prot_H-paniculata_contig14018.2455.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14018.2455.1
Unique Nameprot_H-paniculata_contig14018.2455.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length149
Homology
BLAST of mRNA_H-paniculata_contig14018.2455.1 vs. uniprot
Match: D7G0B9_ECTSI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B9_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 9.310e-87
Identity = 131/147 (89.12%), Postives = 140/147 (95.24%), Query Frame = 0
Query:    1 MERMYMRREMYLSIMMDRGSQGPIIVACPDGGTSIEDLAESNPELILKEKVDMMIGLTDGQAGKIAEHLKLDKDGPSYESGKILLKNMYEMFIARDCTLVEINPLAETPDGRVMACDAKLNFDDNADWRQKDTFQFRDYSQEDSREV 147
            MERMYMRREMYLSIMMDRGSQGP+IVACPDGGTSIEDLAESNPELI+KE+VD+M GLTD QAGKIAEHLKL  DGPSYE+GK LLKNMY MFI RDCTLVEINPLAETP+GRVMACDAKLNFDDNA+WRQKDTFQFRDY+QED+REV
Sbjct:  155 MERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKTLLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREV 301          
BLAST of mRNA_H-paniculata_contig14018.2455.1 vs. uniprot
Match: A0A835YQF4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF4_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.090e-62
Identity = 103/147 (70.07%), Postives = 123/147 (83.67%), Query Frame = 0
Query:    1 MERMYMRREMYLSIMMDRGSQGPIIVACPDGGTSIEDLAESNPELILKEKVDMMIGLTDGQAGKIAEHLKLDKDGPSYESGKILLKNMYEMFIARDCTLVEINPLAETPDGRVMACDAKLNFDDNADWRQKDTFQFRDYSQEDSREV 147
            MER+YMRREMYLSIMMDR  +GP++VAC  GGTSIEDLAE +PEL++K  V +  GLT+ QA KIA+HL+L    P+Y++G  +LKN+YEMFI +DCTLVE+NPLAETPDGRV+ACDAKLNFDDNA +RQKD F  RDYSQED REV
Sbjct:  149 MERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREV 295          
BLAST of mRNA_H-paniculata_contig14018.2455.1 vs. uniprot
Match: A0A7S2Y6L3_9STRA (Succinate-CoA ligase subunit beta n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y6L3_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.020e-53
Identity = 86/148 (58.11%), Postives = 113/148 (76.35%), Query Frame = 0
Query:    1 MERMYMRREMYLSIMMDRGSQGPIIVACPDGGTSIEDLAESNPELILKEKVDMMIGLTDGQAGKIAEHLKLDKDGPSYESGKILLKNMYEMFIARDCTLVEINPLAETPDGRVMACDAKLNFDDNADWRQKDTFQFRDYSQEDSREVC 148
            MERMYMRREMYLSI+MDR SQGP++V  P GGTSIED+A++NPE+I  E + + +GLTD    ++A +L LD+    +     L+KN+Y+MFI  DCT +E+NPLAETP+G ++ CDAK+NFDDNA++RQKD F  RD +QED REV 
Sbjct:   66 MERMYMRREMYLSILMDRASQGPLMVCSPRGGTSIEDVAQTNPEVIFTEPITLEVGLTDEACNRMASNLGLDEGSEGHAKAVTLMKNLYQMFIDSDCTQIEVNPLAETPEGEIVVCDAKVNFDDNAEYRQKDIFARRDTTQEDPREVA 213          
BLAST of mRNA_H-paniculata_contig14018.2455.1 vs. uniprot
Match: A0A7S3XRL5_HETAK (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL5_HETAK)

HSP 1 Score: 181 bits (458), Expect = 9.350e-53
Identity = 90/147 (61.22%), Postives = 113/147 (76.87%), Query Frame = 0
Query:    1 MERMYMRREMYLSIMMDRGSQGPIIVACPDGGTSIEDLAESNPELILKEKVDMMIGLTDGQAGKIAEHLKLDKDGPSYESGKILLKNMYEMFIARDCTLVEINPLAETPDGRVMACDAKLNFDDNADWRQKDTFQFRDYSQEDSREV 147
            MER+YMRREMYLS+M+DRG+QGP++VA P GGTSIED+AE  PELI  + +D+M GLTD QA K+A +L + +  PS+     L+KN+Y MFI  D T VEINPLAET  G VM  DAKLNFDDNA++RQK+   +RD++QED REV
Sbjct:   99 MERVYMRREMYLSLMLDRGTQGPLMVASPCGGTSIEDVAEQTPELIFTQPIDIMEGLTDAQASKMATNLGMVEGSPSHSDAIALMKNLYTMFIETDATQVEINPLAETSTGEVMCADAKLNFDDNAEFRQKEVHAYRDFTQEDPREV 245          
BLAST of mRNA_H-paniculata_contig14018.2455.1 vs. uniprot
Match: A0A485KYE4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KYE4_9STRA)

