prot_H-paniculata_contig13912.2400.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13912.2400.1
Unique Nameprot_H-paniculata_contig13912.2400.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1051
Homology
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BLAST of mRNA_H-paniculata_contig13912.2400.1 vs. uniprot
Match: D8LLR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR2_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 7.620e-22
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0 
Query:  904 GLIAVAKYEYMAQGTEQLSFRVGDIVQLHTDQVNAKGWGLGQANGKFGWFPGDFVEMRQT 963
            G +AVAKYEY+AQG EQLSFRVGDIVQLHT+++NAKGWGLGQANGK GWFPGDFVEMR T
Sbjct: 1486 GRVAVAKYEYVAQGPEQLSFRVGDIVQLHTEKINAKGWGLGQANGKVGWFPGDFVEMRPT 1545
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BLAST of mRNA_H-paniculata_contig13912.2400.1 vs. uniprot
Match: A0A6H5JEL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL9_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 3.550e-16
Identity = 45/55 (81.82%), Postives = 50/55 (90.91%), Query Frame = 0 
Query:  917 GTEQLSFRVGDIVQLHTDQVNAKGWGLGQANGKFGWFPGDFVEMRQTSTVDRKSR 971
            G EQLSFRVGDIVQLHTD++NAKGWGLGQANGK GWFPGDFVEMR T + +RK+R
Sbjct: 1729 GPEQLSFRVGDIVQLHTDKINAKGWGLGQANGKVGWFPGDFVEMRPTPS-ERKAR 1782
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BLAST of mRNA_H-paniculata_contig13912.2400.1 vs. uniprot
Match: A0A8C9RAP0_SCLFO (Guanine nucleotide exchange factor VAV3-like n=8 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RAP0_SCLFO)

HSP 1 Score: 58.5 bits (140), Expect = 7.200e-5
Identity = 24/54 (44.44%), Postives = 38/54 (70.37%), Query Frame = 0 
Query:  906 IAVAKYEYMAQGTEQLSFRVGDIVQLHTDQVNAKGWGLGQANGKFGWFPGDFVE 959
            IA+A+Y+Y A+ T +LS    D+V+++T ++ A GW  G+ NG+ GWFP  +VE
Sbjct:  785 IAIARYDYSARDTRELSLAEDDVVKIYT-KLGANGWWKGEVNGRVGWFPSTYVE 837
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13912.2400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLR2_ECTSI7.620e-2285.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEL9_9PHAE3.550e-1681.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8C9RAP0_SCLFO7.200e-544.44Guanine nucleotide exchange factor VAV3-like n=8 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainSMARTSM00326SH3_2coord: 905..962
e-value: 3.2E-12
score: 56.6
IPR001452SH3 domainPFAMPF00018SH3_1coord: 908..954
e-value: 8.6E-9
score: 34.9
IPR001452SH3 domainPROSITEPS50002SH3coord: 902..963
score: 20.13
NoneNo IPR availableGENE3D2.30.30.40coord: 905..995
e-value: 3.3E-15
score: 57.7
NoneNo IPR availablePANTHERPTHR14167SH3 DOMAIN-CONTAININGcoord: 185..972
IPR036028SH3-like domain superfamilySUPERFAMILY50044SH3-domaincoord: 898..977

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13912contigH-paniculata_contig13912:560..6356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13912.2400.1mRNA_H-paniculata_contig13912.2400.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13912 58..6356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13912.2400.1 ID=prot_H-paniculata_contig13912.2400.1|Name=mRNA_H-paniculata_contig13912.2400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1051bp
MHEAVTSVSSDDDGSGAWGSGSDDGSSGSDDVEAGATAGEEGRVAARRSS
SKKDLRLDLQDDDGEWSNYCTWQGPNSRAPSSVQARETSLAIRRPSDGGV
GPHHKVWTSNAGNNNSNVAIVDSNVNASSGGGVGVLGFPQHPSPLTPKAS
DLMTSTPTRGGGGEGTGKQYPVDAQATAGGSSSSSVSHAASEAAQHSRRH
SGNGGREVVESAAAAMTAGAAAGSVQHSRRHSATSSGGGGEGMNGEGSGG
GSFQHGRRYSAGSSGSGGGAGGSGGVSTEEGGRSSRRNSGSGERSYAEAT
AQGPVQSSRRNSATNTSDSTAQRTERGEGDRRRRQNASPSTPPTATELSS
SASSPQMRTGRDVWGGKGGGSNAVGADQADRNSPPAKPPDSAASHRGRPR
RGDGGDELMLPAELPGLGSARTTFSTRGDASTEAVGISEFDTLAPGGSSR
LTSAPQGQDITALGKIQQHRMDLSTSLSLRRERTHPPPLPPRRDMYYDPA
EGSGSGENSSVVSPPPLPPRHGSSAMDLAAGGGGGAGIGSASSRPGVGSP
PLLVEAPGSPLVSGGRAAVPGSAGPPSQRGVSGGTGMTPSVSTGSLSGAG
SSGAAAAGTPAGGRPTPSRRRNLREKRSAVAGDPHHLSTSSPLQPSPRLI
KGGFGPAAPQAWTGAAVAEANASSAAAVPASVNRKRVVSGGGSANPGAGS
TSAATTAGTPGRSRIGTGGSGGVGMPAGGGGSSGSLAADYKTPGRSGLGG
GGVTTANATAASAATPQPRKHHRAVSQGVVPSSAPAPVPRIGTSASPSAS
RRSTRVAAAAGGGGAAGGAAGGAAGTTSGIAGAAATRVAAGAAAGGAAGS
GWGVAVAGGVGAAAGATANTTWTGTGTASAVETAVAGTATGAPAAAPAAG
TGTGLIAVAKYEYMAQGTEQLSFRVGDIVQLHTDQVNAKGWGLGQANGKF
GWFPGDFVEMRQTSTVDRKSRPSASQTKPASSRPRKSSQPQSARNSTAAA
AAAAGSTAAAGTGAGTGGGGGGSSAGTTQARGESRGSPPPPPYPGRNVCT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR036028SH3-like_dom_sf