prot_H-paniculata_contig13917.2401.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13917.2401.1
Unique Nameprot_H-paniculata_contig13917.2401.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length282
Homology
BLAST of mRNA_H-paniculata_contig13917.2401.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA)

HSP 1 Score: 204 bits (518), Expect = 4.570e-59
Identity = 119/285 (41.75%), Postives = 171/285 (60.00%), Query Frame = 0
Query:    1 MDVDAAYLIAAVEEELFVKLPPEFFPF-SRDIPIVHHLRKSLYGLKQSGRNWNNILDEFLVGIGLDRSTTDSCLYFSRDERGETYLLVAVYVDDLAIAGR-REKVDEFKHGISQRFRMKDLGSVSRVLGTELRRDRPNGIVIISQGRYIREVLKRFDFDECRGVPTSVEGNLKVLAPEGRRVI-SSEYRGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRLFRCLSTAPDLGITFGGKSNGH-GLEGFIDADWAEDVKDRKSITGYVFKLNGGAI 281
            MDV+ AYL + +EE+++VK PP +  + S    +V  LRKSLYGLKQSGRNW+  +D +  G G   S+ D CLY      GE  L++ +YVDDL I    RE V +FKH IS+ F MKDL  +  +LG  ++RDR   ++ ISQ  YI  +L +F   +C+ V T +EG L  +  +G+ V   +EY  +VGSL+YA+  TRPDIA+AV    + ++    E +   KR+ R L    ++G+ + G S G   L G+ DAD+A D  +R+S +GY F L+ G I
Sbjct:   84 MDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKM--DGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEI 365          
BLAST of mRNA_H-paniculata_contig13917.2401.1 vs. uniprot
Match: A0A2Z7AL20_9LAMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AL20_9LAMI)

HSP 1 Score: 198 bits (504), Expect = 2.500e-57
Identity = 114/290 (39.31%), Postives = 173/290 (59.66%), Query Frame = 0
Query:    1 MDVDAAYLIAAVEEELFVKLPPEFFPFSRDIPIVHHLRKSLYGLKQSGRNWNNILDEFLVGIGLDRSTTDSCLYFSRDERGETYLLVAVYVDDLAIAG-RREKVDEFKHGISQRFRMKDLGSVSRVLGTELRRDRPNGIVIISQGRYIREVLKRFDFDECRGVPTSVEGNLKV---LAP--EGRRVISSE--YRGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRLFRCLSTAPDLGITFGGKSNGHGLEGFIDADWAEDVKDRKSITGYVFKLNGGAIS 282
            +DV  A+L   +EEE+++ L PE F  +    +V  L+KSLYGLKQ+ R W    D +++ +G +R + D C YF R   G  Y+++ +YVDD+ +AG  +++V E K  +++ F MKDLG  +++LG ++ RDR N  + +SQ  Y+++ L RF+  + + + T +  N K+   + P  E  R+  S   Y   VGSLM+A   TRPDIA AV   +R M +P RE +ST KR+ R +    +  + FGG      L G++D+D+A D   RKS TGYVF L GGA+S
Sbjct:   92 LDVKTAFLHGDLEEEIYM-LQPEGFAETGKENLVCRLKKSLYGLKQAPRCWYKRFDSYIMSLGYNRLSADPCTYFKRSG-GNDYIILLLYVDDMLVAGPNKDRVQELKAQLAREFDMKDLGPANKILGMQVHRDRSNRKIWLSQTNYLQKFLHRFNMQDSKPISTPLPVNFKLSSDMCPSNEAERMEMSRIPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWSTVKRILRYIKGTSNAALCFGGSYLT--LRGYVDSDYAGDPDKRKSTTGYVFTLAGGAVS 377          
BLAST of mRNA_H-paniculata_contig13917.2401.1 vs. uniprot
Match: A0A6D2KZJ0_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KZJ0_9BRAS)

HSP 1 Score: 196 bits (499), Expect = 1.190e-56
Identity = 113/287 (39.37%), Postives = 169/287 (58.89%), Query Frame = 0
Query:    1 MDVDAAYLIAAVEEELFVKLPPEFFPFSRDIPIVHHLRKSLYGLKQSGRNWNNILDEFLVGIGLDRSTTDSCLYFSRDERGETYLLVAVYVDDLAIAGRR-EKVDEFKHGISQRFRMKDLGSVSRVLGTELRRDRPNGIVIISQGRYIREVLKRFDFDECRGVPTSVEGNLKVLA-PEGRRVISSE---YRGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRLFRCLSTAPDLGITFGGKSNGHGLEGFIDADWAEDVKDRKSITGYVFKLNGGAIS 282
            MDV  A+L   +++EL+++  PE F   +D   V  L+KSLYGLKQS R WN   ++F++G    RS  DSC+Y  + E G  YLL+  YVDD+ +A +   ++ + K  +S  F MKD+G  SR+LG ++RRDR  G++ +SQ  Y+ +V+++F   E + V T + G+ K+ A  E    I +E   Y  +VGS+MYA  GTRPDIAYA+   +  M  P    +   K L R +  + DL + F  K+    ++G+ D+D+A D   RKS +GYVF + G  IS
Sbjct:   14 MDVKTAFLHGDLDQELYME-QPEGFEVDKDKDQVCLLKKSLYGLKQSPRLWNKKFNQFIIGEKFVRSHQDSCVYVKKVESGYMYLLL--YVDDILMAAKDIAEIVKLKSALSSEFEMKDMGPASRILGIDIRRDREAGVLYLSQASYLEKVVQKFKMKEAKSVNTPMGGHFKLSAVTEDSECIDTEKYPYSSVVGSIMYAMIGTRPDIAYAIGLVSMFMSKPGMMHWEAVKWLLRYIKGSSDLEVVF-TKNKNFNIQGYCDSDFAGDRDKRKSTSGYVFTVGGNTIS 296          
BLAST of mRNA_H-paniculata_contig13917.2401.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 205 bits (522), Expect = 2.260e-56
Identity = 120/291 (41.24%), Postives = 168/291 (57.73%), Query Frame = 0
Query:    1 MDVDAAYLIAAVEEELFVKLPPEFFPFSRDIPIVHHLRKSLYGLKQSGRNWNNILDEFLVGIGLDRSTTDSCLYFSRDERGETYLLVAVYVDDLAIAGRREKVDEFKHGISQRFRMKDLGSVSRVLGTELRRDRPNGIVIISQGRYIREVLKRFDFDECRGV-----PTSVEGNLKVLAPEGRRVISS----EYRGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRLFRCLSTAPDLGITFGGKSNGHGLEGFIDADWAEDVKDRKSITGYVFKLNGGAIS 282
            MDV +AYL   +EE ++++LPP F P  +   +V  L+K+LYGLKQ+GR W   L   +  +G  R   D  +++ R+  GE+ ++VA  VDDL I G  + VD F   I QRF M DLG +  +LG E+RRDR    + ISQ  YI  ++ RF+ DE   +     P S  GN +  +P   R         YR  VGSLMYA+ GTRPDI +AV   ++ M++P R  +   KR+ R L  + +L + +G  +N  GL G+ DADW    + R SI+GYVF L+GGAIS
Sbjct: 1140 MDVKSAYLNGILEETVYMRLPPGFAPPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQ--SPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAIS 1423          
BLAST of mRNA_H-paniculata_contig13917.2401.1 vs. uniprot
Match: A0A146H7K8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H7K8_MYCCL)

HSP 1 Score: 195 bits (496), Expect = 2.550e-56
Identity = 110/290 (37.93%), Postives = 170/290 (58.62%), Query Frame = 0
Query:    1 MDVDAAYLIAAVEEELFVKLPPEFFPFSRDIPIVHHLRKSLYGLKQSGRNWNNILDEFLVGIGLDRSTTDSCLYFSRDERGETYLLVAVYVDDLAI-AGRREKVDEFKHGISQRFRMKDLGSVSRVLGTELRRDRPNGIVIISQGRYIREVLKRFDFDECRGVPTSV--EGNLKVL-----APEGRRVISSEYRGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRLFRCLSTAPDLGITFGGKSNGHGLEGFIDADWAEDVKDRKSITGYVFKLNGGAIS 282
