prot_H-paniculata_contig13812.2340.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13812.2340.1
Unique Nameprot_H-paniculata_contig13812.2340.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length805
Homology
BLAST of mRNA_H-paniculata_contig13812.2340.1 vs. uniprot
Match: D8LP19_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP19_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 9.450e-96
Identity = 271/460 (58.91%), Postives = 306/460 (66.52%), Query Frame = 0
Query:    1 MMLTSDSNGKAIGVPVPLMLALVERVQRMTPVVNKRQHGPQAFIPVAQGALSHGALHLIHPALELAAYRLLEALASTPPPTVLRNGRRFCRTLATGPGGPSLAPPSSLRAAGYRAISKATLQLGPAATPHLAVNVLPTLLAEARAVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---GMKVEPAMSARKSSQXXXXXSREKEVGRALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGANVAPWEAACGALSCLTQVVLTCGGYLPLGSRLAVEDVLHRGLRVLARVG-VSGGSGGRXXXXXXRGRVWGVAVSGCLPLENPRVVREFVTLAQACLVTPLADGTRSGALSVAVAAFRAFRAHPHQDLATASQLALAGCGALLYPRTAPLHLPDAVTNQARTWGSSVGNDHGSQDASYTGLPLGWGGVLDATDTTSEGEGIED 456
            +MLT DSNG+ + VPV L+LALVERVQRM   V K Q GPQ FIPVAQGALSHGAL  I P+L LAA RLL ALA+T   TVLR  RRFCR L  G   PS A   SLRAAGYRA+S+A LQLG  A P+LA   LP +LAE R+ VA      XXXXXXXXXXX                      GM +EPAMSARKSSQ XXXX              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    A +A  +A C  LSCL++VV+ C G+LPLG RLAVE+VLHRGL +L+  G  + GS G  XXXXX           C  LE+PRV REF+ LA ACL+TPLADGTRSG+LSVA+AAFR+F +HP Q LA ASQ ALAGCGA+LYPR APLHLP AVT+QAR WG S  +  G       GLP+GWG  L      +EGE  E+
Sbjct:  314 LMLTGDSNGRPVAVPVGLILALVERVQRMVSSVVKGQ-GPQVFIPVAQGALSHGALSTIRPSLGLAASRLLHALATTEASTVLRIARRFCRALVQGMAKPSDA--GSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVRSAVAASEPEAXXXXXXXXXXXSVEFVAATGAPGVAAVGGGSKKGMGIEPAMSARKSSQKXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTGAAALAEEQAVCAGLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELLSHAGGAAKGSRGDGXXXXXXXXXXXXXXRRCARLEDPRVAREFLGLAHACLMTPLADGTRSGSLSVAIAAFRSFASHPDQRLAAASQQALAGCGAVLYPRAAPLHLPHAVTSQARAWGGSSASSTGR------GLPMGWGDTL----MVAEGESAEE 747          
BLAST of mRNA_H-paniculata_contig13812.2340.1 vs. uniprot
Match: A0A6H5JJU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU2_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 1.040e-86
Identity = 226/461 (49.02%), Postives = 261/461 (56.62%), Query Frame = 0
Query:    1 MMLTSDSNGKAIGVPVPLMLALVERVQRMTPVVNKRQHGPQAFIPVAQGALSHGALHLIHPALELAAYRLLEALASTPPPTVLRNGRRFCRTLATGPGGPSLAPPSSLRAAGYRAISKATLQLGPAATPHLAVNVLPTLLAEARAVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGMKVEPAMSARKSSQXXXXXSREKEVGRALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGANVAPWEAACGALSCLTQVVLTCGGYLPLGSRLAVEDVLHRGLRVLARV-GVSGGSGGRXXXXXXRGRVWGVAVSG----CLPLENPRVVREFVTLAQACLVTPLADGTRSGALSVAVAAFRAFRAHPHQDLATASQLALAGCGALLYPRTAPLHLPDAVTNQARTWGSSVGNDHGSQDASYTGLPLGWGGVLDATDTTSEGEGIED 456
