prot_H-paniculata_contig13924.2404.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13924.2404.1
Unique Nameprot_H-paniculata_contig13924.2404.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length232
Homology
BLAST of mRNA_H-paniculata_contig13924.2404.1 vs. uniprot
Match: A0A6U2J5U5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2J5U5_HEMAN)

HSP 1 Score: 83.6 bits (205), Expect = 1.930e-15
Identity = 44/122 (36.07%), Postives = 68/122 (55.74%), Query Frame = 0
Query:    1 LADGRVLLDAKLVSRQTVADHFVEEGTQGLHFCRLEPRLDDPPADQGATVELEELHQRTREMADRIMGP---VRSQIVDRYGQMPAGAEPLSLWIASVLPMPVRDRHALLSSTSTMVRLRAC 119
            LADGR  L AK   R T+ + ++E+GTQGLH+C+++   D   A +     LEE      ++   +M     +  +I  +YG  PA +E  S W++S+LP+P  D+H LL+  +T  RL  C
Sbjct:  167 LADGRAHLQAKCRDRFTIKEAWIEDGTQGLHWCKVDLVNDGVSASESERQALEEAVSDCEQLFASVMARSSHLAREIESQYGSRPADSERFSFWLSSILPVPYGDKHCLLTCLNTTERLTLC 288          
BLAST of mRNA_H-paniculata_contig13924.2404.1 vs. uniprot
Match: A0A482RY16_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY16_9ARCH)

HSP 1 Score: 72.0 bits (175), Expect = 2.480e-11
Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = 0
Query:    1 LADGRVLLDAKLVSRQTVADHFVEEGTQGLHFCRLEPRLDDPPADQGATVELEELHQRTREMADRIMGPVRSQIVDR-YGQMPAGAEPLSLWIAS 94
            LADGR LL+  LVSRQ +A+H+VE+GTQGLH+CRLE   DD   +Q    + + L Q+ R +   + G    +++++  G  P   E  SLW+ S
Sbjct:  190 LADGRCLLEGLLVSRQRIAEHYVEQGTQGLHYCRLESLRDDGLGEQRRQ-QADYLSQQLRTLLASLGGGSSRRLLEQGLGSPPQDLENFSLWLLS 283          
BLAST of mRNA_H-paniculata_contig13924.2404.1 vs. uniprot
Match: A0A6V3MPG8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3MPG8_9EUKA)

HSP 1 Score: 67.8 bits (164), Expect = 1.110e-9
Identity = 46/134 (34.33%), Postives = 73/134 (54.48%), Query Frame = 0
Query:    1 LADGRVLLDAKLVSRQTVADHFVEEGTQGLHFCRLEPRLDDPPADQGATVELEEL---HQRTREMADRIMGPVRSQIVDRYGQMPAGAEPL--SLWIASVLPMPVRD---RHALLSSTSTMVRLRACERHLASL 126
            L DGR LL A +  R  V + +VEEGTQGLH+C+  P +++       TV+ EEL   H++   + + + G ++ QIV   G+ P    P+  S W+A+ + M  R      +LL +T T  RL+  +R L+ +
Sbjct:  186 LPDGRALLKATIQKRVKVTNTWVEEGTQGLHYCQFHPYVEEDK-----TVDEEELNAVHKQVNGLFNHVPG-LKDQIVHHIGKQPPLTNPVLWSFWLAAFVTMVSRSGVQSMSLLKTTKTSERLKQSKRLLSQV 313          
BLAST of mRNA_H-paniculata_contig13924.2404.1 vs. uniprot
Match: A0A7S0CSC1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CSC1_9EUKA)

HSP 1 Score: 67.0 bits (162), Expect = 1.970e-9
Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 0
Query:    1 LADGRVLLDAKLVSRQTVADHFVEEGTQGLHFCRLEPRLDDPPADQGATVELEELHQRTREMADRIMGPVRSQIVDRYGQMP--AGAEPLSLWIASVLPMPVRDRHA---LLSSTSTMVRLRACERHLASLDGST 130
            L+DGR LL A LV R  + + +VEEGTQGLH+C+ +   +     + A V+  E+H +   +     G +R QIV+  G+ P  + A   S WI++++ M  R   +   LL +T T  RL+  +  L+ +   T
Sbjct:  183 LSDGRALLKATLVKRVVITNSWVEEGTQGLHYCQYQAYEETDKTVKEADVK--EIHAKVNVILQSAPG-LREQIVNHIGKQPPISNATQFSFWISALVTMITRAGKSGMPLLKTTKTAERLKLVKTVLSQIVSQT 314          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13924.2404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6U2J5U5_HEMAN1.930e-1536.07Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A482RY16_9ARCH2.480e-1142.11RING-type domain-containing protein n=1 Tax=archae... [more]
A0A6V3MPG8_9EUKA1.110e-934.33Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S0CSC1_9EUKA1.970e-933.33Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 1..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13924contigH-paniculata_contig13924:1751..2855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13924.2404.1mRNA_H-paniculata_contig13924.2404.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13924 1751..2855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13924.2404.1 ID=prot_H-paniculata_contig13924.2404.1|Name=mRNA_H-paniculata_contig13924.2404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp
LADGRVLLDAKLVSRQTVADHFVEEGTQGLHFCRLEPRLDDPPADQGATV
ELEELHQRTREMADRIMGPVRSQIVDRYGQMPAGAEPLSLWIASVLPMPV
RDRHALLSSTSTMVRLRACERHLASLDGSTPPAPPSRVPAAVIAEAYEAY
EAARHLGGDEAAAAAAAAAASAAAGAAGAGASVADDSAGGPEQRAGEVEG
GDAGAGRGGGAGVGPAGARGMEEEHEEEEVEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015947PUA-like_sf