prot_H-paniculata_contig1414.2523.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1414.2523.1
Unique Nameprot_H-paniculata_contig1414.2523.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length404
Homology
BLAST of mRNA_H-paniculata_contig1414.2523.1 vs. uniprot
Match: D7FPW9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPW9_ECTSI)

HSP 1 Score: 471 bits (1213), Expect = 2.390e-162
Identity = 240/325 (73.85%), Postives = 269/325 (82.77%), Query Frame = 0
Query:   80 SYKRFMWKRRARRAMKYVSMPIVSVPGQPREQLMLALTFPAANKTINFIVDSLRRTTMVKPSTRDALGVGGVTCEDWSNSFGECVELPAARIGNERGDHFLLVTDAIVANKEQENVLGPNTGGVLGLDFCNTYDLDLNFETNEARVYASGAVDQRLVDTTGLEELSCGYLPGGKLGIKMELNGGGPFTAVLDLASNSTAGNWAAARDLDVTSMAQGQSSSYPPETGRSRPLMCAQFDTIQLGHVLLTSMVNATTARQGRLAVYVGHLLEFDRIAEDISNR-PQGRQLALVGQDLIAHSRIVLSCRSKRLFFAPLEANDVWAGQIV 403
            +Y +  W+RRA RAMKYVSMPIV + GQPREQ+M+A+ FPAAN T++F  D+LRRTT++ P+ +DALGV           FG CVELPAARIG+E GDH+LLV DA+VAN EQ  VLGPNTGGVLGLDF N YDLDLNFETNEAR Y +GAVDQ LVDT+ LE L CG LPGGKL IKMELNGGGPFT VLDLAS++T GNW AARDLDVTSMA GQSSSYP ETGRS PLMCAQFDTIQLGHVLL S+V+A TA +GRLAVYVGHL  FD IA DIS R P+ RQLALVGQDLI H+RIVLSCRSKRL+FAPLEAND+WAGQ+V
Sbjct:   99 NYNKDAWQRRASRAMKYVSMPIVKMAGQPREQIMIAMPFPAANATVHFSFDTLRRTTLITPTAKDALGVLEGPGIGGQPDFGACVELPAARIGHEHGDHYLLVMDAVVANSEQVKVLGPNTGGVLGLDFLNRYDLDLNFETNEARFYVAGAVDQGLVDTSLLEGLKCGSLPGGKLAIKMELNGGGPFTGVLDLASSTTVGNWLAARDLDVTSMASGQSSSYPQETGRSLPLMCAQFDTIQLGHVLLASVVDAKTASEGRLAVYVGHLPVFDSIARDISIREPRSRQLALVGQDLIGHTRIVLSCRSKRLYFAPLEANDIWAGQVV 423          
BLAST of mRNA_H-paniculata_contig1414.2523.1 vs. uniprot
Match: A0A835ZPQ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPQ0_9STRA)

HSP 1 Score: 301 bits (771), Expect = 4.080e-96
Identity = 160/317 (50.47%), Postives = 210/317 (66.25%), Query Frame = 0
Query:   92 RAMKYVSMPIVSVPGQPREQLMLALTFPAANKTINFIVDSLRRTTMVKPSTRDALGVGG-----VTCEDWSNSFGECVELPAARIGNERGDHFLLVTDAIVANKEQENVLGPNTGGVLGLDFCNTYDLDLNFETNEARVYASGAVDQRLVDTTGLEELSCGYLPGGKLGIKMELNGGGPFTAVLDLASNSTAGNWAAARDLDVTSMAQGQSSSYPPETGRSRPLMCAQFDTIQLGHVLLTSMVNATTARQGRLAVYVGHLLEFDRIAEDI-SNRPQGRQLALVGQDLIAHSRIVLSCRSKRLFFAPLEANDVWAGQI 402
            +A+   S+P+     QP+EQL++ L FPAAN T+NFI+D++ + T++ P  RD LG+G      V    +  + G  V LPAARIG     HF  + DA+V + E+         GVL L F   YDLD+     +  VY  GAVD  +++T GLEE+ C  LPGGKLG+KMELNGGG FT VLD+ SNS+ GNWAAARDLDV+ +    +S YP ETGR RPL  A FDT+Q+GHVLL+++ +A T  QGRL++YVG+L EFD + EDI   R   RQLALVG DL+ ++RIV+S +SKR+FF   E NDVWAGQ+
Sbjct:   54 KAISCASVPLRKHANQPKEQLVMPLDFPAANVTLNFIIDTVSQDTLISPRARDLLGIGADEGAEVRVGLFHATRGRQVTLPAARIGRADRPHFFTICDAVVVDTERMQ-FSSAVDGVLALAFLANYDLDIQMNAGKVDVYLQGAVDSGMLNTEGLEEVRCNTLPGGKLGVKMELNGGGVFTGVLDMGSNSSVGNWAAARDLDVSELFLQDASRYPQETGRLRPLFKACFDTVQVGHVLLSNVPDAQTDAQGRLSMYVGYLPEFDLLQEDIRGTRDPARQLALVGLDLLGNTRIVISVKSKRIFFKAKELNDVWAGQV 369          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1414.2523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPW9_ECTSI2.390e-16273.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZPQ0_9STRA4.080e-9650.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..403
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1414contigH-paniculata_contig1414:1859..16048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1414.2523.1mRNA_H-paniculata_contig1414.2523.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1414 1830..16405 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1414.2523.1 ID=prot_H-paniculata_contig1414.2523.1|Name=mRNA_H-paniculata_contig1414.2523.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=404bp
MRWRASSLAVDCLLASAMKAHSSFVTGPRCCCSSARPKTTPTPPRSCCPV
GLRTSSPRRLWRQRVISATQMSDTPGADDSYKRFMWKRRARRAMKYVSMP
IVSVPGQPREQLMLALTFPAANKTINFIVDSLRRTTMVKPSTRDALGVGG
VTCEDWSNSFGECVELPAARIGNERGDHFLLVTDAIVANKEQENVLGPNT
GGVLGLDFCNTYDLDLNFETNEARVYASGAVDQRLVDTTGLEELSCGYLP
GGKLGIKMELNGGGPFTAVLDLASNSTAGNWAAARDLDVTSMAQGQSSSY
PPETGRSRPLMCAQFDTIQLGHVLLTSMVNATTARQGRLAVYVGHLLEFD
RIAEDISNRPQGRQLALVGQDLIAHSRIVLSCRSKRLFFAPLEANDVWAG
QIV*
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