            +MLT DSNG+ + VPV L+LALVERVQRM   V K Q GPQ FIPVAQGALSHGAL +I P+L LAA RLL ALA+T   TVLRN RRFCR L  G G PS A   SLRAAGYRA+S+A LQLG  A P+LA   LP +LAE RA VA                                        EP                                                    XXXXXXXXXX    ++  +A C  LSCL++VV+ C G+LPLG RLAVE+VLHRGL +L+   G + GS G XXXXXX G       SG    C PLE+PRV REF  LA ACL+TPLADGTRSG+LSVA+AAFR+  +H  + LA ASQ ALAGCGA+LYPR APLHLP AVT+QAR WG S  +  G       GLP+GWG  L      +EGE  E+
Sbjct:  404 LMLTGDSNGRPVAVPVGLILALVERVQRMVSSVVKGQ-GPQVFIPVAQGALSHGALSVIRPSLGLAASRLLHALATTEASTVLRNARRFCRALVQGMGKPSDA--GSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVRAAVAAS--------------------------------------EPEXXX------------------------------------------------XXXXXXXXXXXXXALSEEQAVCAGLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELLSHAAGAAKGSRGNXXXXXXXG------ASGEGRRCAPLEDPRVAREFFGLAHACLMTPLADGTRSGSLSVAIAAFRSLASHSDERLAAASQQALAGCGAILYPRAAPLHLPHAVTSQARAWGGSSASSTGR------GLPMGWGDTL----MVAEGESAEE 759          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13812.2340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LP19_ECTSI9.450e-9658.91Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JJU2_9PHAE1.040e-8649.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34105FAMILY NOT NAMEDcoord: 1..695

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13812contigH-paniculata_contig13812:239..6412 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13812.2340.1mRNA_H-paniculata_contig13812.2340.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13812 203..6480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13812.2340.1 ID=prot_H-paniculata_contig13812.2340.1|Name=mRNA_H-paniculata_contig13812.2340.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=805bp
MMLTSDSNGKAIGVPVPLMLALVERVQRMTPVVNKRQHGPQAFIPVAQGA
LSHGALHLIHPALELAAYRLLEALASTPPPTVLRNGRRFCRTLATGPGGP
SLAPPSSLRAAGYRAISKATLQLGPAATPHLAVNVLPTLLAEARAVVAAS
DSSSAGPNSAAPAVAGGGSEEAVRSNRTVGGGGSGMKVEPAMSARKSSQK
KQRRSREKEVGRALAAADAAAAAAAANGAGAGSSAGSGGLSGGGVGGGDR
GGEGANVAPWEAACGALSCLTQVVLTCGGYLPLGSRLAVEDVLHRGLRVL
ARVGVSGGSGGRGDGGGGRGRVWGVAVSGCLPLENPRVVREFVTLAQACL
VTPLADGTRSGALSVAVAAFRAFRAHPHQDLATASQLALAGCGALLYPRT
APLHLPDAVTNQARTWGSSVGNDHGSQDASYTGLPLGWGGVLDATDTTSE
GEGIEDAAVDMDNSDDAESASRSKVAHVHSNTSHDHHNHHLQQQQQQQDG
NHIKSSSPPAVVVSGQVSLSPSSMGQHRSESRSGTASVSAPLATATVVTP
RPSETNPPCNQSPSSSSSFLLHGRGATSSSSSSSSSSSLPTTSLSHTTAL
VIKPAAVDMVVDQEARGRKYDDGALLEDDEEGEEEESGVDESRSKGKGKK
GKGKGKGKGKRKARRGISVMQCSSSGGVIDDNDAAEDEDEDEDEDGGGGG
SFYRGRGIVDGARERRTVEGGEAGEQVSPRKKRSRNSDVDQNATAAAAAA
VVTVATEAEEEKSRRHGGSSLVPGGDEEDEDQDDDDDDAFDFPCIVDADP
DEED*
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