prot_H-paniculata_contig1408.2494.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1408.2494.1
Unique Nameprot_H-paniculata_contig1408.2494.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length97
Homology
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BLAST of mRNA_H-paniculata_contig1408.2494.1 vs. uniprot
Match: D7G2N5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2N5_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 1.380e-36
Identity = 66/97 (68.04%), Postives = 80/97 (82.47%), Query Frame = 0 
Query:    3 LRRFFGELSAH--ADRH-RRLNVEKEIEDMPFEEALAITVVCFLLIAVALSSVYTMCKTRRIREGKGYQEVQRPENAFEMMSLGGREGVSMVLPQGY 96
            L++F G+LSA   + RH RRL    E+E++ +EEALAI++VCFLL  VA SSVY+MCK RR REG GY+EVQRPEN+FEMMSLGGR+GVSMVLPQGY
Sbjct:    4 LKQFLGDLSARTVSVRHQRRLTFASEVEELEYEEALAISLVCFLLSMVAFSSVYSMCKARRAREGMGYREVQRPENSFEMMSLGGRDGVSMVLPQGY 100
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1408.2494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2N5_ECTSI1.380e-3668.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availableTMHMMTMhelixcoord: 34..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1408contigH-paniculata_contig1408:17988..25095 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1408.2494.1mRNA_H-paniculata_contig1408.2494.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1408 17242..25355 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1408.2494.1 ID=prot_H-paniculata_contig1408.2494.1|Name=mRNA_H-paniculata_contig1408.2494.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
MGLRRFFGELSAHADRHRRLNVEKEIEDMPFEEALAITVVCFLLIAVALS
SVYTMCKTRRIREGKGYQEVQRPENAFEMMSLGGREGVSMVLPQGY*
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