prot_H-paniculata_contig14028.2463.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14028.2463.1
Unique Nameprot_H-paniculata_contig14028.2463.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length96
Homology
BLAST of mRNA_H-paniculata_contig14028.2463.1 vs. uniprot
Match: D8LPY7_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY7_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 2.840e-31
Identity = 65/87 (74.71%), Postives = 72/87 (82.76%), Query Frame = 0
Query:   10 GSVRKTGRRDPFPNPKKQELKEEPSVKFLMLNPSVHFDEIVKKARAVVLVGGTMQPTGDLVRQLFSSVESSRVDVFSCGHVIPKENL 96
            GSV     R      K  + +EEPSVKFLMLNP+VHFDEIV+KARA+VLVGGTMQPTGDLVRQLFSSVE SRV+VFSCGHVIP+ENL
Sbjct:  735 GSVGGXXXRGATAGQKTTQDEEEPSVKFLMLNPAVHFDEIVQKARALVLVGGTMQPTGDLVRQLFSSVEPSRVEVFSCGHVIPRENL 821          
BLAST of mRNA_H-paniculata_contig14028.2463.1 vs. uniprot
Match: K3W6Y0_GLOUD (Helicase ATP-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6Y0_GLOUD)

HSP 1 Score: 92.0 bits (227), Expect = 1.160e-19
Identity = 37/65 (56.92%), Postives = 54/65 (83.08%), Query Frame = 0
Query:   32 EPSVKFLMLNPSVHFDEIVKKARAVVLVGGTMQPTGDLVRQLFSSVESSRVDVFSCGHVIPKENL 96
            E ++KF+++NP++HF+EIV+KAR+V+L GGTMQP   ++ QLFS +   R+D+FSCGHVIP +NL
Sbjct:  607 EGAIKFILMNPAIHFEEIVEKARSVILAGGTMQPVSQVIDQLFSKIPRDRIDLFSCGHVIPPKNL 671          
BLAST of mRNA_H-paniculata_contig14028.2463.1 vs. uniprot
Match: A0A662X2D8_9STRA (Helicase ATP-binding domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2D8_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.580e-19
Identity = 38/62 (61.29%), Postives = 51/62 (82.26%), Query Frame = 0
Query:   35 VKFLMLNPSVHFDEIVKKARAVVLVGGTMQPTGDLVRQLFSSVESSRVDVFSCGHVIPKENL 96
            +KF++LNP++HF E+V+KAR+V+L GGTMQP   ++ QLF+SV    VD+FSCGHVIP ENL
Sbjct:  600 IKFILLNPAIHFQEVVEKARSVILAGGTMQPVSQVIDQLFASVPREHVDLFSCGHVIPPENL 661          
BLAST of mRNA_H-paniculata_contig14028.2463.1 vs. uniprot
Match: G4YIN4_PHYSP (Helicase ATP-binding domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=G4YIN4_PHYSP)

HSP 1 Score: 91.3 bits (225), Expect = 2.140e-19
Identity = 40/62 (64.52%), Postives = 50/62 (80.65%), Query Frame = 0
Query:   35 VKFLMLNPSVHFDEIVKKARAVVLVGGTMQPTGDLVRQLFSSVESSRVDVFSCGHVIPKENL 96
            V+F++LNP +HF EIVKK+R+V+L GGTMQP   ++ QLFSSV    VD+FSCGHVIP ENL
Sbjct:  522 VRFILLNPVIHFQEIVKKSRSVILAGGTMQPVSQVIDQLFSSVPRESVDLFSCGHVIPPENL 583          
BLAST of mRNA_H-paniculata_contig14028.2463.1 vs. uniprot
Match: W2PPV0_PHYPN (Helicase ATP-binding domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2PPV0_PHYPN)

HSP 1 Score: 90.5 bits (223), Expect = 4.000e-19
Identity = 38/62 (61.29%), Postives = 51/62 (82.26%), Query Frame = 0
Query:   35 VKFLMLNPSVHFDEIVKKARAVVLVGGTMQPTGDLVRQLFSSVESSRVDVFSCGHVIPKENL 96
            ++F++LNP +HF+EIVK++R+V+L GGTMQP   ++ QLFSSV    VD+FSCGHVIP ENL
Sbjct:  559 IRFILLNPVIHFEEIVKESRSVILAGGTMQPVSQVIDQLFSSVPRENVDLFSCGHVIPPENL 620          
BLAST of mRNA_H-paniculata_contig14028.2463.1 vs. uniprot
Match: A0A0P1B2J3_PLAHL (DNA helicase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2J3_PLAHL)

HSP 1 Score: 90.1 bits (222), Expect = 5.460e-19
Identity = 38/63 (60.32%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   34 SVKFLMLNPSVHFDEIVKKARAVVLVGGTMQPTGDLVRQLFSSVESSRVDVFSCGHVIPKENL 96
            S++F +LNP+ HF +IV+KAR+V+L GGTMQP   ++ QLFSSV   ++D+FSCGHVIP ENL
Sbjct:  550 SLRFFLLNPAFHFQDIVQKARSVILAGGTMQPVSQVIEQLFSSVPIEKIDLFSCGHVIPPENL 612          
BLAST of mRNA_H-paniculata_contig14028.2463.1 vs. uniprot
Match: A0A329SYA8_9STRA (Putative ATP-dependent DNA helicase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SYA8_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 5.460e-19
Identity = 38/62 (61.29%), Postives = 50/62 (80.65%), Query Frame = 0
Query:   35 VKFLMLNPSVHFDEIVKKARAVVLVGGTMQPTGDLVRQLFSSVESSRVDVFSCGHVIPKENL 96
            ++F++LNP +HF EIV+K+R+V+L GGTMQP   ++ QLFSSV    VD+FSCGHVIP ENL
Sbjct:  555 IRFILLNPVIHFQEIVEKSRSVILAGGTMQPVSQVIDQLFSSVPKENVDLFSCGHVIPPENL 616          
BLAST of mRNA_H-paniculata_contig14028.2463.1 vs. uniprot
Match: A0A5D6Y0V7_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0V7_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.020e-18
Identity = 38/65 (58.46%), Postives = 52/65 (80.00%), Query Frame = 0
Query:   32 EPSVKFLMLNPSVHFDEIVKKARAVVLVGGTMQPTGDLVRQLFSSVESSRVDVFSCGHVIPKENL 96
            E ++KF+ +NP+VHF+EIV KAR+V+L GGTMQP   ++ QLF  V  +R+D+FSCGHVIP +NL
Sbjct:  600 EGAIKFIQMNPAVHFEEIVAKARSVILAGGTMQPVAQVIDQLFPFVPRARIDLFSCGHVIPPQNL 664          
BLAST of mRNA_H-paniculata_contig14028.2463.1 vs. uniprot
Match: A0A4D9CWW8_9STRA (Helicase ATP-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWW8_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.020e-18
Identity = 50/96 (52.08%), Postives = 63/96 (65.62%), Query Frame = 0
Query:    1 ATTGGADDPGSVRKTGRRDPFPNPKKQELKEEPSVKFLMLNPSVHFDEIVKKARAVVLVGGTMQPTGDLVRQLFSSVESSRVDVFSCGHVIPKENL 96
            A TG + D   V +TG       P+K   +    +KF+MLN +VHF EIV +AR+VVLVGGTMQP   +V QLF  +  SR+DVFSCGHVIP +NL
Sbjct:  575 ALTGCSRDGRIVLETGH-----GPQKGRRQMAAGIKFIMLNAAVHFREIVSEARSVVLVGGTMQPVAPIVAQLFPDLPISRLDVFSCGHVIPPQNL 665          
BLAST of mRNA_H-paniculata_contig14028.2463.1 vs. uniprot
Match: A0A3F2S1D7_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1D7_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.360e-18
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 0
Query:   35 VKFLMLNPSVHFDEIVKKARAVVLVGGTMQPTGDLVRQLFSSVESSRVDVFSCGHVIPKENL 96
            +KF++LNP  HF E+V+K+R+V+L GGTMQP   ++ QLFSSV    VD+FSCGHVIP ENL
Sbjct:  327 IKFILLNPVTHFQEVVEKSRSVILAGGTMQPVSQVIDQLFSSVPKEDVDLFSCGHVIPPENL 388          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14028.2463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPY7_ECTSI2.840e-3174.71Helicase ATP-binding domain-containing protein n=1... [more]
K3W6Y0_GLOUD1.160e-1956.92Helicase ATP-binding domain-containing protein n=1... [more]
A0A662X2D8_9STRA1.580e-1961.29Helicase ATP-binding domain-containing protein n=2... [more]
G4YIN4_PHYSP2.140e-1964.52Helicase ATP-binding domain-containing protein n=1... [more]
W2PPV0_PHYPN4.000e-1961.29Helicase ATP-binding domain-containing protein n=8... [more]
A0A0P1B2J3_PLAHL5.460e-1960.32DNA helicase n=1 Tax=Plasmopara halstedii TaxID=47... [more]
A0A329SYA8_9STRA5.460e-1961.29Putative ATP-dependent DNA helicase n=2 Tax=Phytop... [more]
A0A5D6Y0V7_9STRA1.020e-1858.46Helicase ATP-binding domain-containing protein n=1... [more]
A0A4D9CWW8_9STRA1.020e-1852.08Helicase ATP-binding domain-containing protein n=2... [more]
A0A3F2S1D7_9STRA1.360e-1861.29Helicase ATP-binding domain-containing protein n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028331ATP-dependent RNA helicase CHL1/DDX11PANTHERPTHR11472:SF41ATP-DEPENDENT DNA HELICASE DDX11-RELATEDcoord: 27..96
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 27..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14028contigH-paniculata_contig14028:2454..4424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14028.2463.1mRNA_H-paniculata_contig14028.2463.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14028 2452..4424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14028.2463.1 ID=prot_H-paniculata_contig14028.2463.1|Name=mRNA_H-paniculata_contig14028.2463.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
ATTGGADDPGSVRKTGRRDPFPNPKKQELKEEPSVKFLMLNPSVHFDEIV
KKARAVVLVGGTMQPTGDLVRQLFSSVESSRVDVFSCGHVIPKENL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028331CHL1/DDX11