prot_H-paniculata_contig13990.2431.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13990.2431.1
Unique Nameprot_H-paniculata_contig13990.2431.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length254
Homology
BLAST of mRNA_H-paniculata_contig13990.2431.1 vs. uniprot
Match: D7G443_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G443_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 3.150e-78
Identity = 125/200 (62.50%), Postives = 149/200 (74.50%), Query Frame = 0
Query:   52 LVFAWSFLGFETTFSIRGRKRRFLRPFSSLGWLAFIYFLLFLLSFAIWILGTWSIAMDMVGNVCRDTNPLLYSFALFLVGAYWMGVFFGLVALFGTLCGKGIQSRAQASMGKAANYAEDRDKAHMLRAEHQLVGSKFDELDREGTGAIDTEEAERLIEELGVGLSSKKLKKAMAILDPGGDGVVTRTDFMSWYKEHGRHG 251
            +VFAWSFLGFET FSIRGRKRRFLRPFSSL ++A +Y LLF +S AIWI GTW+I  D VGN C +  PLLYSF + LV  YW+GV FG V L   L GK IQS AQA++ K   +A++RDK  +L AE QLV  KFD  D EG G ID ++AE LIEELG+GLSSKKLKKAM  LDP G+GVV++ DF+ WY E+G+ G
Sbjct:    1 MVFAWSFLGFETHFSIRGRKRRFLRPFSSLSFVALLYLLLFSMSMAIWIFGTWAIVKDRVGNSCANEVPLLYSFCVALVAVYWVGVVFGAVGLIKVLFGKKIQSGAQATVEKGKQFAQNRDKEQVLEAEQQLVARKFDARDEEGNGTIDRQQAEELIEELGIGLSSKKLKKAMGQLDPAGEGVVSKQDFIEWYAENGQGG 200          
BLAST of mRNA_H-paniculata_contig13990.2431.1 vs. uniprot
Match: A0A7S3HFS1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFS1_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.740e-22
Identity = 66/217 (30.41%), Postives = 115/217 (53.00%), Query Frame = 0
Query:   32 CGYPIDTFVSYAVVSSYLLLLVFAWSFLGFETTFSIR--GRKRRFLRPFSSLGWLAFIYFLLFLLSFAIWILGTWSIAMDMVGNVCRDTNPLLYSFALFLVGAYWMGVFFGLVALFGTLCGKGIQSRAQASMGKAANYAEDRDKAHMLRAEHQLVGSKFDELDREGTGAIDTEEAERLIEELGVGLSSKKLKKAMAILDPGGDGVVTRTDFMSWYKE 246
            CGY +D+F+S AV   YL L+VF+W ++G     S+   G +   L PF SL ++ F YF++ ++SF +W++G+  + + +    C  T P+LY F+LFLV  YW+G    ++ L     G  I     A + K    A   D+      E +L  ++FD+ D E    I  ++   ++E+LGV + +++L+  +A LD    G +     + W+++
Sbjct:   66 CGYALDSFISAAVAVCYLFLMVFSWVYVGDTVILSLPALGIELTLLTPFKSLKYIVFYYFVVAVVSFIVWLVGSVLLQLSVF---CVSTAPVLYQFSLFLVVMYWLGFVITVLYLIKMFFGSNI-----AKIIKETTRASTIDEV-----EEKLFRARFDQYDPEKENRIANDKVPLMLEDLGVFVPAEELETLIATLDEEETGFIEFKPLLHWFRK 269          
BLAST of mRNA_H-paniculata_contig13990.2431.1 vs. uniprot
Match: A0A6T5NSR5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NSR5_HETAK)

