prot_H-paniculata_contig1419.2542.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1419.2542.1
Unique Nameprot_H-paniculata_contig1419.2542.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
BLAST of mRNA_H-paniculata_contig1419.2542.1 vs. uniprot
Match: A0A6H5JDI2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDI2_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 8.540e-37
Identity = 69/102 (67.65%), Postives = 78/102 (76.47%), Query Frame = 0
Query:    3 RNLTPADYQQLLALDDHNHSSSGARVKPKGLSTSEISMLPTQTGNGSGDTEQCCICMDDMKPKQSITRLPACLHTFHSNCIKKWLREQASCPIDKVTVSVTD 104
            R LT  DYQQLLALDD      GA+   KGLS SEI +LP QTGNGSG  +QCC+CM+DMKP++ ITRLPACLHTFHS CI KWL+E+  CPIDKV VSV D
Sbjct:  769 RELTSEDYQQLLALDDTGXXX-GAK---KGLSPSEIGLLPQQTGNGSGPVDQCCVCMEDMKPREKITRLPACLHTFHSKCISKWLKEKPCCPIDKVAVSVND 866          
BLAST of mRNA_H-paniculata_contig1419.2542.1 vs. uniprot
Match: D7FI15_ECTSI (zf-rbx1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI15_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 1.340e-18
Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 0
Query:   59 MDDMKPKQSITRLPACLHTFHSNCIKKWLREQASCPIDKVTVSVTD 104
            M+DMKP++ ITRLPACLHTFHS CI KWL+E+  CPIDKV VSV D
Sbjct:    1 MEDMKPREKITRLPACLHTFHSKCISKWLKEKPCCPIDKVAVSVND 46          
BLAST of mRNA_H-paniculata_contig1419.2542.1 vs. uniprot
Match: UPI000740423C (E3 ubiquitin ligase BIG BROTHER-related-like n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=UPI000740423C)

HSP 1 Score: 72.0 bits (175), Expect = 9.790e-13
Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 0
Query:    9 DYQQLLALDDHNHSSSGARVKPKGLSTSEISMLPTQTGN---GSGDTEQCCICMDDMKPKQSITRLPACLHTFHSNCIKKWLREQASCPIDKVTVSV 102
            +Y+ +LA +DH     GA V    LS  EI  LPT+  N    +G TE C IC  D +  + +  LP CLH +H+ CI +WL+E ASCP+ +V V++
Sbjct:  217 NYEAILAFEDHQ----GAVVSKPKLSKREIERLPTKPFNPAYSAGKTE-CQICFSDYREGEQLRVLP-CLHDYHAKCIDRWLKENASCPVCRVDVTI 307          
BLAST of mRNA_H-paniculata_contig1419.2542.1 vs. uniprot
Match: UPI001F072014 (uncharacterized protein LOC124477157 isoform X1 n=4 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F072014)

HSP 1 Score: 70.1 bits (170), Expect = 7.840e-12
Identity = 39/95 (41.05%), Postives = 52/95 (54.74%), Query Frame = 0
Query:    9 DYQQLLALDDHNHSSSGARVKPKGLSTSEISMLPTQTGNG--SGDTEQCCICMDDMKPKQSITRLPACLHTFHSNCIKKWLREQASCPIDKVTVS 101
            +Y+ LLA ++H     GA V    LS  E+  LPT+T N   S    QC IC  D    + +  LP CLH +H  CI +WL+E A+CPI +  VS
Sbjct:  411 NYEALLAFEEHQ----GAVVAKSSLSKRELESLPTKTYNPAHSAGKTQCQICFSDYTEGEELRMLP-CLHDYHVQCIDRWLKESATCPICRADVS 500          
BLAST of mRNA_H-paniculata_contig1419.2542.1 vs. uniprot
Match: K1Q030_CRAGI (RING finger protein 38 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1Q030_CRAGI)

