prot_H-paniculata_contig14060.2484.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14060.2484.1
Unique Nameprot_H-paniculata_contig14060.2484.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1025
Homology
BLAST of mRNA_H-paniculata_contig14060.2484.1 vs. uniprot
Match: A0A6H5JQB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQB1_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 2.940e-25
Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 0
Query:    1 MPSQLTWEFLEKVVTGSGWSLSEVESLVLEREEISHIEQDLFLGMERLMYLSLSYNRLSTLQGIEDLSCLVSGIFRSNQLSSFREVDRLARLPNLRDLDLRDNPVVTSAPSLPGGG---ERGRRNPRDRVLETLPKLLRLDGVAVSDSER 147
            MPS LT  FLEKVV GSGWSL+EVESL LE E I  +   L  G+ RL+YL+L+ N LS+L GIE L  L + + R N++ S  EV RL+ L +LR+LDLR NPV+ +A    GGG   +RG  +PR  V+  LP+L+ LDG  V + ER
Sbjct:  159 MPSDLTRAFLEKVVRGSGWSLAEVESLSLEGEGIRSLRGSLG-GLRRLVYLNLARNILSSLLGIEHLVSLGTLVLRENRVESIDEVGRLSCLGDLRNLDLRRNPVMETASRRHGGGRSGDRGSGSPRADVVAVLPQLVTLDGRGVREDER 307          
BLAST of mRNA_H-paniculata_contig14060.2484.1 vs. uniprot
Match: D7FTU9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU9_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 4.280e-23
Identity = 73/150 (48.67%), Postives = 94/150 (62.67%), Query Frame = 0
Query:    1 MPSQLTWEFLEKVVTGSGWSLSEVESLVLEREEISHIEQDLFLGMERLMYLSLSYNRLSTLQGIEDLSCLVSGIFRSNQLSSFREVDRLARLPNLRDLDLRDNPVVTSAPSLPGGGERGRRN---PRDRVLETLPKLLRLDGVAVSDSER 147
            M   LT  FLE+VV GSGWSL+EVESL LE E I  +   L  G+ RL+YL+L+ N LS+L GIE L  L + + R N++ S  EV RL+ L +LRDLD+R NPV+ +A    GGG  G      PR  V+  LP+L+ LDG  V + ER
Sbjct:    1 MSGDLTRAFLEEVVRGSGWSLAEVESLSLEGEGIRSLRGSLG-GLRRLVYLNLARNNLSSLLGIEHLVSLGTLVLRENRVESIDEVGRLSCLGDLRDLDIRLNPVMATASRRHGGGRSGGSGSGRPRADVVAVLPQLVTLDGRGVREDER 149          
BLAST of mRNA_H-paniculata_contig14060.2484.1 vs. uniprot
Match: A0A4W3J0U9_CALMI (Uncharacterized protein n=2 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3J0U9_CALMI)

HSP 1 Score: 68.6 bits (166), Expect = 4.990e-8
Identity = 54/142 (38.03%), Postives = 69/142 (48.59%), Query Frame = 0
Query:   23 EVESLVLEREEISHIEQ--DLFLGMERLMYLSLSYNRLSTLQGIEDLSCLVSGIFRSNQLSSFREVDRLARLPNLRDLDLRDNPVVTSAPSLPGGGERGRRNPRDRVLETLPKLLRLDGVAVSDSERACSHRVVSEIGQRDA 162
            EVESL L+      I    D F   +RL  L LS N + +L G+E L  L       N ++S +E+ RL  L NLR+LDLR NPV            R   N R  V+  LP L RLD   V +SER  +H+  S   Q+ A
Sbjct:   26 EVESLSLQGTYSDKIVSLGDAFQNFKRLKCLDLSRNSIDSLGGLEYLPSLEKLNMYYNNVASSKEISRLCYLTNLRELDLRLNPVT-----------RNEDNFRLFVVHMLPNLQRLDDRLVRESERKAAHQHFSSQEQKQA 156          
BLAST of mRNA_H-paniculata_contig14060.2484.1 vs. uniprot
Match: A0A401S9H2_CHIPU (LRRcap domain-containing protein n=6 Tax=Orectolobiformes TaxID=30503 RepID=A0A401S9H2_CHIPU)