HSP 1 Score: 101 bits (252), Expect = 7.000e-22
Identity = 69/242 (28.51%), Postives = 122/242 (50.41%), Query Frame = 0
Query:    4 PALLLTLHCCILSKILQMDVIDRDGDIFCGYPIDTFVSYAVVSSYLLLLVFAWSFLGFETTFSIRGRKRRFLRPFSSLGWLAFIYFLLFLLSFAIWILGTWSIAMDMVGNVCRDTNPLLYSFALFLVGAYWMGVFFGLVALFGTLCGKGIQSRAQASMGKAANYAEDRDKAHMLRAEHQLVGSKFDELDREGTGAIDTEEAERLIEELGVGLSSKKLKKAMAILDPGGDGVVTRTDFMSWYK 245
            PA+   +   + S ++ +  +  D  +    P+D F+  A+  S + LL F W F+G   + +I+GRK   LRPF+++ +L   + L+++ S A W+ G++ +        C +  P LYSF+LF+V  YW+G+  GLV L   +  K I    +  +GK           +   A+   + +KF E D  GT  +  +    L ++ G  LS+ +L++A  +LDP   G +    F+SW++
Sbjct:   43 PAVFANIIVFVGSILVTLSKVYPDEYVCSAQPLDQFLEGAIAISLIFLLCFMWIFIGLPVSINIKGRKWTVLRPFTNIIFLGAAFLLIWVFSLAWWLYGSYMVGAGAWS--CSNNTPALYSFSLFVVVFYWVGLGLGLVHLVVNIFSKQIGEGLK--VGKRL--------VNPALADDDFLLAKFAEYDEGGTEQVARQHLGPLCKDCGRPLSTDELQEARELLDPDQTGFIGADAFLSWFR 272          
BLAST of mRNA_H-paniculata_contig13990.2431.1 vs. uniprot
Match: A0A1I8GUG5_9PLAT (Uncharacterized protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8GUG5_9PLAT)

HSP 1 Score: 53.5 bits (127), Expect = 1.860e-5
Identity = 24/71 (33.80%), Postives = 46/71 (64.79%), Query Frame = 0
Query:  179 AEHQLVGSKFDELDREGTGAIDTEEAERLIEELGVGLSSKKLKKAMAILDPGGDGVVTRTDFMSWYKEHGR 249
            A+ + + + FD  DR+GTG ++ +E E L+  LG  ++ ++++  MA  D   DGV++ ++F+ +YK HG+
Sbjct:    2 ADPESLKAVFDYFDRDGTGTLELDELEELLNALGQCVTKEEVRSIMAADDINSDGVMSLSEFIEFYKRHGK 72          
BLAST of mRNA_H-paniculata_contig13990.2431.1 vs. uniprot
Match: A0A1I8G0Q7_9PLAT (Uncharacterized protein n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8G0Q7_9PLAT)

HSP 1 Score: 53.5 bits (127), Expect = 2.650e-5
Identity = 24/71 (33.80%), Postives = 46/71 (64.79%), Query Frame = 0
Query:  179 AEHQLVGSKFDELDREGTGAIDTEEAERLIEELGVGLSSKKLKKAMAILDPGGDGVVTRTDFMSWYKEHGR 249
            A+ + + + FD  DR+GTG ++ +E E L+  LG  ++ ++++  MA  D   DGV++ ++F+ +YK HG+
Sbjct:    2 ADPESLKAVFDYFDRDGTGTLELDELEELLNALGQCVTKEEVRSIMAADDINSDGVMSLSEFIEFYKRHGK 72          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13990.2431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G443_ECTSI3.150e-7862.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3HFS1_9STRA3.740e-2230.41Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6T5NSR5_HETAK7.000e-2228.51Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1I8GUG5_9PLAT1.860e-533.80Uncharacterized protein n=1 Tax=Macrostomum lignan... [more]
A0A1I8G0Q7_9PLAT2.650e-533.80Uncharacterized protein n=2 Tax=Macrostomum lignan... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 187..245
e-value: 2.6E-10
score: 40.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 215..250
score: 10.971
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 179..214
score: 8.851
NoneNo IPR availableGENE3D1.10.238.10coord: 142..251
e-value: 6.6E-12
score: 47.7
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..253
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..61
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..101
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..20
score: 0.516
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 188..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13990contigH-paniculata_contig13990:1132..3880 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13990.2431.1mRNA_H-paniculata_contig13990.2431.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13990 1132..3880 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13990.2431.1 ID=prot_H-paniculata_contig13990.2431.1|Name=mRNA_H-paniculata_contig13990.2431.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=254bp
PALPALLLTLHCCILSKILQMDVIDRDGDIFCGYPIDTFVSYAVVSSYLL
LLVFAWSFLGFETTFSIRGRKRRFLRPFSSLGWLAFIYFLLFLLSFAIWI
LGTWSIAMDMVGNVCRDTNPLLYSFALFLVGAYWMGVFFGLVALFGTLCG
KGIQSRAQASMGKAANYAEDRDKAHMLRAEHQLVGSKFDELDREGTGAID
TEEAERLIEELGVGLSSKKLKKAMAILDPGGDGVVTRTDFMSWYKEHGRH
GEN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair