIVSKLKVSDLKAELAKRDLEVKGNKADLAQRLQAALDAEEFSIPGMAAVPAVAEPAAESSSAEASAHGNGVSGEPADAAPEVAAATEVDAEAATGDASDAAGNRQTGPITGTA-----------------AEAARLAKRIERFGRIAPATQDENAEKLAKRRAKFGLPEPVAGTDGTGQKRAMDPEEEAKRKKRMERFGIVDEKAEATARAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----QAAKKAQRIARFGEIAT 248
            MSEI VSKLKVS+LK ELA R L+VKGNKADLAQRLQAALD EEF    M   P V + A E+        GNG + EP  A P V A                                              AEA RLAKR+ERFGRIAP T+ E AEK+A RR KFGLPEP AG    G KR+++PEEEAKRKKRMERFGIVD+K EA  R EA  XXXXXXXXXXXXXXXXXXXXXXXXXXX      QA KKA+RIARFGE  T
Sbjct:    1 MSEINVSKLKVSELKTELASRSLDVKGNKADLAQRLQAALDEEEFGAISMP-TPTVGDAATEA--------GNGTAAEPP-AEPAVEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAMRLAKRVERFGRIAPVTESEVAEKMAMRREKFGLPEPAAGGK-QGTKRSLNPEEEAKRKKRMERFGIVDDKEEAAKRTEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLASEQAEKKAKRIARFGEDTT 258
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BLAST of mRNA_H-paniculata_contig1459.2749.1 vs. uniprot
Match: A0A6H5KM35_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM35_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 2.480e-38
Identity = 112/215 (52.09%), Postives = 124/215 (57.67%), Query Frame = 0 
Query:    1 MSEIIVSKLKVSDLKAELAKRDLEVKGNKADLAQRLQAALDAEEFSIPGMAAVPAVAEPAAESSSAEASAHGNGVSGEPADAAPEVAAATEVDAEAATGDASDAAGNRQTGPITGTA---------------AEAARLAKRIERFGRIAPATQDENAEKLAKRRAKFGLPEPVAGTDGTGQKRAMDPEEEAKRKKRMERFGIVDEKAEATARAEA 200
            MSEI VSKLKVS+LKAELA R L+VKGNKADLAQRLQAALD EEF    M   P V + A E+        GNG + EPA+                                                   AEA RLAKR+ERFGRIAP T+ E AEK+A RR KFGLPEP AG    G KR+++PEEEAKRKKRMERFGIVDEK EA  RAEA
Sbjct:    1 MSEINVSKLKVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMP-TPTVGDAATEA--------GNGTAAEPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAMRLAKRVERFGRIAPVTEREVAEKMAMRREKFGLPEPAAGGK-QGTKRSLNPEEEAKRKKRMERFGIVDEKEEAAKRAEA 205
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BLAST of mRNA_H-paniculata_contig1459.2749.1 vs. uniprot
Match: A0A835Z395_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z395_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 5.720e-5
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0 
Query:    1 MSEIIVSKLKVSDLKAELAKRDLEVKGNKADLAQRLQAALDAEEFSI 47
            MSE+   K+KV+DLKAELAKR+L+  G K DL QRLQAALD EEF +
Sbjct:    1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGL 47
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1459.2749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQC6_ECTSI2.130e-3856.51SAP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5KM35_9PHAE2.480e-3852.09SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z395_9STRA5.720e-565.96SAP domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 6..40
e-value: 4.4E-11
score: 52.8
IPR003034SAP domainPFAMPF02037SAPcoord: 7..40
e-value: 7.5E-11
score: 41.5
IPR003034SAP domainPROSITEPS50800SAPcoord: 6..40
score: 9.447
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 3..55
e-value: 1.5E-12
score: 48.8
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 6..43
NoneNo IPR availablePANTHERPTHR46551FAMILY NOT NAMEDcoord: 3..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1459contigH-paniculata_contig1459:4553..10163 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1459.2749.1mRNA_H-paniculata_contig1459.2749.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1459 4451..10163 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1459.2749.1 ID=prot_H-paniculata_contig1459.2749.1|Name=mRNA_H-paniculata_contig1459.2749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=333bp
MSEIIVSKLKVSDLKAELAKRDLEVKGNKADLAQRLQAALDAEEFSIPGM
AAVPAVAEPAAESSSAEASAHGNGVSGEPADAAPEVAAATEVDAEAATGD
ASDAAGNRQTGPITGTAAEAARLAKRIERFGRIAPATQDENAEKLAKRRA
KFGLPEPVAGTDGTGQKRAMDPEEEAKRKKRMERFGIVDEKAEATARAEA
EAAKRVARQEKFGFVNPNAEKKALTEQLTAEQAAKKAQRIARFGEIATPR
TNTSAAPSSTVPKTKSSGGGGGGKSGSGGGGGRGGGRGGGQGGKGRGKKQ
VTGGQGRRGGGGGGGGGGGATAMLAQGLKASR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036361SAP_dom_sf