prot_H-paniculata_contig139.2389.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig139.2389.1
Unique Nameprot_H-paniculata_contig139.2389.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length295
Homology
BLAST of mRNA_H-paniculata_contig139.2389.1 vs. uniprot
Match: D8LHS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS6_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 4.790e-79
Identity = 133/233 (57.08%), Postives = 158/233 (67.81%), Query Frame = 0
Query:   58 LDHLLDDPELLRMEQARVERIQADASRLAQLRKLGFGLHLEVAERIIEETVIGQFRGAGVIAHFYDPDSAFGASLDLFLESKAGLYMGTRFIRCRVRPGAAVASRMRVKRVPALACYKGGIRVAYTEDMAQLGSQEGVDHGAVGRWLDASAALESDPPSLCALEDMTYRGCVGRSRTGRNLDSDSEDDDDSGGVSWRYDCGVEGCSKPFEHNHISANCGADGGTGGGGLPEDF 290
            LD+LLDDPE+ RM Q RVE + ADA+RL  LR LGFGLH+EV E  +EE   GQFRGAGV+ H YD DS  GASLDL LE+KAG YMGTRF+RCR+ P +AVA+ MR++RVPALACYKGG+R AYTE ++Q G+ +GVD GAV RWL AS  LE DPP   AL +    G VG          D  D DD      RYDCG++GC K F+H+H  A        GGGGLP+ F
Sbjct:  150 LDYLLDDPEITRMAQMRVEAMHADATRLQNLRALGFGLHIEVPESGVEEASRGQFRGAGVVLHLYDADSELGASLDLLLEAKAGSYMGTRFVRCRLGPESAVAATMRIRRVPALACYKGGVRTAYTEQLSQFGNSDGVDPGAVERWLVASGTLEFDPPDANALCEGGGLGVVG----------DDGDGDDEESAEARYDCGLDGCHKAFKHDHFLA-------AGGGGLPKGF 365          
BLAST of mRNA_H-paniculata_contig139.2389.1 vs. uniprot
Match: A0A7S2SM94_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SM94_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.190e-11
Identity = 59/211 (27.96%), Postives = 92/211 (43.60%), Query Frame = 0
Query:   64 DPELLRMEQARVERIQADASRLAQLRKLGFGLHLEVAERIIEETVIGQFRGAGVIAHFYDPDSAFGASLDLFLESKAGLYMGTRFIRCRVRPGAAVASRMRVKRVPA---LACYKGGIRVAYTEDMAQLGSQEGVDHGAVGRWLDASAALESDPPSLCALEDMTYRGCVGRSRTGRNLDSDSEDDDDSGGVSWRYDCGVEGCSKPFEHNHI 271
            DPE+ R++  R   ++  A      R  G+G+H  V+E    E +   +    V+ H  D      A LDL LE  A  + GT FIRC  +P   ++  + V+       LA  K G   A  E++AQ G  E +    + +WL  +  L +  P     E + ++G V  +    N +               +DCGV GC+K F+H H+
Sbjct:  176 DPEMRRIDTMRRAELRRTAEHHHLARSRGYGVHRAVSEG---EAIAIAYERPLVVLHVCDDRKMRSARLDLELERIAHRFPGTTFIRCVSQPRGLLSQILGVRTQAVEGMLAALKYGDVAAVVENLAQFGDNEYLASDLLDQWLQHTGVLSATLPEP---EALLFQGQVVATEAPINSEI--------------FDCGVAGCTKRFQHEHV 366          
BLAST of mRNA_H-paniculata_contig139.2389.1 vs. uniprot
Match: A0A7S2LDL9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LDL9_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.850e-11
Identity = 69/245 (28.16%), Postives = 104/245 (42.45%), Query Frame = 0
Query:   59 DHLLDD--PELL-RMEQARVERIQADASRLAQLRKLGFGLHLEV-AERIIE------ETVIGQFRGAGVIAHFYDPDSAFGASLDLFLESKAGLYMGTRFIRCRVRPGAAVASRM----------RVKRVPALACYKGGIRVAYTEDMAQLGSQEGVDHGAVGRWLDASAALESDPPSL---CALEDMTYRGCVGRSRTGRNLDSDSEDDDDSGGVSWRYDCGVEGCSKPFEHNHISANCGADGG 280
            D+LLDD  P L    E  R   ++  A R   L   G+G+H ++  +R+        +T+    R  G + H +D  S    +LDL+LE  A  Y GT+F+R     G  VAS +          +   +P L   + G  VA+   +    S   ++   V +WLD +  L   PPSL   C +            +  R  D   E+++       RY+CGV GC K F+H H+     A  G
Sbjct:  161 DYLLDDDVPGLSSEYENQRRAELENLAQRAEILHHHGYGVHRQMHPQRVFAAAGYGTDTMRDVVRPKGSVIHLFDAFSQRSVALDLYLERIAAKYPGTKFVR-----GIGVASILYADGNGDDAWKKGDLPMLLAVREGKVVAWNAGLKDFFSSADLETRVVEQWLDRAGVLFESPPSLDEICRIRPEETALLENMMKLNRLGDGGLEEEE-------RYNCGVAGCCKSFQHEHVGVKTEAQNG 393          