HSP 1 Score: 180 bits (457), Expect = 2.700e-52
Identity = 94/147 (63.95%), Postives = 114/147 (77.55%), Query Frame = 0
Query:    1 MERMYMRREMYLSIMMDRGSQGPIIVACPDGGTSIEDLAESNPELILKEKVDMMIGLTDGQAGKIAEHLKLDKDGPSYESGKILLKNMYEMFIARDCTLVEINPLAETPDGRVMACDAKLNFDDNADWRQKDTFQFRDYSQEDSREV 147
            MER+YMRREMY SI+MDR SQGP++VA P GGTSIED+A + PELI KE +D+M G TD Q  ++A ++ L+  G S   G  LL N+Y+MFI  D TLVEINPLAETPDG+V ACDAK+NFDDNA +RQKD F  RD +QED+REV
Sbjct:  132 MERVYMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAHATPELIFKENIDIMTGPTDEQLKRLASNMGLE--GVSLTRGVELLGNLYKMFIGVDATLVEINPLAETPDGKVFACDAKINFDDNAAFRQKDIFAKRDKTQEDAREV 276          
BLAST of mRNA_H-paniculata_contig14018.2455.1 vs. uniprot
Match: A0A6T6HZE5_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HZE5_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.310e-51
Identity = 86/147 (58.50%), Postives = 113/147 (76.87%), Query Frame = 0
Query:    1 MERMYMRREMYLSIMMDRGSQGPIIVACPDGGTSIEDLAESNPELILKEKVDMMIGLTDGQAGKIAEHLKLDKDGPSYESGKILLKNMYEMFIARDCTLVEINPLAETPDGRVMACDAKLNFDDNADWRQKDTFQFRDYSQEDSREV 147
            MERMYMRREMYLSI+MDR SQGP++V  P GGT+IED+A+SNPE+I  E +D++ G+   Q  ++A +L L+   PS+E+   L+KN+Y MF   DCT VE+NPLAETP+G V+ CDAK+NFD NA++RQ   F  RD++QEDSREV
Sbjct:  139 MERMYMRREMYLSILMDRASQGPLLVGSPRGGTAIEDIAKSNPEVIFTEPIDIVEGIQQDQCERMATNLGLEAGSPSHENAITLMKNLYSMFTQCDCTQVEVNPLAETPEGDVVVCDAKVNFDSNAEYRQSSIFDKRDFTQEDSREV 285          
BLAST of mRNA_H-paniculata_contig14018.2455.1 vs. uniprot
Match: B7FXA2_PHATC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXA2_PHATC)

HSP 1 Score: 178 bits (452), Expect = 1.690e-51
Identity = 88/147 (59.86%), Postives = 114/147 (77.55%), Query Frame = 0
Query:    1 MERMYMRREMYLSIMMDRGSQGPIIVACPDGGTSIEDLAESNPELILKEKVDMMIGLTDGQAGKIAEHLKLDKDGPSYESGKILLKNMYEMFIARDCTLVEINPLAETPDGRVMACDAKLNFDDNADWRQKDTFQFRDYSQEDSREV 147
            MERMYMRREMYLSI+MDRGSQGP++VA P GGTSIED+A +NPE+I  + +D+  GLT   A ++A +L L++    ++   IL++N+Y MFIA DCT VE+NPLAETP+G ++ CDAK+NFDDNA++RQ   F  RD SQED REV
Sbjct:  135 MERMYMRREMYLSILMDRGSQGPLLVASPRGGTSIEDVAATNPEVIFTQPIDITEGLTPEGAHRMASNLGLEEGSTGHDKAVILMQNLYSMFIACDCTQVEVNPLAETPEGDIVVCDAKVNFDDNAEFRQSSIFARRDTSQEDVREV 281          
BLAST of mRNA_H-paniculata_contig14018.2455.1 vs. uniprot
Match: A0A7S3HRR7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRR7_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.850e-51
Identity = 83/146 (56.85%), Postives = 111/146 (76.03%), Query Frame = 0
Query:    2 ERMYMRREMYLSIMMDRGSQGPIIVACPDGGTSIEDLAESNPELILKEKVDMMIGLTDGQAGKIAEHLKLDKDGPSYESGKILLKNMYEMFIARDCTLVEINPLAETPDGRVMACDAKLNFDDNADWRQKDTFQFRDYSQEDSREV 147
            ERMYMRREMY+SIM+DR + GPI +A P GGTSIED+AE+ PELI K+ +D+ +G+TD  +  +A  L      P++   K +++ +Y++F   DCTL+E+NPLAETPD RV+ CDAK+NFDDNA++RQK+ F FRD SQED REV
Sbjct:    1 ERMYMRREMYISIMLDRAAGGPIFIASPAGGTSIEDVAEATPELIFKQPIDIKVGITDANSTFLATSLGFIPGTPAHTEAKSVVEKLYKLFREHDCTLLEVNPLAETPDNRVVVCDAKINFDDNAEFRQKNVFTFRDRSQEDWREV 146          
BLAST of mRNA_H-paniculata_contig14018.2455.1 vs. uniprot
Match: B8BS06_THAPS (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS06_THAPS)

HSP 1 Score: 177 bits (448), Expect = 3.960e-51
Identity = 86/147 (58.50%), Postives = 112/147 (76.19%), Query Frame = 0
Query:    1 MERMYMRREMYLSIMMDRGSQGPIIVACPDGGTSIEDLAESNPELILKEKVDMMIGLTDGQAGKIAEHLKLDKDGPSYESGKILLKNMYEMFIARDCTLVEINPLAETPDGRVMACDAKLNFDDNADWRQKDTFQFRDYSQEDSREV 147
            MERMYMR EMYLSI+MDR S GP++V  P GGTSIED+A SNPELI  E +D+ +GLT   A ++A ++ L++   S+     L+ N+Y+MF+  DCT VE+NPLAETP+G V+ CDAK+NFDDNA++RQK  F+ RD+SQED REV
Sbjct:  111 MERMYMRNEMYLSILMDRASGGPLLVGSPRGGTSIEDVAHSNPELIFTEPIDINVGLTVEAANRMARNIGLEEGTESHAKAVTLINNLYDMFLGCDCTQVEVNPLAETPEGDVVVCDAKVNFDDNAEFRQKSIFERRDFSQEDPREV 257          
BLAST of mRNA_H-paniculata_contig14018.2455.1 vs. uniprot
Match: A0A1Z5K8M0_FISSO (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8M0_FISSO)

HSP 1 Score: 176 bits (447), Expect = 9.530e-51
Identity = 87/148 (58.78%), Postives = 111/148 (75.00%), Query Frame = 0
Query:    1 MERMYMRREMYLSIMMDRGSQGPIIVACPDGGTSIEDLAESNPELILKEKVDMMIGLTDGQAGKIAEHLKLDKDGPSYESGKILLKNMYEMFIARDCTLVEINPLAETPDGRVMACDAKLNFDDNADWRQKDTFQFRDYSQEDSREVC 148
            MERMYMR EMYLSI+MDR SQGP++VA P GGTSIED+A +NPE+I  + +D+ +GLTD QA ++A +L L+     +     L+KN+Y MFIA DCT VE+NPLAETP G ++ CDAK+NFDDNA++RQ   F  RD +QED REV 
Sbjct:  135 MERMYMRNEMYLSILMDRASQGPLMVASPRGGTSIEDVAATNPEVIFTQPIDITVGLTDEQAQRMAGNLGLEPGSEGHAQAVTLMKNLYNMFIACDCTQVEVNPLAETPSGDIVVCDAKVNFDDNAEFRQTGIFARRDTTQEDPREVA 282          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14018.2455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0B9_ECTSI9.310e-8789.12Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A835YQF4_9STRA1.090e-6270.07Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S2Y6L3_9STRA1.020e-5358.11Succinate-CoA ligase subunit beta n=1 Tax=Amphipro... [more]
A0A7S3XRL5_HETAK9.350e-5361.22Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A485KYE4_9STRA2.700e-5263.95Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A6T6HZE5_9STRA1.310e-5158.50Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
B7FXA2_PHATC1.690e-5159.86Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S3HRR7_9STRA2.850e-5156.85Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
B8BS06_THAPS3.960e-5158.50Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A1Z5K8M0_FISSO9.530e-5158.78Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.470.20coord: 1..143
e-value: 3.7E-52
score: 178.0
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 2..142
IPR013650ATP-grasp fold, succinyl-CoA synthetase-typePFAMPF08442ATP-grasp_2coord: 2..106
e-value: 7.6E-28
score: 97.5
IPR005809Succinate--CoA synthetase, beta subunitPANTHERPTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINcoord: 2..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14018contigH-paniculata_contig14018:1905..6466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14018.2455.1mRNA_H-paniculata_contig14018.2455.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14018 1893..6466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14018.2455.1 ID=prot_H-paniculata_contig14018.2455.1|Name=mRNA_H-paniculata_contig14018.2455.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
MERMYMRREMYLSIMMDRGSQGPIIVACPDGGTSIEDLAESNPELILKEK
VDMMIGLTDGQAGKIAEHLKLDKDGPSYESGKILLKNMYEMFIARDCTLV
EINPLAETPDGRVMACDAKLNFDDNADWRQKDTFQFRDYSQEDSREVC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013650ATP-grasp_succ-CoA_synth-type
IPR005809Succ_CoA_synthase_bsu