            MD+  AYL   ++EE++++ PP F         V  L+KS+YGL QSGR+WN   D  +  +GL ++  D+C+Y+ R+  GE  + V V+VDDL I A  +++ +  +  +   F MKD+G   +++G E+ RDR  G V +SQ  YI  +L R+ F     V T +  + N K+      AP     + +EY+ M+G LMYA+  TRPDIAYAV + ++   +P  E  + CKR+FR LS   + G+ +G + +G   EG+ DAD+A ++ DRKSI+GY + L G A +
Sbjct:    1 MDIRGAYLNGELKEEVYMRQPPGF---EDGTGRVWRLKKSIYGLHQSGRDWNREFDRKVQSVGLTKTAADNCVYY-RERDGEQ-VWVTVWVDDLIILATSKDEGERVRKELGTLFEMKDMGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSNLNAVSTPLVPDANTKMRQLPKDAPPAAPSVRAEYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFRYLSGTRNYGLVYGPQRDGVVFEGYCDADYAANLDDRKSISGYAYMLAGAAFA 285          
BLAST of mRNA_H-paniculata_contig13917.2401.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT)

HSP 1 Score: 199 bits (507), Expect = 4.400e-56
Identity = 106/278 (38.13%), Postives = 165/278 (59.35%), Query Frame = 0
Query:    1 MDVDAAYLIAAVEEELFVKLPPEFFPFSRD-IPIVHHLRKSLYGLKQSGRNWNNILDEFLVGIGLDRSTTDSCLYFSRDERGETYLLVAVYVDDLAIAGRR-EKVDEFKHGISQRFRMKDLGSVSRVLGTELRRDRPNGIVIISQGRYIREVLKRFDFDECRGVPTSVEGNLKVLAPEGRRVISSEYRGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRLFRCLSTAPDLGITFGGKSNGHGLEGFIDADWAEDVKDRKSITGYVFKL 276
            MDV  A+L   ++ E+F++ P  F   S + + +V+ L+KSLYGLKQSGRNWN +LDE+L+  G  R+  D C+Y  + + GE  ++V ++VDDL IA    +K+ +FK  +  +FRMKDLG +S  LG   ++   NG++ ++Q RYI+++L RF   +C+   T  E   + ++ +  +V    YR +VGSL+Y  T TRPDI++ V + ++++  P  ED  T K + R L  + +  + F        L  + DADWA  + DR S TGY F L
Sbjct:  279 MDVKTAFLHVPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFIRNPVDHCVY--QKQTGEDIIIVVIWVDDLIIASSNTDKISQFKENMKSKFRMKDLGEISYFLGISFKQG--NGVIKMNQKRYIQKILDRFGMSDCKPRTTPCEQRFEGMS-DSEQVDPRRYREIVGSLIYLMTCTRPDISWVVSKLSQKLSCPRLEDLVTAKHVLRYLKGSMEHELCFRKCDGELNLIAYTDADWASSLDDRHSTTGYCFSL 551          
BLAST of mRNA_H-paniculata_contig13917.2401.1 vs. uniprot
Match: A0A1J3F7G4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3F7G4_NOCCA)

HSP 1 Score: 204 bits (519), Expect = 5.550e-56
Identity = 116/287 (40.42%), Postives = 170/287 (59.23%), Query Frame = 0
Query:    1 MDVDAAYLIAAVEEELFVKLPPEFFPFSRDIPIVHHLRKSLYGLKQSGRNWNNILDEFLVGIGLDRSTTDSCLYFSRDERGETYLLVAVYVDDLAIAGRR-EKVDEFKHGISQRFRMKDLGSVSRVLGTELRRDRPNGIVIISQGRYIREVLKRFDFDECRGVPTSVEGNLKVLA-PEGRRVISSE---YRGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRLFRCLSTAPDLGITFGGKSNGHGLEGFIDADWAEDVKDRKSITGYVFKLNGGAIS 282
            MDV  A+L   +++ELF++  PE F   +D   V  L+KSLYGLKQS R WN   ++F+ G    RS  DSC+Y  + E G  YLL+  YVDD+ IA +   ++D  K  +S  F MKD+G+ SR+LG +++RDR  G++ +SQ  Y+ +V+KRF+  E + V T + G+ K+ A  E    I +E   Y   VGS+MYA  GTRPDIAYA+   +R M  P    +   K L R +    DL + F  K+    ++G+ D+D+A D+  R+S +GYVF + G  +S
Sbjct:  950 MDVKTAFLHGDLDQELFME-QPEGFEVDKDKDQVCLLKKSLYGLKQSPRLWNKKFNQFITGEKFIRSHQDSCVYVKKVEGGYVYLLL--YVDDMLIAAKEMAEIDRLKSALSSEFEMKDMGAASRILGIDIKRDRKEGVLYLSQSSYLEKVVKRFNMGEAKSVNTPIGGHFKLSAVKEVSECIDTEKYPYSSAVGSVMYAMIGTRPDIAYAIGLISRFMSKPGIMHWEAVKWLLRYIRGTADLNLVF-TKNKNFSVQGYCDSDFAGDLDRRRSTSGYVFTVGGNTVS 1232          
BLAST of mRNA_H-paniculata_contig13917.2401.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.270e-55
Identity = 117/283 (41.34%), Postives = 169/283 (59.72%), Query Frame = 0
Query:    1 MDVDAAYLIAAVEEELFVKLPPEFFPFSRDI-PIVHHLRKSLYGLKQSGRNWNNILDEFLVGIGLDRSTTDSCLYFSRDERGETYLLVAVYVDDLAIAGR-REKVDEFKHGISQRFRMKDLGSVSRVLGTELRRDRPNGIVIISQGRYIREVLKRFDFDECRGVPTSVEGNLKVLAPEGRRVI-SSEYRGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRLFRCLSTAPDLGITFGGKSNGH-GLEGFIDADWAEDVKDRKSITGYVFKLNGG 279
            MDVD AYL + +EE++++K PP +  +  +   +V  LRKSLYGLKQSGRNW+  +D +  G GL  S  D CLY      GE  L++ +YVDDL I    R   D+FK  IS+ F MKDL  +  +LG  ++R+R N  + ISQ  YI  +L +F   +C+ V T +EG L  +  +G+ V   +EY  +VGSL+YA+  TRPDIA+AV    + ++   +E +   KR+ R L    D+G+ + G S G   L G+ DAD+A D  +R+S +GY F L+ G
Sbjct:  304 MDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEGTLTKM--DGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHG 583          
BLAST of mRNA_H-paniculata_contig13917.2401.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 193 bits (490), Expect = 1.980e-55
Identity = 110/289 (38.06%), Postives = 166/289 (57.44%), Query Frame = 0
Query:    1 MDVDAAYLIAAVEEELFVKLPPEFF----PFSRDIPIVHHLRKSLYGLKQSGRNWNNILDEFLVGIGLDRSTTDSCLYFSRDERGETYLLVAVYVDDLAIAGR-REKVDEFKHGISQRFRMKDLGSVSRVLGTELRRDRPNGIVIISQGRYIREVLKRFDFDECRGVPTSVEGNLKVLAPEGRRVISSEY--RGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRLFRCLSTAPDLGITFGGKSNGHGLEGFIDADWAEDVKDRKSITGYVFKLNGGAIS 282
            +DVD A+L   VEEEL++  P  F     P  + +     L ++LYG KQ+ R WN+ L++ L G G  RS  D C+Y  R +    + ++ VYVDDL I  R + ++ E K  + + F +K+LG +   LG E+ R+R +  ++++Q  YI+ + ++F  ++C+ V T  + N K++ P    V    Y  R +VG+LMY +T TRPDIA AV + A+  E   +  +   KR+ + L T  DLG+ F G + G  L G+ DA WA D+  R+S TGYVF LNG AIS
Sbjct:    6 VDVDTAFLYGDVEEELYMDQPDGFEDQVNPTKKCL-----LMQALYGTKQAARQWNSKLNKHLEGQGFHRSAADPCVYVRRSD--SKFSIIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKPAEDEVFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADASWAGDLDTRRSTTGYVFFLNGSAIS 286          
BLAST of mRNA_H-paniculata_contig13917.2401.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 199 bits (506), Expect = 2.000e-55
Identity = 111/285 (38.95%), Postives = 170/285 (59.65%), Query Frame = 0
Query:    1 MDVDAAYLIAAVEEELFVKLPPEFFPFSRDIPIVHHLRKSLYGLKQSGRNWNNILDEFLVGIGLDRSTTDSCLYFSRDERGETYLLVAVYVDDLAIAGRRE-KVDEFKHGISQRFRMKDLGSVSRVLGTELRRDRPNGIVIISQGRYIREVLKRFDFDECRGVPTSVEGN--LKVLAPEGRRVISSEYRGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRLFRCLSTAPDLGITFGGKSNGHGLEGFIDADWAEDVKDRKSITGYVFKLNGGAIS 282
            MDV  A+L   ++EE+++K    F    ++  +V  LR+S+YGLKQS R WN++LD  L  +G  ++T D C+Y  ++E GE ++ +AVYVDD+ +AG+ + K++E K  ++++F+MKD+G +   LG ++     +  + I Q  Y + VL+RF  +  +   T V     LK  A + +RV    Y+  VG L+Y ST TRPDIAYAV   AR   DP  E +   KR+ R L+   D+G+ + G        G+ DADWA D+ DRKS +GYVF+++  AIS
Sbjct:   92 MDVTTAFLNGDLKEEVYMKQTEGFIEKGKE-HLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEIFI-IAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAIS 373          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13917.2401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TCB8_9STRA4.570e-5941.75Gag-pol polyprotein n=3 Tax=Nannochloropsis gadita... [more]
A0A2Z7AL20_9LAMI2.500e-5739.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6D2KZJ0_9BRAS1.190e-5639.37Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8RWY5_9APHY2.260e-5641.24Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A146H7K8_MYCCL2.550e-5637.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7HLY2_PARCT4.400e-5638.13Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1J3F7G4_NOCCA5.550e-5640.42Retrovirus-related Pol polyprotein from transposon... [more]
W7TJ26_9STRA1.270e-5541.34Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
H3GB17_PHYRM1.980e-5538.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9KES8_PARCT2.000e-5538.95Retrovirus-related Pol poly from transposon TNT 1-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..165
e-value: 3.8E-36
score: 125.0
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 34..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13917contigH-paniculata_contig13917:4636..5562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13917.2401.1mRNA_H-paniculata_contig13917.2401.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13917 4636..5562 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13917.2401.1 ID=prot_H-paniculata_contig13917.2401.1|Name=mRNA_H-paniculata_contig13917.2401.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp
MDVDAAYLIAAVEEELFVKLPPEFFPFSRDIPIVHHLRKSLYGLKQSGRN
WNNILDEFLVGIGLDRSTTDSCLYFSRDERGETYLLVAVYVDDLAIAGRR
EKVDEFKHGISQRFRMKDLGSVSRVLGTELRRDRPNGIVIISQGRYIREV
LKRFDFDECRGVPTSVEGNLKVLAPEGRRVISSEYRGMVGSLMYASTGTR
PDIAYAVHQAARRMEDPCREDFSTCKRLFRCLSTAPDLGITFGGKSNGHG
LEGFIDADWAEDVKDRKSITGYVFKLNGGAIS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2