HSP 1 Score: 68.6 bits (166), Expect = 5.620e-8
Identity = 57/177 (32.20%), Postives = 83/177 (46.89%), Query Frame = 0
Query:    4 QLTWEFLEKVVTGSGWSLSEVESLVLEREEISHIEQ--DLFLGMERLMYLSLSYNRLSTLQGIEDLSCLVSGIFRSNQLSSFREVDRLARLPNLRDLDLRDNPVVTSAPSLPGGGERGRRNPRDRVLETLPKLLRLDGVAVSDSER-ACSHRVVSEIGQRDADNDGVIDLAVSRRSY 177
            + T E++      +   L EVE L L+      I    D FL  +RL  L LS N + +L G+E+L  L       N + S +E+  L  L NL++LDLR NPV            R   N R  V+  LP L +LD   V DSER A  +  VS   + +AD D   + +  ++++
Sbjct:    7 EATEEWIRDKAQLNNQRLDEVEFLSLQGTYSDKIVSLGDAFLNFKRLKSLDLSRNSIVSLGGLENLHLLEKLNLYYNNVPSSKEISSLRHLTNLKELDLRLNPVT-----------RNEENYRLYVIHLLPNLKKLDDRPVRDSERKAAQNHFVSREHKEEADLDREEERSYVKKNF 172          
BLAST of mRNA_H-paniculata_contig14060.2484.1 vs. uniprot
Match: A0A4W3ICF8_CALMI (Uncharacterized protein n=2 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3ICF8_CALMI)

HSP 1 Score: 68.6 bits (166), Expect = 5.750e-8
Identity = 54/142 (38.03%), Postives = 69/142 (48.59%), Query Frame = 0
Query:   23 EVESLVLEREEISHIEQ--DLFLGMERLMYLSLSYNRLSTLQGIEDLSCLVSGIFRSNQLSSFREVDRLARLPNLRDLDLRDNPVVTSAPSLPGGGERGRRNPRDRVLETLPKLLRLDGVAVSDSERACSHRVVSEIGQRDA 162
            EVESL L+      I    D F   +RL  L LS N + +L G+E L  L       N ++S +E+ RL  L NLR+LDLR NPV            R   N R  V+  LP L RLD   V +SER  +H+  S   Q+ A
Sbjct:   26 EVESLSLQGTYSDKIVSLGDAFQNFKRLKCLDLSRNSIDSLGGLEYLPSLEKLNMYYNNVASSKEISRLCYLTNLRELDLRLNPVT-----------RNEDNFRLFVVHMLPNLQRLDDRLVRESERKAAHQHFSSQEQKQA 156          
BLAST of mRNA_H-paniculata_contig14060.2484.1 vs. uniprot
Match: A0A671DQ80_RHIFE (Centrosomal protein 72 n=5 Tax=Rhinolophus TaxID=49442 RepID=A0A671DQ80_RHIFE)

HSP 1 Score: 68.2 bits (165), Expect = 6.390e-8
Identity = 54/145 (37.24%), Postives = 74/145 (51.03%), Query Frame = 0
Query:   21 LSEVESLVLE---REEISHIEQDLFLGMERLMYLSLSYNRLSTLQGIEDLSCLVSGIFRSNQLSSFREVDRLARLPNLRDLDLRDNPVVTSAPSLPGGGERGRRNPRDRVLETLPKLLRLDGVAVSDSERACSHRVVSEIGQRDA 162
            L+E+ SL +    +E+I+H+   L + +  L  L LS N L +L+GI+ L  L       N +SS  EV RL  LP LRD+DLR NPVV + P             R  V+  LPKL +LD   V +SER  S    +  G  D+
Sbjct:   27 LAELRSLSIPGTYQEKITHLGNSL-MNLTGLKSLDLSRNSLVSLEGIQHLIALERLSLYHNCVSSLAEVLRLRSLPELRDVDLRLNPVVKNEPGY-----------RHFVVHALPKLRQLDDRPVRESEREASWLHFASEGSLDS 159          
BLAST of mRNA_H-paniculata_contig14060.2484.1 vs. uniprot
Match: A0A8D0BV34_9SAUR (Centrosomal protein 72 n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BV34_9SAUR)

HSP 1 Score: 67.8 bits (164), Expect = 7.490e-8
Identity = 53/130 (40.77%), Postives = 68/130 (52.31%), Query Frame = 0
Query:   21 LSEVESLVLE---REEISHIEQDLFLGMERLMYLSLSYNRLSTLQGIEDLSCLVSGIFRSNQLSSFREVDRLARLPNLRDLDLRDNPVVTSAPSLPGGGERGRRNPRDRVLETLPKLLRLDGVAVSDSER 147
            L++V SL L     E+ISH+   L     RL  L LS N L+TL+G++ L+CL       N +SS  EV RL  L  L+D+DLR NPVV           +   + R  V+  LP L RLD   V DSER
Sbjct:   24 LADVRSLSLPGTYHEKISHLGNAL-KNFTRLKSLDLSRNALTTLEGLQHLTCLEKLNLYFNHISSLSEVFRLHSLTALKDVDLRLNPVV-----------KNESDYRLFVIHMLPNLRRLDDRPVRDSER 141          
BLAST of mRNA_H-paniculata_contig14060.2484.1 vs. uniprot
Match: A0A8B7PTX4_HIPAR (centrosomal protein of 72 kDa isoform X1 n=4 Tax=Hipposideros armiger TaxID=186990 RepID=A0A8B7PTX4_HIPAR)

HSP 1 Score: 67.8 bits (164), Expect = 8.630e-8
Identity = 59/159 (37.11%), Postives = 80/159 (50.31%), Query Frame = 0
Query:   11 EKVVTGSGWS----LSEVESLVLE---REEISHIEQDLFLGMERLMYLSLSYNRLSTLQGIEDLSCLVSGIFRSNQLSSFREVDRLARLPNLRDLDLRDNPVVTSAPSLPGGGERGRRNPRDRVLETLPKLLRLDGVAVSDSERACSHRVVSEIGQRDA 162
            EK+   SG +    L+E+ SL +    +E+I+H+   L + +  L  L LS N L +L+GI+ L+ L       N +SS  EV RL  LP LRD+DLR NPVV + P             R  VL  LPKL +LD   V  SER  S    +  G  D+
Sbjct:   13 EKIREKSGLAPHRDLAELRSLSIPGTYQEKITHLGNSL-MNLTGLKSLDLSRNSLVSLEGIQHLASLERLSLYHNCVSSLAEVLRLRSLPELRDVDLRLNPVVKNQPGY-----------RLVVLHALPKLRQLDDRPVRASEREASWLHFASEGSLDS 159          
BLAST of mRNA_H-paniculata_contig14060.2484.1 vs. uniprot
Match: A2GBB8_TRIVA (Leucine Rich Repeat family protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2GBB8_TRIVA)

HSP 1 Score: 65.1 bits (157), Expect = 1.010e-7
Identity = 48/130 (36.92%), Postives = 73/130 (56.15%), Query Frame = 0
Query:   20 SLSEVESLVL---EREEISHIEQDLFLGMERLMYLSLSYNRLSTLQGIEDLSCLVSGIFRSNQLSSFREVDRLARLPNLRDLDLRDNPVVTSAPSLPGGGERGRRNPRDRVLETLPKLLRLDGVAVSDSE 146
            SL++V +L +   E  ++S +E+     M  +  +SLS N+++TL+   +   L +   R NQ+S   E++ LARLPNLR L LRDNPV      LP        N R  V +TLP+L +LD + +S S+
Sbjct:   23 SLADVRTLNMWGFELTDVSIVEK-----MPNVETISLSLNQITTLKPFGNCYSLKNLYLRQNQISDLSEINYLARLPNLRALMLRDNPVS----ELP--------NYRQYVAKTLPRLEKLDDIDISSSD 135          
BLAST of mRNA_H-paniculata_contig14060.2484.1 vs. uniprot
Match: H2XWG8_CIOIN (Uncharacterized protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=H2XWG8_CIOIN)

HSP 1 Score: 67.0 bits (162), Expect = 1.410e-7
Identity = 57/187 (30.48%), Postives = 91/187 (48.66%), Query Frame = 0
Query:    1 MPSQLTWEFLEKVVTGSGWSLSEVESLVLE---REEISHIEQDLFLGMERLMYLSLSYNRLSTLQGIEDLSCLVSGIFRSNQLSSFREVDRLARLPNLRDLDLRDNPVVTSAPSLPGGGERGRRNPRDRVLETLPKLLRLDGVAVSDSERACSHRVVSEIGQRDADNDGVIDLAVSR-RSYKLRCPR 183
            M  ++T +++++ +     +L +V+SL L     E+I+ +   L     R+ +L LS N L TL+GIE LS L       N+++  +E+ RL +  NLRD+DLR NPV  + P             R  +   LP L RLD   V DSER  +    +  G+    +D +   + ++    K R PR
Sbjct:    1 MELEITEDWIKERIKLDHDNLDDVKSLALPGTYHEKITRLGFSL-QNFTRIQHLDLSKNNLITLKGIEHLSVLEQLNLYYNKINDLKEIFRLRKNQNLRDIDLRLNPVTGNEPDY-----------RLFIAHMLPLLRRLDDRPVRDSERRAAMMHFANEGEGMFGDDSIAPPSETKSEKQKSRQPR 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14060.2484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQB1_9PHAE2.940e-2551.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTU9_ECTSI4.280e-2348.67Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A4W3J0U9_CALMI4.990e-838.03Uncharacterized protein n=2 Tax=Callorhinchus mili... [more]
A0A401S9H2_CHIPU5.620e-832.20LRRcap domain-containing protein n=6 Tax=Orectolob... [more]
A0A4W3ICF8_CALMI5.750e-838.03Uncharacterized protein n=2 Tax=Callorhinchus mili... [more]
A0A671DQ80_RHIFE6.390e-837.24Centrosomal protein 72 n=5 Tax=Rhinolophus TaxID=4... [more]
A0A8D0BV34_9SAUR7.490e-840.77Centrosomal protein 72 n=1 Tax=Salvator merianae T... [more]
A0A8B7PTX4_HIPAR8.630e-837.11centrosomal protein of 72 kDa isoform X1 n=4 Tax=H... [more]
A2GBB8_TRIVA1.010e-736.92Leucine Rich Repeat family protein n=1 Tax=Trichom... [more]
H2XWG8_CIOIN1.410e-730.48Uncharacterized protein n=2 Tax=Ciona intestinalis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 4..165
e-value: 3.1E-21
score: 77.1
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 23..70
e-value: 7.4E-8
score: 32.0
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 94..116
score: 5.279
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 47..68
score: 8.028
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 23..44
score: 4.585
NoneNo IPR availablePANTHERPTHR18849LEUCINE RICH REPEAT PROTEINcoord: 18..241
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 20..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14060contigH-paniculata_contig14060:709..4694 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14060.2484.1mRNA_H-paniculata_contig14060.2484.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14060 709..4892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14060.2484.1 ID=prot_H-paniculata_contig14060.2484.1|Name=mRNA_H-paniculata_contig14060.2484.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1025bp
MPSQLTWEFLEKVVTGSGWSLSEVESLVLEREEISHIEQDLFLGMERLMY
LSLSYNRLSTLQGIEDLSCLVSGIFRSNQLSSFREVDRLARLPNLRDLDL
RDNPVVTSAPSLPGGGERGRRNPRDRVLETLPKLLRLDGVAVSDSERACS
HRVVSEIGQRDADNDGVIDLAVSRRSYKLRCPREGANGRVGPTNRRMNAR
GEDFVQKRNADSITTVDERGTESAMEENDDRFRCSAPRPRQSNPRCHDEN
DDGARDGFAFETFFASADDDVPVVVETEAIIRKSTDEVSDYSGRAALAGA
TDREHPRRAKASNVRQECYRTSFSAHGGGVNTDNRKNNDRVTAAVPCRQR
IKHSSTLDVAGGNGEWEGSQASFAASNSSIVRNNNKRDRMGGRARGTQAL
AASTTPAPAPAAQGTRIDDGDEGTAGTRESNSSGGGVGRSRDHHGRDQDK
VQASWTGLRGNLLNYSRLEGNGGSGCGERRRGVVGSDDVSSFYEDGYGEC
WRTRSNHRSGEGSSLVSSSSICVEGEQSGRPTIGEAPPVVAASQAKDDDD
IAVLWEELNASSTNDNNRSCHPRLPQTLQPLAPTATAGGTTTRRRGRGVS
TPTVAGRPRDTDLGRPTHQPPPQESAALTMIPFQEESSDPDNNRLLLMSE
LDDSPSVASKSGGRDMQRHKPVRSGALCALAQEQRPVHQALGESPLHCEN
EYDGSHAECGPAARGHPIPVSSTPVVLQQTIPIDTTTPTLPFAESSTTKN
QQHASVPVAAAAAAAAAAALPPSTPMVYAADTAGVSSHVPYEKKNPAAVE
ALASSVVSSSSTRKSNTSAAAKAVEAFRQSSQRLCLLELEGKTLAAAAPA
PAVASGGFATTNSSLTTAADTVHADKVVINSCAAGQNVKHGGTGGDNRHD
NDRRGDGGAQCQRGDAGRGQQSVVAEVRPTAIVVAASGECREVVAEEAAV
SGVVAPGANVVAPGISCVEIYGPAATVLAQPQAMTVELASSLFISSPAKL
TSSTAGARAPQGSSSLAATSSSSSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt