prot_H-paniculata_contig14181.2539.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14181.2539.1
Unique Nameprot_H-paniculata_contig14181.2539.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length174
Homology
BLAST of mRNA_H-paniculata_contig14181.2539.1 vs. uniprot
Match: D8LRE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRE0_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 1.660e-79
Identity = 127/173 (73.41%), Postives = 142/173 (82.08%), Query Frame = 0
Query:    1 MSEEAKTGEVMVQMHSSMANKHADTMPAVSKFDQSADPIPKVVPPRGSKDARSFRPSTLAEINLMKQYKPLTMTCGSKTIGIGCGNSLEDLLLIMGCVLALWSFVLGLSALLLKSAIDTDRNHTALWAYFWLFVLSVLLLGGMIATGQVERARAEAIQAKKQAEEDEAQAMAA 173
            MSEEAKT EV V M    A+ HADT   VSKFDQS +PIPKVVPPRGSKDARSFRPSTLAEIN+M +Y+PL + CG KT GIGCGNSLED+LLIMGC+LALWSFVLG+S LLLKSAIDTD  HTALW YFWLF+L   LLGGMIATGQVER R+E   A+KQ ++D A AM+A
Sbjct:    1 MSEEAKTNEVAVSMPK--ADIHADTQQEVSKFDQSKNPIPKVVPPRGSKDARSFRPSTLAEINMMNRYEPLELKCGGKTFGIGCGNSLEDVLLIMGCILALWSFVLGVSGLLLKSAIDTDLRHTALWVYFWLFILGCFLLGGMIATGQVERFRSERAAAEKQHDDDAAAAMSA 171          
BLAST of mRNA_H-paniculata_contig14181.2539.1 vs. uniprot
Match: A0A6U1XJS9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1XJS9_TRICV)

HSP 1 Score: 88.6 bits (218), Expect = 3.340e-19
Identity = 48/107 (44.86%), Postives = 69/107 (64.49%), Query Frame = 0
Query:   48 SKDARSFRPSTLAEINLMKQYKPLTMTCGSKTIG------IGCGNSLEDLLLIMGCVLALWSFVLGLSALLLKSAIDTDRNHTALWAYFWLFVLSVLLLGGMIATGQ 148
            ++D+RSFRPS+LA    M  Y+PL ++  +K  G      IGCG+S EDL LI  C  AL+SF++G+ AL+L+ A+DTD  HT LWA+  + VL V  + G +  G+
Sbjct:   22 TQDSRSFRPSSLAGTKGMNSYRPLVISY-TKADGSPGHCAIGCGHSAEDLALIFACYAALYSFLIGMFALMLRGALDTDDTHTLLWAFLVIGVLFVSFVSGAVYVGR 127          
BLAST of mRNA_H-paniculata_contig14181.2539.1 vs. uniprot
Match: A0A6V1NIL0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NIL0_HETAK)

HSP 1 Score: 82.0 bits (201), Expect = 2.260e-16
Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 0
Query:   67 QYKPLT--------MTCGSKT-------IGIGCGNSLEDLLLIMGCVLALWSFVLGLSALLLKSAIDTDRNHTALWAYFWLFVLSVLLLGGMIATGQVERARAEAIQAKKQAEEDE 167
            QYKPL         M C +K        I IGCGN+ EDL++I   +  LW  +LG   LLLK+ ID+  + T LW YF+  ++ V+++GG + TGQ+ERAR+E    KK AEE E
Sbjct:   64 QYKPLIIEVKNNPCMCCPAKCGCTKECIIPIGCGNTFEDLVIIFSLLGTLWCGLLGFYTLLLKAQIDSTEHSTVLWIYFFSGIIFVIMVGGSVYTGQIERARSE----KKAAEEAE 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14181.2539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRE0_ECTSI1.660e-7973.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U1XJS9_TRICV3.340e-1944.86Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6V1NIL0_HETAK2.260e-1643.10Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 149..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..145
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 146..173
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 91..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14181contigH-paniculata_contig14181:4666..5187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14181.2539.1mRNA_H-paniculata_contig14181.2539.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14181 3293..5187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14181.2539.1 ID=prot_H-paniculata_contig14181.2539.1|Name=mRNA_H-paniculata_contig14181.2539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp
MSEEAKTGEVMVQMHSSMANKHADTMPAVSKFDQSADPIPKVVPPRGSKD
ARSFRPSTLAEINLMKQYKPLTMTCGSKTIGIGCGNSLEDLLLIMGCVLA
LWSFVLGLSALLLKSAIDTDRNHTALWAYFWLFVLSVLLLGGMIATGQVE
RARAEAIQAKKQAEEDEAQAMAA*
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