prot_H-paniculata_contig14126.2518.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14126.2518.1
Unique Nameprot_H-paniculata_contig14126.2518.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length119
Homology
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BLAST of mRNA_H-paniculata_contig14126.2518.1 vs. uniprot
Match: A0A6H5L089_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L089_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.580e-10
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = 0 
Query:    1 LTESIINETVLTKVYMTKSPSEGWRIINHWFLPRSLGEIEKWSEEHEDVNMQKGEDPMRYLVRVDEIVGVLATLGEPKSERMVVKKIRKELTSDYEIERRTIL 103
            L ES     +   ++      E W  I  W LP +  E      + E V M  GE+P  +  RVD IV  +  +G  KSER +V+ I ++L+SDY++ER+T L
Sbjct:  451 LVESTSGSDIEETLFACSCVPEAWTAIREWSLPTTDAEQRLLERQLETVEMSPGENPKLFFARVDGIVNTMRAVGIEKSERQIVQTIVRQLSSDYDVERKTTL 553
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14126.2518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L089_9PHAE1.580e-1034.95Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 6..112
e-value: 1.0E-7
score: 31.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14126contigH-paniculata_contig14126:1374..1730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14126.2518.1mRNA_H-paniculata_contig14126.2518.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14126 1374..1730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14126.2518.1 ID=prot_H-paniculata_contig14126.2518.1|Name=mRNA_H-paniculata_contig14126.2518.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp
LTESIINETVLTKVYMTKSPSEGWRIINHWFLPRSLGEIEKWSEEHEDVN
MQKGEDPMRYLVRVDEIVGVLATLGEPKSERMVVKKIRKELTSDYEIERR
TILQRQDVSTVELEETVRS
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