BLAST of mRNA_H-paniculata_contig139.2389.1 vs. uniprot
Match: E1ZJ51_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJ51_CHLVA)

HSP 1 Score: 57.8 bits (138), Expect = 5.830e-6
Identity = 41/143 (28.67%), Postives = 72/143 (50.35%), Query Frame = 0
Query:   63 DDPELLRMEQARVERIQADASRLAQLRKLGFGLHLEVAE-RIIEETVIGQFRGAGVIAHFYDPDSAFGASLDLFLESKAGLYMGTRFIRCRVRPGAAVASRMRVKRVPALACYKGGIRVAYTEDMAQLGSQEGVDHGAVGRWL 204
            +D EL R++  R++++Q +A R AQL+++G G   +V E R++ E    +     ++ H     S     LD  L   A  ++GTRF+R  +   + +  R+R    P L C++ G  V     + + G+ E +   AV +WL
Sbjct:   92 EDEELGRLQAQRLQQMQREAERKAQLQQVGHGGLADVPESRLLREA---ESSAVPLVCHVAFEGSPLDDELDEHLVRLAHQHLGTRFVRTLINLRSTLHLRLRSPPGPGLLCFRAGSLVG-AAGLDRFGAPECIQEEAVDKWL 230          
BLAST of mRNA_H-paniculata_contig139.2389.1 vs. uniprot
Match: L1J644_GUITC (Thioredoxin domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1J644_GUITC)

HSP 1 Score: 54.3 bits (129), Expect = 5.660e-5
Identity = 37/151 (24.50%), Postives = 71/151 (47.02%), Query Frame = 0
Query:   61 LLDDPELLRMEQARVERIQADASRLAQLRKLGFGLHLEVAERIIEETVIGQFRGAGVIAHFYDPDSAFGASLDLFLESKAGLYMGTRFIRCRVRPGAAVASRMRVKRVPALACYKGGIRVAYTEDMAQLGSQEGVDHGAVGRWLDASAALE 211
            LLDD +L  +   R++ ++ +A R  + ++LG G +  VAE    + V G      V+ HF+  D      +D  L + A  Y+  +FIR           ++++K +P +  +KGGI +       +LG  +  +   + + L + A ++
Sbjct:   52 LLDDDDLDSLHMQRLQELKLEAQRRDEQKRLGHGQYRLVAEPEFLKEVTGS---ENVVCHFFCDDFIRCKIVDKHLGAIARKYVEAKFIRVSAPDAPFFVQKLKIKVLPCIVMFKGGIAIDRVVGFEELGGVDDFEQIKLEKRLASKAMIQ 199          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig139.2389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LHS6_ECTSI4.790e-7957.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SM94_9STRA1.190e-1127.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2LDL9_9STRA1.850e-1128.16Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
E1ZJ51_CHLVA5.830e-628.67Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
L1J644_GUITC5.660e-524.50Thioredoxin domain-containing protein n=2 Tax=Gemi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 87..216
e-value: 2.2E-8
score: 36.1
NoneNo IPR availablePANTHERPTHR21148PHOSDUCIN-RELATEDcoord: 43..242
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 37..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig139contigH-paniculata_contig139:5034..44098 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig139.2389.1mRNA_H-paniculata_contig139.2389.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig139 4859..44204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig139.2389.1 ID=prot_H-paniculata_contig139.2389.1|Name=mRNA_H-paniculata_contig139.2389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=295bp
MLPMCHNQDYPALEKARKVTPVVGLESHAGKPGIDTRYRRTNTSDHDDGD
EDDDDDDLDHLLDDPELLRMEQARVERIQADASRLAQLRKLGFGLHLEVA
ERIIEETVIGQFRGAGVIAHFYDPDSAFGASLDLFLESKAGLYMGTRFIR
CRVRPGAAVASRMRVKRVPALACYKGGIRVAYTEDMAQLGSQEGVDHGAV
GRWLDASAALESDPPSLCALEDMTYRGCVGRSRTGRNLDSDSEDDDDSGG
VSWRYDCGVEGCSKPFEHNHISANCGADGGTGGGGLPEDFEMPF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf