prot_H-paniculata_contig145.2697.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig145.2697.1
Unique Nameprot_H-paniculata_contig145.2697.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length57
Homology
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BLAST of mRNA_H-paniculata_contig145.2697.1 vs. uniprot
Match: A0A6H5L2E5_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E5_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.590e-17
Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0 
Query:    1 MRPPRADVISRFHHGRVDGAALLELTDRDLLHPTEGLGITDTDTRRQILELVDAL 55
            MRPPRAD+IS+FH   VDG ALL +TDR LLHPTEGLGITD   RRQILE +D+L
Sbjct: 1264 MRPPRADIISKFHDSGVDGTALLSVTDRYLLHPTEGLGITDEVVRRQILEAMDSL 1318
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BLAST of mRNA_H-paniculata_contig145.2697.1 vs. uniprot
Match: D8LSX8_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX8_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 4.060e-17
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0 
Query:    1 MRPPRADVISRFHHGRVDGAALLELTDRDLLHPTEGLGITDTDTRRQILELVDAL 55
            MRPPRAD+IS+FH   VDG ALL +TDR LLHPTEGLGITD   RRQILE +D L
Sbjct: 1071 MRPPRADIISKFHDSGVDGTALLSVTDRYLLHPTEGLGITDEVVRRQILEAMDFL 1125
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BLAST of mRNA_H-paniculata_contig145.2697.1 vs. uniprot
Match: A0A835ZEJ2_9STRA (TRAF-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ2_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 3.990e-6
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:   16 RVDGAALLELTDRDLLHPTEGLGITDTDTRRQILELVDAL 55
            RV+GAALL+LTDRDL HP EGLGI D   R +IL  V A+
Sbjct: 1198 RVNGAALLDLTDRDLAHPVEGLGIRDGARRERILACVRAM 1237
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig145.2697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L2E5_9PHAE1.590e-1772.73SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LSX8_ECTSI4.060e-1772.73SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZEJ2_9STRA3.990e-665.00TRAF-type domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 2..56
e-value: 3.3E-7
score: 32.7
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 8..55
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 9..55
e-value: 3.4E-5
score: 24.2
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 1..56
score: 8.712

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig145contigH-paniculata_contig145:32045..32754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig145.2697.1mRNA_H-paniculata_contig145.2697.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig145 32007..32931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig145.2697.1 ID=prot_H-paniculata_contig145.2697.1|Name=mRNA_H-paniculata_contig145.2697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bp
MRPPRADVISRFHHGRVDGAALLELTDRDLLHPTEGLGITDTDTRRQILE
LVDALD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf
IPR001660SAM