HSP 1 Score: 70.1 bits (170), Expect = 8.200e-12
Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 0
Query:    2 SRNLTPADYQQLLALDDHNHSSSGARVKPKGLSTSEISMLPTQTGNGSGDTEQCCICMDDMKPKQSITRLPACLHTFHSNCIKKWLREQASCPIDKVTVSV 102
            SR  +  DY+ LL++ +         VKPKG+S+ ++++LP +  + +     C ICM D    + +  LP C H FH  CI+KW+   A+CPI +V V V
Sbjct:  735 SRTFSSNDYEDLLSIAELL-----GDVKPKGISSEDVTLLPEKKFHPNNKMTSCSICMSDYTLNERLKILP-CFHEFHGECIEKWIVTNATCPICRVEVKV 829          
BLAST of mRNA_H-paniculata_contig1419.2542.1 vs. uniprot
Match: UPI000C1D6A51 (RING-H2 finger protein ATL66 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D6A51)

HSP 1 Score: 66.2 bits (160), Expect = 1.790e-11
Identity = 29/82 (35.37%), Postives = 45/82 (54.88%), Query Frame = 0
Query:   21 HSSSGARVKPKGLSTSEISMLPTQTGNGSGDTEQCCICMDDMKPKQSITRLPACLHTFHSNCIKKWLREQASCPIDKVTVSV 102
            HS+  + + P+GL    I+ LPT    G+    +CCIC+       ++  LP C H+FH  C+ KWL  Q+SCP+ +  + V
Sbjct:   69 HSAHPSPLTPQGLDAVTINNLPTVLCKGNSTESECCICLGTFLDGDTVRVLPHCDHSFHLECVDKWLTTQSSCPLCRACLRV 150          
BLAST of mRNA_H-paniculata_contig1419.2542.1 vs. uniprot
Match: A0A1Z5JU57_FISSO (RING-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU57_FISSO)

HSP 1 Score: 67.8 bits (164), Expect = 2.540e-11
Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 0
Query:    3 RNLTPADYQQLLALDDHNHSSSGARVKPKGLSTSEISMLPTQTGNGSGDT--------EQCCICMDDMKPKQSITRLPACLHTFHSNCIKKWLREQASCPIDK 97
            R++T  DY  LL  ++    + GA +   G S  EI  LP++T   + D          +C IC+++ +  + I  +P CLH+FHSNCI +WL ++A CPI K
Sbjct:  162 RDMTGEDYDSLLQFNEEAGPAVGALLNQMGASPEEIRRLPSRTLTPTDDILKSMDHHQSRCAICLENYQIGELIRTVP-CLHSFHSNCIDRWLADRALCPICK 263          
BLAST of mRNA_H-paniculata_contig1419.2542.1 vs. uniprot
Match: A0A0P7VC93_SCLFO (RING-type domain-containing protein (Fragment) n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7VC93_SCLFO)

HSP 1 Score: 67.4 bits (163), Expect = 6.050e-11
Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 0
Query:    9 DYQQLLALDDHNHSSSGARVKPKGLSTSEISMLPTQTGN---GSGDTEQCCICMDDMKPKQSITRLPACLHTFHSNCIKKWLREQASCPIDKVTVS 101
            +Y+ LLA ++    S GA V  K +S+ EI  LP +  N    +G TE C IC  D    + +  LP CLH +H  CI +WL+E A+CP+ +V VS
Sbjct:  267 NYEALLAFEE----SQGAVVARKAMSSREIERLPVKAFNPIHSAGKTE-CQICFSDYVEGEKLRMLP-CLHDYHMQCIDRWLKENATCPVCRVDVS 356          
BLAST of mRNA_H-paniculata_contig1419.2542.1 vs. uniprot
Match: A0A8C9QY86_SCLFO (Uncharacterized LOC108931342 n=3 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9QY86_SCLFO)

HSP 1 Score: 67.4 bits (163), Expect = 6.990e-11
Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 0
Query:    9 DYQQLLALDDHNHSSSGARVKPKGLSTSEISMLPTQTGN---GSGDTEQCCICMDDMKPKQSITRLPACLHTFHSNCIKKWLREQASCPIDKVTVS 101
            +Y+ LLA ++    S GA V  K +S+ EI  LP +  N    +G TE C IC  D    + +  LP CLH +H  CI +WL+E A+CP+ +V VS
Sbjct:  445 NYEALLAFEE----SQGAVVARKAMSSREIERLPVKAFNPIHSAGKTE-CQICFSDYVEGEKLRMLP-CLHDYHMQCIDRWLKENATCPVCRVDVS 534          
BLAST of mRNA_H-paniculata_contig1419.2542.1 vs. uniprot
Match: A0A1S3JL49_LINUN (E3 ubiquitin-protein ligase Arkadia isoform X2 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JL49_LINUN)

HSP 1 Score: 67.4 bits (163), Expect = 7.320e-11
Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 0
Query:    9 DYQQLLALDDHNHSSSGARVKPKGLSTSEISMLPTQTGNGSGDTEQ--CCICMDDMKPKQSITRLPACLHTFHSNCIKKWLREQASCPIDKVTVSV 102
            DY++LL L +         VK +GLST EIS LPT++ + + + EQ  C ICM D    +++ R+  C H FH+ CI +W+++  +CP+ +V V +
Sbjct:  911 DYEELLDLAERL-----GDVKKRGLSTEEISCLPTKSYSKTDEVEQRECHICMCDYTDGENL-RILTCFHEFHAPCIDRWIKDNPTCPVCRVEVQL 1000          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1419.2542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDI2_9PHAE8.540e-3767.65RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FI15_ECTSI1.340e-1873.91zf-rbx1 domain-containing protein n=1 Tax=Ectocarp... [more]
UPI000740423C9.790e-1341.24E3 ubiquitin ligase BIG BROTHER-related-like n=1 T... [more]
UPI001F0720147.840e-1241.05uncharacterized protein LOC124477157 isoform X1 n=... [more]
K1Q030_CRAGI8.200e-1235.64RING finger protein 38 n=3 Tax=Crassostrea gigas T... [more]
UPI000C1D6A511.790e-1135.37RING-H2 finger protein ATL66 n=1 Tax=Olea europaea... [more]
A0A1Z5JU57_FISSO2.540e-1135.92RING-type domain-containing protein n=1 Tax=Fistul... [more]
A0A0P7VC93_SCLFO6.050e-1140.63RING-type domain-containing protein (Fragment) n=1... [more]
A0A8C9QY86_SCLFO6.990e-1140.63Uncharacterized LOC108931342 n=3 Tax=Scleropages f... [more]
A0A1S3JL49_LINUN7.320e-1137.50E3 ubiquitin-protein ligase Arkadia isoform X2 n=2... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 55..96
e-value: 2.2E-6
score: 37.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 54..95
e-value: 5.8E-12
score: 45.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 55..97
score: 11.811
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 17..102
e-value: 2.6E-18
score: 67.4
NoneNo IPR availablePANTHERPTHR45931:SF8coord: 3..101
NoneNo IPR availablePANTHERPTHR45931FAMILY NOT NAMEDcoord: 3..101
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 54..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1419contigH-paniculata_contig1419:2629..6547 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1419.2542.1mRNA_H-paniculata_contig1419.2542.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1419 1812..6558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1419.2542.1 ID=prot_H-paniculata_contig1419.2542.1|Name=mRNA_H-paniculata_contig1419.2542.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
MSRNLTPADYQQLLALDDHNHSSSGARVKPKGLSTSEISMLPTQTGNGSG
DTEQCCICMDDMKPKQSITRLPACLHTFHSNCIKKWLREQASCPIDKVTV
SVTD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD