prot_H-paniculata_contig14028.2462.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14028.2462.1
Unique Nameprot_H-paniculata_contig14028.2462.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length60
Homology
BLAST of mRNA_H-paniculata_contig14028.2462.1 vs. uniprot
Match: D8LPY7_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY7_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 9.000e-25
Identity = 46/52 (88.46%), Postives = 51/52 (98.08%), Query Frame = 0
Query:    9 RGPSGKTFNFTFHRRGTHEQLDELGQLMTNVCRMVPGGVVCFLASYGYLEQV 60
            +GPSGKTFNFTFHRRGT EQLDELG+LMTNVC++VPGGVVCFLASYGYL+QV
Sbjct:  828 KGPSGKTFNFTFHRRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQV 879          
BLAST of mRNA_H-paniculata_contig14028.2462.1 vs. uniprot
Match: A0A835YWY4_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY4_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 3.380e-17
Identity = 36/52 (69.23%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    9 RGPSGKTFNFTFHRRGTHEQLDELGQLMTNVCRMVPGGVVCFLASYGYLEQV 60
            RGPSG  FNFTF +RG+ EQ+DEL +L++NVC +VPGGVVCFL S+GY+EQV
Sbjct:  769 RGPSGGVFNFTFAKRGSPEQMDELCRLLSNVCALVPGGVVCFLPSFGYMEQV 820          
BLAST of mRNA_H-paniculata_contig14028.2462.1 vs. uniprot
Match: A0A433PJN9_9FUNG (ATP-dependent DNA helicase CHL1 n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PJN9_9FUNG)

HSP 1 Score: 68.9 bits (167), Expect = 3.490e-12
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0
Query:   10 GPSGKTFNFTFHRRGTHEQLDELGQLMTNVCRMVPGGVVCFLASYGYLEQV 60
            GPSG    FTF +RG  + + ELGQ + N+CR++P GVVCF ASY YLEQV
Sbjct:  647 GPSGIPLEFTFDKRGDVKLVSELGQTVVNLCRLIPDGVVCFFASYAYLEQV 697          
BLAST of mRNA_H-paniculata_contig14028.2462.1 vs. uniprot
Match: A0A433QTR2_9FUNG (ATP-dependent DNA helicase CHL1 n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QTR2_9FUNG)

HSP 1 Score: 67.8 bits (164), Expect = 8.910e-12
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   10 GPSGKTFNFTFHRRGTHEQLDELGQLMTNVCRMVPGGVVCFLASYGYLEQV 60
            GPS     FTF +R   + +DELGQ++ N+C ++P GVVCF ASY YLEQV
Sbjct:  643 GPSSMPLEFTFEKRSDAKLIDELGQIVVNLCNLIPDGVVCFFASYAYLEQV 693          
BLAST of mRNA_H-paniculata_contig14028.2462.1 vs. uniprot
Match: A0A433DGD7_9FUNG (ATP-dependent DNA helicase CHL1 n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DGD7_9FUNG)

HSP 1 Score: 67.8 bits (164), Expect = 8.910e-12
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   10 GPSGKTFNFTFHRRGTHEQLDELGQLMTNVCRMVPGGVVCFLASYGYLEQV 60
            GPS     FTF +R   + +DELGQ++ N+C ++P GVVCF ASY YLEQV
Sbjct:  699 GPSSMPLEFTFEKRSDAKLIDELGQIVVNLCNLIPDGVVCFFASYAYLEQV 749          
BLAST of mRNA_H-paniculata_contig14028.2462.1 vs. uniprot
Match: A0A388KHF9_CHABU (Helicase ATP-binding domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KHF9_CHABU)

HSP 1 Score: 67.4 bits (163), Expect = 1.220e-11
Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    9 RGPSGKTFNFTFHRRGTHEQLDELGQLMTNVCRMVPGGVVCFLASYGYLEQV 60
            +GP+GK+FNFTF  R + EQ+ ELG+LM N+C +VP G+VCF  S+ Y   V
Sbjct:  619 KGPTGKSFNFTFQSRSSPEQITELGRLMVNLCSIVPQGIVCFFPSFAYETTV 670          
BLAST of mRNA_H-paniculata_contig14028.2462.1 vs. uniprot
Match: UPI00155F115A (ATP-dependent DNA helicase DDX11 n=1 Tax=Etheostoma cragini TaxID=417921 RepID=UPI00155F115A)

HSP 1 Score: 67.0 bits (162), Expect = 1.660e-11
Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   10 GPSGKTFNFTFHRRGTHEQLDELGQLMTNVCRMVPGGVVCFLASYGYLEQV 60
            GPSG+  +FTF  R +   +DE G++++N+C +VPGGVVCFL SY YL ++
Sbjct:  653 GPSGQELDFTFQNRDSPRMMDETGRILSNICNVVPGGVVCFLPSYEYLRRI 703          
BLAST of mRNA_H-paniculata_contig14028.2462.1 vs. uniprot
Match: A0A507EC42_9FUNG (ATP-dependent DNA helicase CHL1 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EC42_9FUNG)

HSP 1 Score: 66.2 bits (160), Expect = 3.100e-11
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   10 GPSGKTFNFTFHRRGTHEQLDELGQLMTNVCRMVPGGVVCFLASYGYLEQV 60
            GP+ K F+F +  R  H  +DELG  + N+C +VPGGVVCF ASY YL++V
Sbjct:  581 GPTKKPFDFKYENRTNHAMIDELGATVANLCTVVPGGVVCFFASYAYLDKV 631          
BLAST of mRNA_H-paniculata_contig14028.2462.1 vs. uniprot
Match: H2UNJ8_TAKRU (Helicase ATP-binding domain-containing protein n=6 Tax=Takifugu TaxID=31032 RepID=H2UNJ8_TAKRU)

HSP 1 Score: 65.9 bits (159), Expect = 4.240e-11
Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    5 LLSYRGPSGKTFNFTFHRRGTHEQLDELGQLMTNVCRMVPGGVVCFLASYGYLEQV 60
            L+   GPSG+  +FTF  R +   +DE G++++N+C +VPGGVVCF  SY YL ++
Sbjct:  648 LVLCNGPSGQELDFTFQNRDSPHMMDETGRILSNICNVVPGGVVCFFPSYEYLRRI 703          
BLAST of mRNA_H-paniculata_contig14028.2462.1 vs. uniprot
Match: A0A6P7MU22_BETSP (ATP-dependent DNA helicase DDX11 n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7MU22_BETSP)

HSP 1 Score: 65.5 bits (158), Expect = 5.800e-11
Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    5 LLSYRGPSGKTFNFTFHRRGTHEQLDELGQLMTNVCRMVPGGVVCFLASYGYLEQV 60
            L+   GPSG+  +FTF  R +   +DE G+++TNVC +VPGGVVCF  SY Y  ++
Sbjct:  649 LILCSGPSGQELDFTFQNRDSPRMMDETGRVLTNVCNVVPGGVVCFFPSYDYSRKI 704          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14028.2462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPY7_ECTSI9.000e-2588.46Helicase ATP-binding domain-containing protein n=1... [more]
A0A835YWY4_9STRA3.380e-1769.23Helicase C-terminal domain-containing protein n=1 ... [more]
A0A433PJN9_9FUNG3.490e-1258.82ATP-dependent DNA helicase CHL1 n=1 Tax=Endogone s... [more]
A0A433QTR2_9FUNG8.910e-1254.90ATP-dependent DNA helicase CHL1 n=1 Tax=Jimgerdema... [more]
A0A433DGD7_9FUNG8.910e-1254.90ATP-dependent DNA helicase CHL1 n=1 Tax=Jimgerdema... [more]
A0A388KHF9_CHABU1.220e-1153.85Helicase ATP-binding domain-containing protein n=1... [more]
UPI00155F115A1.660e-1150.98ATP-dependent DNA helicase DDX11 n=1 Tax=Etheostom... [more]
A0A507EC42_9FUNG3.100e-1152.94ATP-dependent DNA helicase CHL1 n=1 Tax=Powellomyc... [more]
H2UNJ8_TAKRU4.240e-1146.43Helicase ATP-binding domain-containing protein n=6... [more]
A0A6P7MU22_BETSP5.800e-1148.21ATP-dependent DNA helicase DDX11 n=1 Tax=Betta spl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028331ATP-dependent RNA helicase CHL1/DDX11PANTHERPTHR11472:SF41ATP-DEPENDENT DNA HELICASE DDX11-RELATEDcoord: 9..60
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 9..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14028contigH-paniculata_contig14028:407..586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14028.2462.1mRNA_H-paniculata_contig14028.2462.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14028 407..586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14028.2462.1 ID=prot_H-paniculata_contig14028.2462.1|Name=mRNA_H-paniculata_contig14028.2462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
MNHLLLSYRGPSGKTFNFTFHRRGTHEQLDELGQLMTNVCRMVPGGVVCF
LASYGYLEQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028331CHL1/DDX11