prot_H-paniculata_contig1391.2395.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1391.2395.1
Unique Nameprot_H-paniculata_contig1391.2395.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length680
Homology
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BLAST of mRNA_H-paniculata_contig1391.2395.1 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 7.700e-21
Identity = 62/173 (35.84%), Postives = 93/173 (53.76%), Query Frame = 0 
Query:  478 LRLKLAGSGKLGCSAGGKKKREIVADDDQQVAALR-CPHADCRLRKECRLDPGSMSEHLAVHMRKAAEQQITRAYVRSTVAELLHELCTDVAVARREPTCVRRHTTSTLFGRTDQRLGFSAAMLETKVLGDIGNPAIRRCTSEIAFGSCEGVGSSDQIVRCDTCGAWSHVYCG 649
            + ++ AG  +LG  A  +++R  +  +++ V+  + CP  DC +     +    M+ HL  H + A E+     Y+RS+VAE+LHE+C D  V R +    RR  +  L       +G  A M+ET V GD  +P +RRC  ++A G CEG+     IVRCD C AW HV CG
Sbjct:  398 ITIERAGKRRLGVPA--EERRTKLGGENETVSPFQGCPIHDCPMGSSDGISVSWMARHLESHTKVAMEKPQKELYIRSSVAEILHEMCLDSEVPRAQRKFERRKMSRALLDTPRAGIGHLAGMIETVVTGDNKSPHVRRCAHDLAVGGCEGITREGTIVRCDKCMAWYHVSCG 568
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BLAST of mRNA_H-paniculata_contig1391.2395.1 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 2.360e-17
Identity = 61/173 (35.26%), Postives = 89/173 (51.45%), Query Frame = 0 
Query:  478 LRLKLAGSGKLGCSAGGKKKREIVADDDQQVAALR-CPHADCRLRKECRLDPGSMSEHLAVHMRKAAEQQITRAYVRSTVAELLHELCTDVAVARREPTCVRRHTTSTLFGRTDQRLGFSAAMLETKVLGDIGNPAIRRCTSEIAFGSCEGVGSSDQIVRCDTCGAWSHVYCG 649
            + ++ AG  +LG  A  +++R ++  +++ V+  R CP  DC +     +    M+ HL  H + A EQ     Y+RS+VAE+LHE+C D  V R +    RR     L       +G  A ++ET V GD  +P +R    E   G CEG+     IVRCD C AW HV CG
Sbjct:  378 ITIERAGKRRLGVPA--EERRMMLGGENETVSPFRGCPIHDCPMGSSDGISVSWMARHLESHTKVAMEQPQKELYIRSSVAEILHEMCLDSEVPRAQRKFERRKMARALLDTPRAGIGHLAGVMETMVTGDNKDPHVRHEPQE---GXCEGITREGTIVRCDKCMAWYHVSCG 545
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1391.2395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQA3_ECTSI7.700e-2135.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L313_9PHAE2.360e-1735.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 616..654

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1391contigH-paniculata_contig1391:10467..16596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1391.2395.1mRNA_H-paniculata_contig1391.2395.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1391 8012..16596 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1391.2395.1 ID=prot_H-paniculata_contig1391.2395.1|Name=mRNA_H-paniculata_contig1391.2395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=680bp
MADLGDMADQLLQAASQLSPLPKTSGSSSSRARREHGRDDSLRGGRGRSL
PLQPGRSTATTVQDEPDSTRSIVRRRGNSRTPSSASLSIAQGVTNGSLRS
VANRGDAPQQTLMAARHGDHHGHGHQHQHQHRHQQGRVQPPTGGSVDSDR
TSSYFAEKSVGSSTDRGRDRDSERDNSHHRSNGYNNKNYDAPRRSSYDGG
GNRSRSSSPAYSGLDIQGHGSVMDNKRSSGGGEWHSSGICRSSSAEGGED
INGIGDGKEHGWQNSFGGGTVLDEQNRGNGTTASEAFESQLRRPRSDCGS
DIGGASGGGSEERANELILVDSNSGEEEQQNTIGAHKQDEQQQQHCTSQK
PPHSPPLPPPTRRHVSPCRRLSAQSDGSLASGSSSGSGVDSSTARESSTS
SPPPQAKVSRQALEERRSSTTNTTNTNVNNNNNNNNTDTDTDTNTTNNNN
ATIGVSVTPANIVTEALPVSREAVKATLRLKLAGSGKLGCSAGGKKKREI
VADDDQQVAALRCPHADCRLRKECRLDPGSMSEHLAVHMRKAAEQQITRA
YVRSTVAELLHELCTDVAVARREPTCVRRHTTSTLFGRTDQRLGFSAAML
ETKVLGDIGNPAIRRCTSEIAFGSCEGVGSSDQIVRCDTCGAWSHVYCGG
VSIGGTVEPVIGWSHSTHPNALASEVSQCS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD